| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652821
Identifier: 148652821
GI number: 148652821
Start: 1207141
End: 1207971
Strand: Direct
Name: 148652821
Synonym: PsycPRwf_1014
Alternate gene names: NA
Gene position: 1207141-1207971 (Clockwise)
Preceding gene: 148652819
Following gene: 148652822
Centisome position: 40.52
GC content: 45.97
Gene sequence:
>831_bases ATGAAAAAACTCTCCTCAAATACGCTAAATCATCTACGCGATCGCATTCATATTATCATTGAAGGCACAGATACGCCTTT AGGTAAGCTGTTTGATATCGTATTATTGATAGCCATTGCCGCTAGTGTGGCCGTGGTGATGTTAGACAGTGTGCTGTATT TGCGCCTGCAATTTGGTACAGTATTCTTTTATGCAGAATGGTTTTTTACCATTTTATTCACCATAGAATATTTGCTGCGC CTGTTTTCGGCACCCAACCGGGTACGCTATGTATTTAGCTTCTTTGGGGTGGTGGACTTATTGTCTGTATTGCCCAGTTA TTTAAGCTTAATATTTGGTGGTGTTCAGTACTTAATTGTGGTGCGCATCCTACGTATTCTACGTGTGTTCCGAGTGTTAA AGCTCAAATCTTATATGCAGCAAGCGGGGTTTTTGGCCGCAGCCCTACGCACCAGTCAACAAAAAATCACCGTGTTCTTC TTGTCCTTGGTGCTGTTGGTTATGATTTTCGGCTCGGTCATCTATGTGGTCGAGGGGCCAGAAAATGGCTTTACCAGTAT TCCGGTATCTATCTACTGGGCGACGGTAACTTTGACCACGGTGGGCTATGGCGATATGTCACCTAAGACCCCTTTAGGTC AGTTTATTGCAACCATGGTGATGATGACCGGTTACTCCATTATTGCGGTGCCGACCGGTATCTTTACCTCTGAGCTTGCT AAGAGCATGCGCCCGCAGCTACATCCAGTCACTTGCCCTAACTGTGGTAAGTTTGGTCACGCCGCCGGTGCTCAGTTTTG TGACCGCTGTGGTCATGACCTGCACATCTAG
Upstream 100 bases:
>100_bases ATAAAAAAGGATGTGCTAAAAACAAAGTTTGTCTAATAGGTAACATTGCCGATGTAATAACGTATAATGGGCCACTCTTA TAGATCAGTTACCCGTATTT
Downstream 100 bases:
>100_bases TTTTGCCTTATAAGTGCCGATTTTATCTATAATATAGCGGCACTTTGCTCATGTTACAGACGCATTAAGTTATAAATTTT TACGACCTAATGCCTGACCT
Product: Ion transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKKLSSNTLNHLRDRIHIIIEGTDTPLGKLFDIVLLIAIAASVAVVMLDSVLYLRLQFGTVFFYAEWFFTILFTIEYLLR LFSAPNRVRYVFSFFGVVDLLSVLPSYLSLIFGGVQYLIVVRILRILRVFRVLKLKSYMQQAGFLAAALRTSQQKITVFF LSLVLLVMIFGSVIYVVEGPENGFTSIPVSIYWATVTLTTVGYGDMSPKTPLGQFIATMVMMTGYSIIAVPTGIFTSELA KSMRPQLHPVTCPNCGKFGHAAGAQFCDRCGHDLHI
Sequences:
>Translated_276_residues MKKLSSNTLNHLRDRIHIIIEGTDTPLGKLFDIVLLIAIAASVAVVMLDSVLYLRLQFGTVFFYAEWFFTILFTIEYLLR LFSAPNRVRYVFSFFGVVDLLSVLPSYLSLIFGGVQYLIVVRILRILRVFRVLKLKSYMQQAGFLAAALRTSQQKITVFF LSLVLLVMIFGSVIYVVEGPENGFTSIPVSIYWATVTLTTVGYGDMSPKTPLGQFIATMVMMTGYSIIAVPTGIFTSELA KSMRPQLHPVTCPNCGKFGHAAGAQFCDRCGHDLHI >Mature_276_residues MKKLSSNTLNHLRDRIHIIIEGTDTPLGKLFDIVLLIAIAASVAVVMLDSVLYLRLQFGTVFFYAEWFFTILFTIEYLLR LFSAPNRVRYVFSFFGVVDLLSVLPSYLSLIFGGVQYLIVVRILRILRVFRVLKLKSYMQQAGFLAAALRTSQQKITVFF LSLVLLVMIFGSVIYVVEGPENGFTSIPVSIYWATVTLTTVGYGDMSPKTPLGQFIATMVMMTGYSIIAVPTGIFTSELA KSMRPQLHPVTCPNCGKFGHAAGAQFCDRCGHDLHI
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cyclic nucleotide-binding domain [H]
Homologues:
Organism=Homo sapiens, GI27436974, Length=236, Percent_Identity=32.6271186440678, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI4826784, Length=184, Percent_Identity=34.7826086956522, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI20070166, Length=169, Percent_Identity=39.0532544378698, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI27436986, Length=188, Percent_Identity=31.9148936170213, Blast_Score=118, Evalue=6e-27, Organism=Homo sapiens, GI27436984, Length=188, Percent_Identity=31.9148936170213, Blast_Score=118, Evalue=6e-27, Organism=Homo sapiens, GI9789987, Length=188, Percent_Identity=31.9148936170213, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI27436981, Length=188, Percent_Identity=32.4468085106383, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI88758565, Length=191, Percent_Identity=31.413612565445, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI25952108, Length=261, Percent_Identity=29.8850574712644, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI4504817, Length=253, Percent_Identity=27.6679841897233, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI13492973, Length=277, Percent_Identity=28.158844765343, Blast_Score=104, Evalue=8e-23, Organism=Homo sapiens, GI45383011, Length=279, Percent_Identity=26.1648745519713, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI25952092, Length=197, Percent_Identity=30.4568527918782, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI119395748, Length=226, Percent_Identity=28.7610619469027, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI4826782, Length=194, Percent_Identity=29.8969072164948, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI5031819, Length=192, Percent_Identity=33.3333333333333, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI27436988, Length=184, Percent_Identity=33.695652173913, Blast_Score=101, Evalue=9e-22, Organism=Homo sapiens, GI25952087, Length=194, Percent_Identity=29.3814432989691, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI27436996, Length=251, Percent_Identity=27.8884462151394, Blast_Score=98, Evalue=9e-21, Organism=Homo sapiens, GI4504821, Length=224, Percent_Identity=28.125, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI24497458, Length=198, Percent_Identity=28.7878787878788, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI19424136, Length=185, Percent_Identity=34.5945945945946, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI21217561, Length=198, Percent_Identity=28.7878787878788, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI21217563, Length=198, Percent_Identity=28.7878787878788, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI163792201, Length=200, Percent_Identity=30, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI4826786, Length=200, Percent_Identity=30, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI24497460, Length=209, Percent_Identity=28.2296650717703, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI88758576, Length=188, Percent_Identity=29.7872340425532, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI24497462, Length=188, Percent_Identity=29.7872340425532, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI7657289, Length=248, Percent_Identity=28.2258064516129, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI26638655, Length=197, Percent_Identity=30.4568527918782, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI27436993, Length=173, Percent_Identity=27.1676300578035, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI26638653, Length=197, Percent_Identity=30.4568527918782, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI19071574, Length=173, Percent_Identity=27.1676300578035, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI26051262, Length=190, Percent_Identity=25.7894736842105, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI26051260, Length=190, Percent_Identity=25.7894736842105, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI26051266, Length=190, Percent_Identity=25.7894736842105, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI26051264, Length=190, Percent_Identity=25.7894736842105, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI6912444, Length=230, Percent_Identity=28.695652173913, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI236462242, Length=197, Percent_Identity=28.9340101522843, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI28373065, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI236461719, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI236462079, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI236461942, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI26051268, Length=190, Percent_Identity=25.2631578947368, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI32479525, Length=209, Percent_Identity=30.1435406698565, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI32479527, Length=209, Percent_Identity=30.1435406698565, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71989381, Length=210, Percent_Identity=35.2380952380952, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71989376, Length=210, Percent_Identity=35.2380952380952, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71989369, Length=210, Percent_Identity=35.2380952380952, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI71989361, Length=210, Percent_Identity=35.2380952380952, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17544122, Length=189, Percent_Identity=34.9206349206349, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71994134, Length=188, Percent_Identity=31.9148936170213, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25148255, Length=234, Percent_Identity=28.6324786324786, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71994313, Length=198, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI193206869, Length=197, Percent_Identity=30.4568527918782, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17569273, Length=187, Percent_Identity=31.5508021390374, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI72000220, Length=187, Percent_Identity=34.2245989304813, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71994320, Length=174, Percent_Identity=34.4827586206897, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI32564076, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI32564088, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI32564084, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71986008, Length=194, Percent_Identity=35.0515463917526, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI32564082, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI32564090, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI32564086, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71986003, Length=194, Percent_Identity=35.0515463917526, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71986011, Length=194, Percent_Identity=35.0515463917526, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI32564080, Length=188, Percent_Identity=30.3191489361702, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71986574, Length=186, Percent_Identity=27.4193548387097, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI25147238, Length=254, Percent_Identity=25.5905511811024, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI25147242, Length=246, Percent_Identity=25.609756097561, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71985535, Length=187, Percent_Identity=28.8770053475936, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115532628, Length=193, Percent_Identity=31.6062176165803, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71998749, Length=193, Percent_Identity=31.6062176165803, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI32564074, Length=181, Percent_Identity=33.1491712707182, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI32564070, Length=204, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI32564068, Length=181, Percent_Identity=33.1491712707182, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI32564072, Length=204, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193207406, Length=196, Percent_Identity=27.5510204081633, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32564066, Length=190, Percent_Identity=27.8947368421053, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI17737641, Length=188, Percent_Identity=32.9787234042553, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI161084970, Length=188, Percent_Identity=32.9787234042553, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI116007764, Length=189, Percent_Identity=34.3915343915344, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI24656294, Length=189, Percent_Identity=34.3915343915344, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI24656289, Length=189, Percent_Identity=34.3915343915344, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI281365536, Length=189, Percent_Identity=34.3915343915344, Blast_Score=110, Evalue=8e-25, Organism=Drosophila melanogaster, GI17136468, Length=236, Percent_Identity=30.5084745762712, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI221330674, Length=236, Percent_Identity=30.5084745762712, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI28574020, Length=236, Percent_Identity=30.5084745762712, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24642916, Length=228, Percent_Identity=27.6315789473684, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24642914, Length=228, Percent_Identity=27.6315789473684, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24642910, Length=201, Percent_Identity=28.8557213930348, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI45555859, Length=201, Percent_Identity=28.8557213930348, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI45549143, Length=201, Percent_Identity=28.8557213930348, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI161076829, Length=188, Percent_Identity=31.3829787234043, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI221330117, Length=201, Percent_Identity=30.8457711442786, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI281363095, Length=201, Percent_Identity=30.8457711442786, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI221330119, Length=201, Percent_Identity=30.8457711442786, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI281363097, Length=201, Percent_Identity=30.8457711442786, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR018488 - InterPro: IPR000595 - InterPro: IPR005821 - InterPro: IPR003091 - InterPro: IPR014710 [H]
Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]
EC number: NA
Molecular weight: Translated: 30831; Mature: 30831
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSSNTLNHLRDRIHIIIEGTDTPLGKLFDIVLLIAIAASVAVVMLDSVLYLRLQFGT CCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFFYAEWFFTILFTIEYLLRLFSAPNRVRYVFSFFGVVDLLSVLPSYLSLIFGGVQYLIV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRILRILRVFRVLKLKSYMQQAGFLAAALRTSQQKITVFFLSLVLLVMIFGSVIYVVEGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECC ENGFTSIPVSIYWATVTLTTVGYGDMSPKTPLGQFIATMVMMTGYSIIAVPTGIFTSELA CCCCCCCCCEEEEEEHEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHEEECCHHHHHHHH KSMRPQLHPVTCPNCGKFGHAAGAQFCDRCGHDLHI HHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKLSSNTLNHLRDRIHIIIEGTDTPLGKLFDIVLLIAIAASVAVVMLDSVLYLRLQFGT CCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFFYAEWFFTILFTIEYLLRLFSAPNRVRYVFSFFGVVDLLSVLPSYLSLIFGGVQYLIV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRILRILRVFRVLKLKSYMQQAGFLAAALRTSQQKITVFFLSLVLLVMIFGSVIYVVEGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECC ENGFTSIPVSIYWATVTLTTVGYGDMSPKTPLGQFIATMVMMTGYSIIAVPTGIFTSELA CCCCCCCCCEEEEEEHEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHEEECCHHHHHHHH KSMRPQLHPVTCPNCGKFGHAAGAQFCDRCGHDLHI HHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1522059 [H]