Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

Click here to switch to the map view.

The map label for this gene is 148652742

Identifier: 148652742

GI number: 148652742

Start: 1117647

End: 1118198

Strand: Direct

Name: 148652742

Synonym: PsycPRwf_0935

Alternate gene names: NA

Gene position: 1117647-1118198 (Clockwise)

Preceding gene: 148652741

Following gene: 148652743

Centisome position: 37.52

GC content: 50.0

Gene sequence:

>552_bases
ATGGGGTTTTTAGACATTGTTATTGCCATTATGGTGCTGGCAGGGTTGTGGCGAGGCTTTAGCGCAGGTTTTATTCGTAG
CGCCATCTCGCTGGTAGGCTGGTTTATCGCCCTATTAGCTGCAACGCGCTTGGCCGATGACGTGGCGCCTTATTTGGCCA
ATGTTGTCAGCTCCCCCGTATTACAGATGGGCGCAGGCTTTTTGGCCGTGGTACTTATCGTAATGCTGGTGATTCAGATA
CTCACCATGCTGGTGTCTGGTATTGTCAAAAGCCTAAAGCTTGGTTTTATTGACCAGCTGGCCGGCGGGGTACTGGGTGC
TTTTAAAAACCTACTTGTGGTGCTGGTGATGCTTAGTGTATCAGCGCCGGTACTGGTCAATACGGCCATGTGGCAGTCTT
CTGTGCTTGCGCCAGAGCTACTGCCTTATGCCCCTTTTGCCAAAGAATTTGCTACCAAAGTGTTGGGTGAGGCATGGCAA
CAAATTGATGTGCCTGACTCGAAAAGCAATGATCCCTCTGCTGTTGATTCAAACTCAATGGAGCAGCAGTAA

Upstream 100 bases:

>100_bases
GGTGCAGCAGTGTGTCGAAGCCATTACCAGTCATCGTGATGCCATGATGCTTTAGTAAGCCACCAATTGATAAAACAACT
AAAGTAGGCGTGGAGAGAGT

Downstream 100 bases:

>100_bases
GCGGGTTGATAACCAAAAGCTGAGTGTTTTCAGCGATGAAGTGTAGTTTAGCCACCACTAAATGAATCTTTTAACCAGTA
AAGACTATTTTAAAAGGATA

Product: colicin V production protein

Products: NA

Alternate protein names: CvpA Protein

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MGFLDIVIAIMVLAGLWRGFSAGFIRSAISLVGWFIALLAATRLADDVAPYLANVVSSPVLQMGAGFLAVVLIVMLVIQI
LTMLVSGIVKSLKLGFIDQLAGGVLGAFKNLLVVLVMLSVSAPVLVNTAMWQSSVLAPELLPYAPFAKEFATKVLGEAWQ
QIDVPDSKSNDPSAVDSNSMEQQ

Sequences:

>Translated_183_residues
MGFLDIVIAIMVLAGLWRGFSAGFIRSAISLVGWFIALLAATRLADDVAPYLANVVSSPVLQMGAGFLAVVLIVMLVIQI
LTMLVSGIVKSLKLGFIDQLAGGVLGAFKNLLVVLVMLSVSAPVLVNTAMWQSSVLAPELLPYAPFAKEFATKVLGEAWQ
QIDVPDSKSNDPSAVDSNSMEQQ
>Mature_182_residues
GFLDIVIAIMVLAGLWRGFSAGFIRSAISLVGWFIALLAATRLADDVAPYLANVVSSPVLQMGAGFLAVVLIVMLVIQIL
TMLVSGIVKSLKLGFIDQLAGGVLGAFKNLLVVLVMLSVSAPVLVNTAMWQSSVLAPELLPYAPFAKEFATKVLGEAWQQ
IDVPDSKSNDPSAVDSNSMEQQ

Specific function: Unknown

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19406; Mature: 19275

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLDIVIAIMVLAGLWRGFSAGFIRSAISLVGWFIALLAATRLADDVAPYLANVVSSPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQMGAGFLAVVLIVMLVIQILTMLVSGIVKSLKLGFIDQLAGGVLGAFKNLLVVLVMLSV
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAPVLVNTAMWQSSVLAPELLPYAPFAKEFATKVLGEAWQQIDVPDSKSNDPSAVDSNSM
CCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
EQQ
CCC
>Mature Secondary Structure 
GFLDIVIAIMVLAGLWRGFSAGFIRSAISLVGWFIALLAATRLADDVAPYLANVVSSPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQMGAGFLAVVLIVMLVIQILTMLVSGIVKSLKLGFIDQLAGGVLGAFKNLLVVLVMLSV
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAPVLVNTAMWQSSVLAPELLPYAPFAKEFATKVLGEAWQQIDVPDSKSNDPSAVDSNSM
CCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
EQQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA