| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is lip [H]
Identifier: 148652775
GI number: 148652775
Start: 1154933
End: 1156027
Strand: Direct
Name: lip [H]
Synonym: PsycPRwf_0968
Alternate gene names: 148652775
Gene position: 1154933-1156027 (Clockwise)
Preceding gene: 148652774
Following gene: 148652776
Centisome position: 38.77
GC content: 47.58
Gene sequence:
>1095_bases ATGAGTGTATTAACCCAAGTTAATAAAAGCACGACAGCTCAATCTAAAAAATACGCAGTGGCTGCCGCTATGCTACTGGC AATGAGCCTTTTAGGGCTGGCTAACCGCGCTGCTGCGGCTGAGTATTACAACTGCTCTAATCCCACGGGCTGTCAGCTGA TAAAGAGTATTGAGCCAGAGGACAACCTGACCGCCACACAGTATCCTGTGGTATTGGCACATGGCTTGGGCGGTTTTAAT AGCTTATTTGGTATCATTAATTACTTCAATGGCATTCCCGAGGCATTAATAGCAGGCGGTAGCGAGGTGTATGTCACCAA GACCTCGGCCATTCACGATGCTGAGTTTCGGGGTGAACAATTGCTACAGCAAGTACAAACCATCACCGCTGTCACCGGCA AACAAAAAGTGAATCTAGTGGGGCACAGCCTAGGCGGCATAGACATTCGCTATGTGGCTGCAGTAGCGCCAGAGTCTGTG GCTTCAGTGACTGCAGTCGCCAGCCCTGAACAGGGCTCAAAAATGGCCGATTGGCTATTAAATCTGGTGACCAACAGCAG TGCCAAAAGCGGCTACGCGCCAGGTGAATACAATCTGCGGAGTCGGGCTTTAATTAACTTTCACAATGCTTTGGGACGCT TTTTAGATTACGGTTCAGGTATCAATCGCAAACAACTACAGCAGCAAGACGGGGTGCGTGCGGTTACCGGTTTGACCACA GACTATATGGCACACTACTATAATCGAAAATATCCTGCGGCCATGCCAAGTGAATATTGTGGTCAGCCGCCGGATAATTT TGTGGTTAATGATATTCCCTATTATTCCTTCTCAGGGGTGGGCACCATCACCAATGGTCTAGATCCGAGTGATTATCTGC TGTCGCTTACCGCATTGAGCTTTGGTAAAGATGATGCCAATGACGGGCTGGTATCGGCCTGCTCTAGCCGGATAGGCTAT GTGATTCGAGATGATTATAAAATGAACCATTTAGACTCAGTGAATCAGATGTTTGGTCTGGTGGCTTGGGGTGAAGTAGA TCCGATTTCGGTATATCGCGCCCAAATCAATCGATTAAAAAATAATGGCTTATAA
Upstream 100 bases:
>100_bases GACCTACCCCATGGCGCATCAGGTCTGCTTACCACAGCTTCAAGCCATTGGTCAGTGGCTAAACAACGTACTGTAACCCC AGCCAATACAGGGATGTTTG
Downstream 100 bases:
>100_bases AAATCAAACTGCTCCCGCTGTGTCTACCAGGTGCGACCCAATAAGTGGTAAAACCAAGCTATGAAAAATAAATCATGGAT TAAAACGGCGCTTATTGTGC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSVLTQVNKSTTAQSKKYAVAAAMLLAMSLLGLANRAAAAEYYNCSNPTGCQLIKSIEPEDNLTATQYPVVLAHGLGGFN SLFGIINYFNGIPEALIAGGSEVYVTKTSAIHDAEFRGEQLLQQVQTITAVTGKQKVNLVGHSLGGIDIRYVAAVAPESV ASVTAVASPEQGSKMADWLLNLVTNSSAKSGYAPGEYNLRSRALINFHNALGRFLDYGSGINRKQLQQQDGVRAVTGLTT DYMAHYYNRKYPAAMPSEYCGQPPDNFVVNDIPYYSFSGVGTITNGLDPSDYLLSLTALSFGKDDANDGLVSACSSRIGY VIRDDYKMNHLDSVNQMFGLVAWGEVDPISVYRAQINRLKNNGL
Sequences:
>Translated_364_residues MSVLTQVNKSTTAQSKKYAVAAAMLLAMSLLGLANRAAAAEYYNCSNPTGCQLIKSIEPEDNLTATQYPVVLAHGLGGFN SLFGIINYFNGIPEALIAGGSEVYVTKTSAIHDAEFRGEQLLQQVQTITAVTGKQKVNLVGHSLGGIDIRYVAAVAPESV ASVTAVASPEQGSKMADWLLNLVTNSSAKSGYAPGEYNLRSRALINFHNALGRFLDYGSGINRKQLQQQDGVRAVTGLTT DYMAHYYNRKYPAAMPSEYCGQPPDNFVVNDIPYYSFSGVGTITNGLDPSDYLLSLTALSFGKDDANDGLVSACSSRIGY VIRDDYKMNHLDSVNQMFGLVAWGEVDPISVYRAQINRLKNNGL >Mature_363_residues SVLTQVNKSTTAQSKKYAVAAAMLLAMSLLGLANRAAAAEYYNCSNPTGCQLIKSIEPEDNLTATQYPVVLAHGLGGFNS LFGIINYFNGIPEALIAGGSEVYVTKTSAIHDAEFRGEQLLQQVQTITAVTGKQKVNLVGHSLGGIDIRYVAAVAPESVA SVTAVASPEQGSKMADWLLNLVTNSSAKSGYAPGEYNLRSRALINFHNALGRFLDYGSGINRKQLQQQDGVRAVTGLTTD YMAHYYNRKYPAAMPSEYCGQPPDNFVVNDIPYYSFSGVGTITNGLDPSDYLLSLTALSFGKDDANDGLVSACSSRIGYV IRDDYKMNHLDSVNQMFGLVAWGEVDPISVYRAQINRLKNNGL
Specific function: Catalyzes the hydrolysis of triglycerides. Catalyzes the synthesis of macrocyclic lactones in anhydrous organic solvents [H]
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cell surface. Secreted, extracellular space. Note=During early stationary growth phase about 10% of the enzyme molecules remain cell-bound while about 90% are released into the growth medium [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Pseudomonas lipase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 39244; Mature: 39112
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLTQVNKSTTAQSKKYAVAAAMLLAMSLLGLANRAAAAEYYNCSNPTGCQLIKSIEPE CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC DNLTATQYPVVLAHGLGGFNSLFGIINYFNGIPEALIAGGSEVYVTKTSAIHDAEFRGEQ CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCHHHHHHH LLQQVQTITAVTGKQKVNLVGHSLGGIDIRYVAAVAPESVASVTAVASPEQGSKMADWLL HHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEHHCCHHHHHHHEECCCCCCHHHHHHHH NLVTNSSAKSGYAPGEYNLRSRALINFHNALGRFLDYGSGINRKQLQQQDGVRAVTGLTT HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEHHHHHH DYMAHYYNRKYPAAMPSEYCGQPPDNFVVNDIPYYSFSGVGTITNGLDPSDYLLSLTALS HHHHHHHCCCCCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FGKDDANDGLVSACSSRIGYVIRDDYKMNHLDSVNQMFGLVAWGEVDPISVYRAQINRLK CCCCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH NNGL CCCC >Mature Secondary Structure SVLTQVNKSTTAQSKKYAVAAAMLLAMSLLGLANRAAAAEYYNCSNPTGCQLIKSIEPE CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC DNLTATQYPVVLAHGLGGFNSLFGIINYFNGIPEALIAGGSEVYVTKTSAIHDAEFRGEQ CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCCHHHHHHH LLQQVQTITAVTGKQKVNLVGHSLGGIDIRYVAAVAPESVASVTAVASPEQGSKMADWLL HHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEHHCCHHHHHHHEECCCCCCHHHHHHHH NLVTNSSAKSGYAPGEYNLRSRALINFHNALGRFLDYGSGINRKQLQQQDGVRAVTGLTT HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEHHHHHH DYMAHYYNRKYPAAMPSEYCGQPPDNFVVNDIPYYSFSGVGTITNGLDPSDYLLSLTALS HHHHHHHCCCCCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FGKDDANDGLVSACSSRIGYVIRDDYKMNHLDSVNQMFGLVAWGEVDPISVYRAQINRLK CCCCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH NNGL CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1512563; 1632642; 1576157; 10984043; 1748875; 11133953 [H]