| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652880
Identifier: 148652880
GI number: 148652880
Start: 1293782
End: 1295686
Strand: Direct
Name: 148652880
Synonym: PsycPRwf_1073
Alternate gene names: NA
Gene position: 1293782-1295686 (Clockwise)
Preceding gene: 148652878
Following gene: 148652881
Centisome position: 43.43
GC content: 47.45
Gene sequence:
>1905_bases ATGGCCCATCGCAAAGGACAGCCCTTACCTCAACGCTCTTTAAGAGCCGATATGAAAGCGGGTCTGTGCTATAGGTCGTC AAGCACACGGCATGCGACGCTTATTGGCGGCATTTGCTTATCACTTATGGGGTGCCAGTCTACAGCCGCTTTAAGCGCAT CGGCACCGGCGAACTTAATAGACTTCTCAGTCAGCGATCCGGCCCTTACTCAGGCTCAGAGCAAAGCCTTTCAACACACC CTACAGCGCAATCAAGCGGCATATCAACAGCTGTTTGATCAAAGCGCCTTTCCTGATAGCGACACTCAAGCTAAAAATAA GCTTATTAGCGCGTTGCGCCAACATCTGGCTACCGAGCATGTGGCTGTGGCAAAAGCCCGTTATCACCTCACCCCTTTTA TTGCTGAGGGCAGTATTGATGCTGGTGCCGACAGTTTATTTAACACGGTATTAGACATTATTGACTATCAAAACAGTCAC GCTGAAGATGAGGCTTATAGTGAGGAGGAGGTGACTGGTGATGACGTCTATTATGATGAGGAAACAAATGCTTATTATTA TATAGATGACGCAGGCGAAGTGACTGTTATAGAAGAGGCAGCTGCGGCTGTTGCTGCTGCTGACAGTGATGAGGAGGGGT ATGACAGCGATGCGGACGATGGGGCGGCAGATTATGCAGGCCATGAAGAAGGCAGTTTTTTAACCCGTAATAATCCAAAA CGTATGTTGGCCACTTACGAAGAGATGCAGGCGGCTAAGCAAGATAATGCCAAATCAGAAGCAGGCATCGGGGGCATGGG GAGCTTAACGGCTTTGCTGAGCATGAGTAAAAAGACACCTGAGCAGGTCGCCGCTGCTAATGCCTATCAGTACCAATACC TTACTCTCAATAGTGTCAGCCAGTACAAGCCAGCAGAGCGCCGGTATAACAGCGTTTACAGCTATGACTATGCAGCGCCG ACAGTAAGTGGCACCATACAATTGCCCTTTGCGATAGACTTTAATAACAGCCGTGTGTCTGTTGACCCCTCTGCCTTAAT GCCTCTGATGGCACTGATAGATCCTGAAAACACCCCTTTGCCTGATCAAATGATATCGAAGACAGTCGATTTGGGGTTGC CTGCCAGCATCACCTCACAGATTCCGCCTGCAATCATCTATGATGCCAGCATTGCCGCCATGCAAGACAGTATCGCAGAG CTTGACCCTGAGCTGTTTAGCTTAATCGACATCCAAAACGATGACTTTGCCAAGCAGATTGGGGCAGCCCAAGGTATTAA AGTGTATTTTGGCAGTAAGCAAAGTGGTGAGCTTATTGGCAAAATATTTAAACACATCAGTACGGCATTAGAGCGCTATG TGGATGCGCATCCTGAGGCCTACCCTGACAACCATGGCCTAAAAAATGCCATAAAAAAAGTACAGCTTTATAACAAAGGT TATCAAAGTGGGGATATCGGCTCCCTACTGCAACTGATTGAGGCGGTAGTGCCGATCTCTTTTAATCAGGTTAATTATTA TTACCTAGATCAAGCCGGTCACATATTGGGTAAACAGCAGCGTATCAATCTGGGCAGTGACCTTATTGGGATGCAATCGG CAATGCTCAATCAGATACGCTACGACCACAATAGCTTTAGCCAGCATGCTTTAACCCCACTACTTGAGCAGTCCTTTGGT AGCAAGGCACCAAAGTCTATCGATGGCAATGCTTGGTTGCAACAGATCAAGCTAAGCAAACAAAAACAGAGCTTGGCGCA AGCAGCACGAGAAGAGTACTTTTATATCGATGCCACATGTGTCACCCAAGATGAGGGCACTGATGATGACGACTATCATG AAGATGAGACTCATAATGACTGCCACAAGGATAGCTACGATAAGGACAGTTATGGGCCACAATAA
Upstream 100 bases:
>100_bases TTGAGTAAAATTAGCGTACTATCAAGGATATGAAAAGGGTGTCAGATAAATATTTACAAATTTTGGTGTTCAGTATTTTT TAAATAGGAAGTAGGAAGTT
Downstream 100 bases:
>100_bases GCCGTTTTGAGTAAAGGCCTTTAAAGCGCTTTATGCGAACCCTTTACAATCTACCTCAATTATCACCCTTATCAGAACTA GGCTATCAAGGACTTCTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MAHRKGQPLPQRSLRADMKAGLCYRSSSTRHATLIGGICLSLMGCQSTAALSASAPANLIDFSVSDPALTQAQSKAFQHT LQRNQAAYQQLFDQSAFPDSDTQAKNKLISALRQHLATEHVAVAKARYHLTPFIAEGSIDAGADSLFNTVLDIIDYQNSH AEDEAYSEEEVTGDDVYYDEETNAYYYIDDAGEVTVIEEAAAAVAAADSDEEGYDSDADDGAADYAGHEEGSFLTRNNPK RMLATYEEMQAAKQDNAKSEAGIGGMGSLTALLSMSKKTPEQVAAANAYQYQYLTLNSVSQYKPAERRYNSVYSYDYAAP TVSGTIQLPFAIDFNNSRVSVDPSALMPLMALIDPENTPLPDQMISKTVDLGLPASITSQIPPAIIYDASIAAMQDSIAE LDPELFSLIDIQNDDFAKQIGAAQGIKVYFGSKQSGELIGKIFKHISTALERYVDAHPEAYPDNHGLKNAIKKVQLYNKG YQSGDIGSLLQLIEAVVPISFNQVNYYYLDQAGHILGKQQRINLGSDLIGMQSAMLNQIRYDHNSFSQHALTPLLEQSFG SKAPKSIDGNAWLQQIKLSKQKQSLAQAAREEYFYIDATCVTQDEGTDDDDYHEDETHNDCHKDSYDKDSYGPQ
Sequences:
>Translated_634_residues MAHRKGQPLPQRSLRADMKAGLCYRSSSTRHATLIGGICLSLMGCQSTAALSASAPANLIDFSVSDPALTQAQSKAFQHT LQRNQAAYQQLFDQSAFPDSDTQAKNKLISALRQHLATEHVAVAKARYHLTPFIAEGSIDAGADSLFNTVLDIIDYQNSH AEDEAYSEEEVTGDDVYYDEETNAYYYIDDAGEVTVIEEAAAAVAAADSDEEGYDSDADDGAADYAGHEEGSFLTRNNPK RMLATYEEMQAAKQDNAKSEAGIGGMGSLTALLSMSKKTPEQVAAANAYQYQYLTLNSVSQYKPAERRYNSVYSYDYAAP TVSGTIQLPFAIDFNNSRVSVDPSALMPLMALIDPENTPLPDQMISKTVDLGLPASITSQIPPAIIYDASIAAMQDSIAE LDPELFSLIDIQNDDFAKQIGAAQGIKVYFGSKQSGELIGKIFKHISTALERYVDAHPEAYPDNHGLKNAIKKVQLYNKG YQSGDIGSLLQLIEAVVPISFNQVNYYYLDQAGHILGKQQRINLGSDLIGMQSAMLNQIRYDHNSFSQHALTPLLEQSFG SKAPKSIDGNAWLQQIKLSKQKQSLAQAAREEYFYIDATCVTQDEGTDDDDYHEDETHNDCHKDSYDKDSYGPQ >Mature_633_residues AHRKGQPLPQRSLRADMKAGLCYRSSSTRHATLIGGICLSLMGCQSTAALSASAPANLIDFSVSDPALTQAQSKAFQHTL QRNQAAYQQLFDQSAFPDSDTQAKNKLISALRQHLATEHVAVAKARYHLTPFIAEGSIDAGADSLFNTVLDIIDYQNSHA EDEAYSEEEVTGDDVYYDEETNAYYYIDDAGEVTVIEEAAAAVAAADSDEEGYDSDADDGAADYAGHEEGSFLTRNNPKR MLATYEEMQAAKQDNAKSEAGIGGMGSLTALLSMSKKTPEQVAAANAYQYQYLTLNSVSQYKPAERRYNSVYSYDYAAPT VSGTIQLPFAIDFNNSRVSVDPSALMPLMALIDPENTPLPDQMISKTVDLGLPASITSQIPPAIIYDASIAAMQDSIAEL DPELFSLIDIQNDDFAKQIGAAQGIKVYFGSKQSGELIGKIFKHISTALERYVDAHPEAYPDNHGLKNAIKKVQLYNKGY QSGDIGSLLQLIEAVVPISFNQVNYYYLDQAGHILGKQQRINLGSDLIGMQSAMLNQIRYDHNSFSQHALTPLLEQSFGS KAPKSIDGNAWLQQIKLSKQKQSLAQAAREEYFYIDATCVTQDEGTDDDDYHEDETHNDCHKDSYDKDSYGPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69507; Mature: 69376
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRKGQPLPQRSLRADMKAGLCYRSSSTRHATLIGGICLSLMGCQSTAALSASAPANLI CCCCCCCCCCHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCEE DFSVSDPALTQAQSKAFQHTLQRNQAAYQQLFDQSAFPDSDTQAKNKLISALRQHLATEH EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VAVAKARYHLTPFIAEGSIDAGADSLFNTVLDIIDYQNSHAEDEAYSEEEVTGDDVYYDE HHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCEEEEC ETNAYYYIDDAGEVTVIEEAAAAVAAADSDEEGYDSDADDGAADYAGHEEGSFLTRNNPK CCCEEEEECCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCEEECCCCH RMLATYEEMQAAKQDNAKSEAGIGGMGSLTALLSMSKKTPEQVAAANAYQYQYLTLNSVS HHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEECCHH QYKPAERRYNSVYSYDYAAPTVSGTIQLPFAIDFNNSRVSVDPSALMPLMALIDPENTPL HCCCHHHHHHHHHEECCCCCCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHCCCCCCCC PDQMISKTVDLGLPASITSQIPPAIIYDASIAAMQDSIAELDPELFSLIDIQNDDFAKQI CHHHHHHHHCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHH GAAQGIKVYFGSKQSGELIGKIFKHISTALERYVDAHPEAYPDNHGLKNAIKKVQLYNKG CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC YQSGDIGSLLQLIEAVVPISFNQVNYYYLDQAGHILGKQQRINLGSDLIGMQSAMLNQIR CCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCHHCCCCCHHHHHHHHHHHHHH YDHNSFSQHALTPLLEQSFGSKAPKSIDGNAWLQQIKLSKQKQSLAQAAREEYFYIDATC CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE VTQDEGTDDDDYHEDETHNDCHKDSYDKDSYGPQ EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AHRKGQPLPQRSLRADMKAGLCYRSSSTRHATLIGGICLSLMGCQSTAALSASAPANLI CCCCCCCCCHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCEE DFSVSDPALTQAQSKAFQHTLQRNQAAYQQLFDQSAFPDSDTQAKNKLISALRQHLATEH EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VAVAKARYHLTPFIAEGSIDAGADSLFNTVLDIIDYQNSHAEDEAYSEEEVTGDDVYYDE HHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCEEEEC ETNAYYYIDDAGEVTVIEEAAAAVAAADSDEEGYDSDADDGAADYAGHEEGSFLTRNNPK CCCEEEEECCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCEEECCCCH RMLATYEEMQAAKQDNAKSEAGIGGMGSLTALLSMSKKTPEQVAAANAYQYQYLTLNSVS HHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEECCHH QYKPAERRYNSVYSYDYAAPTVSGTIQLPFAIDFNNSRVSVDPSALMPLMALIDPENTPL HCCCHHHHHHHHHEECCCCCCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHCCCCCCCC PDQMISKTVDLGLPASITSQIPPAIIYDASIAAMQDSIAELDPELFSLIDIQNDDFAKQI CHHHHHHHHCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHH GAAQGIKVYFGSKQSGELIGKIFKHISTALERYVDAHPEAYPDNHGLKNAIKKVQLYNKG CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC YQSGDIGSLLQLIEAVVPISFNQVNYYYLDQAGHILGKQQRINLGSDLIGMQSAMLNQIR CCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCHHCCCCCHHHHHHHHHHHHHH YDHNSFSQHALTPLLEQSFGSKAPKSIDGNAWLQQIKLSKQKQSLAQAAREEYFYIDATC CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE VTQDEGTDDDDYHEDETHNDCHKDSYDKDSYGPQ EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA