Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is cshA [H]

Identifier: 148652953

GI number: 148652953

Start: 1403100

End: 1404650

Strand: Direct

Name: cshA [H]

Synonym: PsycPRwf_1147

Alternate gene names: 148652953

Gene position: 1403100-1404650 (Clockwise)

Preceding gene: 148652952

Following gene: 148652954

Centisome position: 47.1

GC content: 49.0

Gene sequence:

>1551_bases
ATGTCAAACTTAGACACTCTTTTAGACAATGCCGCAAACGAAGTAGACGGTATCACCACCACTCAAGATTTAAACGATAA
GACCCATCCTAACAGCGAAGTAGACACTGAAGATAAAGTGACCTTTGTTGACCTAGAATTGGCGCCAGAGCTACTTGAAG
CATTAACTTCAAGCGGTTACAAGCACCCAACACCTATTCAAGCCCTGTCTATCCCGCCAGCACTAGCCGGCCGTGATTTA
TTGCTATCTGCCCAAACCGGTAGTGGTAAGACAGCCGCTTTCGTACTACCTATGCTGGATAAAATCATTCGTGATAAAGC
CACCAATAAAGTGGTACATACCGTAATTTTGACCCCAACACGTGAGCTTGCTAACCAAGTGAGTGATAGCGTACGTCAAT
ACAGCTCAAAAACCCGCAATATCTTCAGTGTGCCTCTTGTGGGCGGCGCCCCTTACGGTGGTCAGATTCGTGCGCTAAAT
AAAGGCGTTCAAGTGATTATCGCCACACCAGGACGCTTTATCGATCACATGAATTCAGGCCGTATCGATTTATCTGAATT
AGATATTCTAATTCTTGATGAAGCCGATCGCATGCTTGACATGGGTTTTGCTGAAGACATCGAAAAAGTCATGAAAGCGG
CACCAAAAAATCGTCAAACCATTATGTGTTCAGCCACTTGGGATGGCCCGGTAGGCAAAATTGCCGCCAGCTTCACCAAC
AACCCTGAACGTATCGATATCAAAGCTGAGACCAAGCACATTGATGAGTCGGTATATTACGCTGATGATTTTAATCATAA
AAACCGTATCTTAGATAACCTATTAACTCAAAAAGATGTGAACCAAGCGATCATCTTTGCTGCCACCAAGCGCAGCTGTG
AGACATTGGCTAAGAGCTTAAAAGAGCAAGGCCATAAAGCCAGCTTCCTACATGGCGACTTACCACAGGCCAAACGTAGC
CGCATCATTAATGATGTAAAAGCAGGTAAGATTACCATCCTAGTGGCAACTGATGTCGCTGCCCGTGGTATTGATGTTAG
TGGTATTACGCACGTATTCAACTACGACTTACCACGTCAAACAGAAGACTACGTGCATCGCATCGGTCGTAGTGGTCGTG
CCGGCCGTACCGGTATCGCTATCAACATCTGTAGCATTGATGACCGTGCACAGCTTGATGCCATTAACCGTTATCTAAAA
CGTACCATGTCGGTTGAAGAAATCGAGGGTATGGAGCCTAAGAAAAACACCAAAGACATGCACGTCGGCACAGCAGCCAA
ACGTGGTCGTGGTGGCAATCGCCGTGGTGGCCCAGGCGCGGGTAACCGTCGTGGTGGTAATGGTGGCGGCGGCTACCGTG
GTAAGTCTGCTGACAATGCCAGCGGTGAAAAACGTGGCGCAGGCGCTGGTCGTCCTAGTGGCAAACCTGCCGGTCGCCGC
TTCGGTGGTAAACCTACCGGTGCAAGCGCTGGCAAACCAGGTGGCCAACGCCGCAGTGGACCAGCTCGCTCAGGTGAAGG
CCGTCCAGCCCGCCGTAGCAGCAATGGCTAA

Upstream 100 bases:

>100_bases
AACGCTTATCTGTGTTGTGCCTTATAACTTTAACTGTTTCACTACTTGCCCTCAGCATTGGCAGGATACTCAGTGGCAGT
ATTTAAATGGACACACATTT

Downstream 100 bases:

>100_bases
TTAAATAGCTGATTAAATGGCTAGTTAATGGGTTCACTCTCATTAACTGCCAATAAAAAAGACCAACTTTAACGAGTTGG
TCTTTTTTTATGCCTGAATG

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MSNLDTLLDNAANEVDGITTTQDLNDKTHPNSEVDTEDKVTFVDLELAPELLEALTSSGYKHPTPIQALSIPPALAGRDL
LLSAQTGSGKTAAFVLPMLDKIIRDKATNKVVHTVILTPTRELANQVSDSVRQYSSKTRNIFSVPLVGGAPYGGQIRALN
KGVQVIIATPGRFIDHMNSGRIDLSELDILILDEADRMLDMGFAEDIEKVMKAAPKNRQTIMCSATWDGPVGKIAASFTN
NPERIDIKAETKHIDESVYYADDFNHKNRILDNLLTQKDVNQAIIFAATKRSCETLAKSLKEQGHKASFLHGDLPQAKRS
RIINDVKAGKITILVATDVAARGIDVSGITHVFNYDLPRQTEDYVHRIGRSGRAGRTGIAINICSIDDRAQLDAINRYLK
RTMSVEEIEGMEPKKNTKDMHVGTAAKRGRGGNRRGGPGAGNRRGGNGGGGYRGKSADNASGEKRGAGAGRPSGKPAGRR
FGGKPTGASAGKPGGQRRSGPARSGEGRPARRSSNG

Sequences:

>Translated_516_residues
MSNLDTLLDNAANEVDGITTTQDLNDKTHPNSEVDTEDKVTFVDLELAPELLEALTSSGYKHPTPIQALSIPPALAGRDL
LLSAQTGSGKTAAFVLPMLDKIIRDKATNKVVHTVILTPTRELANQVSDSVRQYSSKTRNIFSVPLVGGAPYGGQIRALN
KGVQVIIATPGRFIDHMNSGRIDLSELDILILDEADRMLDMGFAEDIEKVMKAAPKNRQTIMCSATWDGPVGKIAASFTN
NPERIDIKAETKHIDESVYYADDFNHKNRILDNLLTQKDVNQAIIFAATKRSCETLAKSLKEQGHKASFLHGDLPQAKRS
RIINDVKAGKITILVATDVAARGIDVSGITHVFNYDLPRQTEDYVHRIGRSGRAGRTGIAINICSIDDRAQLDAINRYLK
RTMSVEEIEGMEPKKNTKDMHVGTAAKRGRGGNRRGGPGAGNRRGGNGGGGYRGKSADNASGEKRGAGAGRPSGKPAGRR
FGGKPTGASAGKPGGQRRSGPARSGEGRPARRSSNG
>Mature_515_residues
SNLDTLLDNAANEVDGITTTQDLNDKTHPNSEVDTEDKVTFVDLELAPELLEALTSSGYKHPTPIQALSIPPALAGRDLL
LSAQTGSGKTAAFVLPMLDKIIRDKATNKVVHTVILTPTRELANQVSDSVRQYSSKTRNIFSVPLVGGAPYGGQIRALNK
GVQVIIATPGRFIDHMNSGRIDLSELDILILDEADRMLDMGFAEDIEKVMKAAPKNRQTIMCSATWDGPVGKIAASFTNN
PERIDIKAETKHIDESVYYADDFNHKNRILDNLLTQKDVNQAIIFAATKRSCETLAKSLKEQGHKASFLHGDLPQAKRSR
IINDVKAGKITILVATDVAARGIDVSGITHVFNYDLPRQTEDYVHRIGRSGRAGRTGIAINICSIDDRAQLDAINRYLKR
TMSVEEIEGMEPKKNTKDMHVGTAAKRGRGGNRRGGPGAGNRRGGNGGGGYRGKSADNASGEKRGAGAGRPSGKPAGRRF
GGKPTGASAGKPGGQRRSGPARSGEGRPARRSSNG

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4758138, Length=364, Percent_Identity=37.3626373626374, Blast_Score=256, Evalue=4e-68,
Organism=Homo sapiens, GI38201710, Length=465, Percent_Identity=35.0537634408602, Blast_Score=254, Evalue=1e-67,
Organism=Homo sapiens, GI148613856, Length=342, Percent_Identity=39.766081871345, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI41327771, Length=385, Percent_Identity=37.4025974025974, Blast_Score=252, Evalue=6e-67,
Organism=Homo sapiens, GI45446747, Length=355, Percent_Identity=37.1830985915493, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI45446743, Length=355, Percent_Identity=37.1830985915493, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI224593278, Length=368, Percent_Identity=37.7717391304348, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI222352149, Length=383, Percent_Identity=37.3368146214099, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI13518015, Length=367, Percent_Identity=35.9673024523161, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI262231852, Length=367, Percent_Identity=35.9673024523161, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI216548263, Length=367, Percent_Identity=35.9673024523161, Blast_Score=244, Evalue=2e-64,
Organism=Homo sapiens, GI262118318, Length=367, Percent_Identity=35.9673024523161, Blast_Score=243, Evalue=4e-64,
Organism=Homo sapiens, GI169881239, Length=364, Percent_Identity=36.8131868131868, Blast_Score=242, Evalue=7e-64,
Organism=Homo sapiens, GI13514809, Length=364, Percent_Identity=36.8131868131868, Blast_Score=242, Evalue=7e-64,
Organism=Homo sapiens, GI164664518, Length=379, Percent_Identity=35.8839050131926, Blast_Score=242, Evalue=7e-64,
Organism=Homo sapiens, GI301171467, Length=365, Percent_Identity=36.4383561643836, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI87196351, Length=365, Percent_Identity=36.4383561643836, Blast_Score=240, Evalue=3e-63,
Organism=Homo sapiens, GI301171475, Length=365, Percent_Identity=36.4383561643836, Blast_Score=239, Evalue=3e-63,
Organism=Homo sapiens, GI20149629, Length=358, Percent_Identity=37.9888268156425, Blast_Score=235, Evalue=8e-62,
Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=32.9048843187661, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI55749865, Length=416, Percent_Identity=33.6538461538462, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI41327773, Length=355, Percent_Identity=36.9014084507042, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI13129006, Length=404, Percent_Identity=33.4158415841584, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI7661920, Length=385, Percent_Identity=34.025974025974, Blast_Score=218, Evalue=8e-57,
Organism=Homo sapiens, GI188035877, Length=372, Percent_Identity=34.6774193548387, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI31542656, Length=384, Percent_Identity=34.8958333333333, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI21071032, Length=354, Percent_Identity=35.3107344632768, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI4758112, Length=364, Percent_Identity=32.6923076923077, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI18375623, Length=364, Percent_Identity=32.6923076923077, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI41327776, Length=356, Percent_Identity=34.8314606741573, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI21040371, Length=364, Percent_Identity=32.6923076923077, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI51094101, Length=369, Percent_Identity=31.1653116531165, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI164419743, Length=369, Percent_Identity=31.1653116531165, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI6005743, Length=371, Percent_Identity=32.6145552560647, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI8922886, Length=371, Percent_Identity=32.0754716981132, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI13514831, Length=382, Percent_Identity=31.151832460733, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI41327779, Length=396, Percent_Identity=32.0707070707071, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=33.2439678284182, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI4503529, Length=375, Percent_Identity=32.2666666666667, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI83700235, Length=374, Percent_Identity=31.8181818181818, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI62241022, Length=353, Percent_Identity=32.5779036827195, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI256223453, Length=384, Percent_Identity=28.6458333333333, Blast_Score=176, Evalue=6e-44,
Organism=Homo sapiens, GI62241024, Length=332, Percent_Identity=32.5301204819277, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI38327634, Length=368, Percent_Identity=31.25, Blast_Score=169, Evalue=6e-42,
Organism=Homo sapiens, GI38569505, Length=384, Percent_Identity=29.1666666666667, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI38569503, Length=390, Percent_Identity=28.7179487179487, Blast_Score=166, Evalue=6e-41,
Organism=Homo sapiens, GI9506931, Length=427, Percent_Identity=29.2740046838407, Blast_Score=165, Evalue=8e-41,
Organism=Homo sapiens, GI17505907, Length=432, Percent_Identity=29.1666666666667, Blast_Score=158, Evalue=9e-39,
Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=30.3303303303303, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI154759257, Length=420, Percent_Identity=27.8571428571429, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI256773275, Length=377, Percent_Identity=28.3819628647215, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI9966805, Length=322, Percent_Identity=28.8819875776398, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI20336298, Length=216, Percent_Identity=35.1851851851852, Blast_Score=117, Evalue=2e-26,
Organism=Escherichia coli, GI1787016, Length=442, Percent_Identity=39.1402714932127, Blast_Score=301, Evalue=6e-83,
Organism=Escherichia coli, GI87082221, Length=378, Percent_Identity=43.3862433862434, Blast_Score=294, Evalue=8e-81,
Organism=Escherichia coli, GI1790214, Length=423, Percent_Identity=38.7706855791962, Blast_Score=268, Evalue=7e-73,
Organism=Escherichia coli, GI1787605, Length=355, Percent_Identity=38.5915492957746, Blast_Score=254, Evalue=9e-69,
Organism=Escherichia coli, GI1788930, Length=370, Percent_Identity=39.7297297297297, Blast_Score=253, Evalue=2e-68,
Organism=Caenorhabditis elegans, GI71987143, Length=371, Percent_Identity=36.6576819407008, Blast_Score=246, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI115533224, Length=428, Percent_Identity=34.3457943925234, Blast_Score=241, Evalue=8e-64,
Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=38.0434782608696, Blast_Score=240, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=38.0434782608696, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI71995514, Length=368, Percent_Identity=38.0434782608696, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI71995718, Length=370, Percent_Identity=36.7567567567568, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI17555296, Length=351, Percent_Identity=37.8917378917379, Blast_Score=238, Evalue=6e-63,
Organism=Caenorhabditis elegans, GI17552114, Length=403, Percent_Identity=33.7468982630273, Blast_Score=234, Evalue=6e-62,
Organism=Caenorhabditis elegans, GI32565321, Length=375, Percent_Identity=37.0666666666667, Blast_Score=234, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17552642, Length=424, Percent_Identity=35.8490566037736, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17510559, Length=414, Percent_Identity=32.6086956521739, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI17537549, Length=362, Percent_Identity=36.7403314917127, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17507121, Length=364, Percent_Identity=34.6153846153846, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=34.8901098901099, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17507881, Length=379, Percent_Identity=34.5646437994723, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=34.3163538873995, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17507945, Length=370, Percent_Identity=32.7027027027027, Blast_Score=204, Evalue=7e-53,
Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=34.4919786096257, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71982858, Length=355, Percent_Identity=32.3943661971831, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI86570094, Length=349, Percent_Identity=36.1031518624642, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI193208216, Length=396, Percent_Identity=32.8282828282828, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI71999644, Length=353, Percent_Identity=32.2946175637394, Blast_Score=188, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI71999646, Length=353, Percent_Identity=32.2946175637394, Blast_Score=188, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17536103, Length=384, Percent_Identity=33.59375, Blast_Score=186, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17536101, Length=384, Percent_Identity=33.59375, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI115532548, Length=454, Percent_Identity=29.295154185022, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17536099, Length=384, Percent_Identity=33.59375, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17509811, Length=376, Percent_Identity=31.3829787234043, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI115532546, Length=401, Percent_Identity=29.426433915212, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI193206561, Length=361, Percent_Identity=30.7479224376731, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI71990816, Length=431, Percent_Identity=28.538283062645, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17505370, Length=362, Percent_Identity=31.2154696132597, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17556951, Length=366, Percent_Identity=29.2349726775956, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17508543, Length=404, Percent_Identity=28.7128712871287, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17553716, Length=371, Percent_Identity=29.6495956873315, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=423, Percent_Identity=26.7139479905437, Blast_Score=141, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI25148291, Length=327, Percent_Identity=29.0519877675841, Blast_Score=139, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI17507641, Length=383, Percent_Identity=28.1984334203655, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71997889, Length=450, Percent_Identity=27.7777777777778, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI32564046, Length=370, Percent_Identity=27.5675675675676, Blast_Score=124, Evalue=9e-29,
Organism=Caenorhabditis elegans, GI71982862, Length=202, Percent_Identity=30.6930693069307, Blast_Score=114, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71987152, Length=109, Percent_Identity=45.8715596330275, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI25145561, Length=385, Percent_Identity=23.8961038961039, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=40.5633802816901, Blast_Score=262, Evalue=9e-71,
Organism=Saccharomyces cerevisiae, GI6325138, Length=358, Percent_Identity=38.5474860335196, Blast_Score=258, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6324778, Length=413, Percent_Identity=35.5932203389831, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6321360, Length=374, Percent_Identity=37.4331550802139, Blast_Score=241, Evalue=3e-64,
Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=37.5647668393782, Blast_Score=239, Evalue=7e-64,
Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=36.3888888888889, Blast_Score=239, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=37.037037037037, Blast_Score=229, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6320224, Length=384, Percent_Identity=33.3333333333333, Blast_Score=226, Evalue=6e-60,
Organism=Saccharomyces cerevisiae, GI6324620, Length=374, Percent_Identity=33.9572192513369, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6320449, Length=367, Percent_Identity=33.5149863760218, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6320173, Length=450, Percent_Identity=30.2222222222222, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6322912, Length=376, Percent_Identity=34.0425531914894, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6322323, Length=376, Percent_Identity=34.0425531914894, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6320119, Length=380, Percent_Identity=32.3684210526316, Blast_Score=192, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6323947, Length=341, Percent_Identity=34.0175953079179, Blast_Score=185, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6321963, Length=387, Percent_Identity=34.1085271317829, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6319714, Length=424, Percent_Identity=28.7735849056604, Blast_Score=176, Evalue=6e-45,
Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=31.1977715877437, Blast_Score=171, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6321111, Length=364, Percent_Identity=31.3186813186813, Blast_Score=167, Evalue=5e-42,
Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=31.8840579710145, Blast_Score=166, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321267, Length=365, Percent_Identity=34.5205479452055, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6320400, Length=372, Percent_Identity=32.258064516129, Blast_Score=165, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6324366, Length=421, Percent_Identity=27.790973871734, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6323306, Length=320, Percent_Identity=28.125, Blast_Score=121, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6321374, Length=431, Percent_Identity=23.4338747099768, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6322876, Length=197, Percent_Identity=31.4720812182741, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21355075, Length=350, Percent_Identity=40.5714285714286, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI18857967, Length=473, Percent_Identity=35.0951374207188, Blast_Score=251, Evalue=1e-66,
Organism=Drosophila melanogaster, GI28574962, Length=390, Percent_Identity=36.4102564102564, Blast_Score=251, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=37.5358166189112, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24644479, Length=367, Percent_Identity=37.874659400545, Blast_Score=248, Evalue=6e-66,
Organism=Drosophila melanogaster, GI24644487, Length=367, Percent_Identity=37.874659400545, Blast_Score=248, Evalue=7e-66,
Organism=Drosophila melanogaster, GI45551833, Length=367, Percent_Identity=37.874659400545, Blast_Score=248, Evalue=7e-66,
Organism=Drosophila melanogaster, GI24644485, Length=367, Percent_Identity=37.874659400545, Blast_Score=248, Evalue=7e-66,
Organism=Drosophila melanogaster, GI24644483, Length=367, Percent_Identity=37.874659400545, Blast_Score=248, Evalue=7e-66,
Organism=Drosophila melanogaster, GI281361218, Length=367, Percent_Identity=37.874659400545, Blast_Score=248, Evalue=8e-66,
Organism=Drosophila melanogaster, GI24644481, Length=367, Percent_Identity=37.874659400545, Blast_Score=248, Evalue=8e-66,
Organism=Drosophila melanogaster, GI24583279, Length=359, Percent_Identity=36.4902506963788, Blast_Score=237, Evalue=1e-62,
Organism=Drosophila melanogaster, GI24583281, Length=359, Percent_Identity=36.4902506963788, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24584994, Length=374, Percent_Identity=36.6310160427808, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24662330, Length=346, Percent_Identity=37.5722543352601, Blast_Score=233, Evalue=3e-61,
Organism=Drosophila melanogaster, GI21356161, Length=370, Percent_Identity=37.2972972972973, Blast_Score=233, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24645031, Length=380, Percent_Identity=35.5263157894737, Blast_Score=231, Evalue=7e-61,
Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=34.3007915567282, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=35.4107648725212, Blast_Score=224, Evalue=9e-59,
Organism=Drosophila melanogaster, GI24585582, Length=412, Percent_Identity=33.9805825242718, Blast_Score=224, Evalue=2e-58,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.1123595505618, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI28575014, Length=372, Percent_Identity=34.9462365591398, Blast_Score=218, Evalue=8e-57,
Organism=Drosophila melanogaster, GI281365720, Length=348, Percent_Identity=35.0574712643678, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=34.5205479452055, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=34.5205479452055, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=34.5205479452055, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=34.5205479452055, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI17136814, Length=351, Percent_Identity=33.3333333333333, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24581954, Length=356, Percent_Identity=31.4606741573034, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24581952, Length=356, Percent_Identity=31.4606741573034, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24581956, Length=356, Percent_Identity=31.4606741573034, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI17647335, Length=363, Percent_Identity=32.5068870523416, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24666101, Length=369, Percent_Identity=30.0813008130081, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24643725, Length=411, Percent_Identity=27.4939172749392, Blast_Score=171, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24642822, Length=392, Percent_Identity=30.8673469387755, Blast_Score=166, Evalue=5e-41,
Organism=Drosophila melanogaster, GI28571808, Length=358, Percent_Identity=30.1675977653631, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI28571809, Length=358, Percent_Identity=30.1675977653631, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI28571338, Length=404, Percent_Identity=28.4653465346535, Blast_Score=158, Evalue=1e-38,
Organism=Drosophila melanogaster, GI18859659, Length=404, Percent_Identity=28.4653465346535, Blast_Score=158, Evalue=1e-38,
Organism=Drosophila melanogaster, GI21355559, Length=381, Percent_Identity=29.6587926509186, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24668515, Length=323, Percent_Identity=29.4117647058824, Blast_Score=152, Evalue=7e-37,
Organism=Drosophila melanogaster, GI19920478, Length=378, Percent_Identity=26.4550264550265, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI17136666, Length=402, Percent_Identity=25.6218905472637, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24640164, Length=388, Percent_Identity=25, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI20130173, Length=330, Percent_Identity=27.2727272727273, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24646066, Length=372, Percent_Identity=25.2688172043011, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 55429; Mature: 55298

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MSNLDTLLDNAANEVDGITTTQDLNDKTHPNSEVDTEDKVTFVDLELAPELLEALTSSGY
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCC
KHPTPIQALSIPPALAGRDLLLSAQTGSGKTAAFVLPMLDKIIRDKATNKVVHTVILTPT
CCCCCCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCH
RELANQVSDSVRQYSSKTRNIFSVPLVGGAPYGGQIRALNKGVQVIIATPGRFIDHMNSG
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCEEEEECCCHHHHCCCCC
RIDLSELDILILDEADRMLDMGFAEDIEKVMKAAPKNRQTIMCSATWDGPVGKIAASFTN
CEEHHHCCEEEECCCHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCC
NPERIDIKAETKHIDESVYYADDFNHKNRILDNLLTQKDVNQAIIFAATKRSCETLAKSL
CCCEEEEEEHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
KEQGHKASFLHGDLPQAKRSRIINDVKAGKITILVATDVAARGIDVSGITHVFNYDLPRQ
HHCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECHHHCCCCCCCHHHHHCCCCCCC
TEDYVHRIGRSGRAGRTGIAINICSIDDRAQLDAINRYLKRTMSVEEIEGMEPKKNTKDM
HHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCE
HVGTAAKRGRGGNRRGGPGAGNRRGGNGGGGYRGKSADNASGEKRGAGAGRPSGKPAGRR
ECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FGGKPTGASAGKPGGQRRSGPARSGEGRPARRSSNG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNLDTLLDNAANEVDGITTTQDLNDKTHPNSEVDTEDKVTFVDLELAPELLEALTSSGY
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCC
KHPTPIQALSIPPALAGRDLLLSAQTGSGKTAAFVLPMLDKIIRDKATNKVVHTVILTPT
CCCCCCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCH
RELANQVSDSVRQYSSKTRNIFSVPLVGGAPYGGQIRALNKGVQVIIATPGRFIDHMNSG
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCEEEEECCCHHHHCCCCC
RIDLSELDILILDEADRMLDMGFAEDIEKVMKAAPKNRQTIMCSATWDGPVGKIAASFTN
CEEHHHCCEEEECCCHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCC
NPERIDIKAETKHIDESVYYADDFNHKNRILDNLLTQKDVNQAIIFAATKRSCETLAKSL
CCCEEEEEEHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
KEQGHKASFLHGDLPQAKRSRIINDVKAGKITILVATDVAARGIDVSGITHVFNYDLPRQ
HHCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECHHHCCCCCCCHHHHHCCCCCCC
TEDYVHRIGRSGRAGRTGIAINICSIDDRAQLDAINRYLKRTMSVEEIEGMEPKKNTKDM
HHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCE
HVGTAAKRGRGGNRRGGPGAGNRRGGNGGGGYRGKSADNASGEKRGAGAGRPSGKPAGRR
ECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FGGKPTGASAGKPGGQRRSGPARSGEGRPARRSSNG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA