Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148652740

Identifier: 148652740

GI number: 148652740

Start: 1115791

End: 1116327

Strand: Direct

Name: 148652740

Synonym: PsycPRwf_0933

Alternate gene names: NA

Gene position: 1115791-1116327 (Clockwise)

Preceding gene: 148652739

Following gene: 148652741

Centisome position: 37.46

GC content: 43.58

Gene sequence:

>537_bases
ATGGACCCGAAGCATTCTGATAATAATAGTGGCAAACCCACATTAGATAAGCCAAATCTTGATAGGCCAGTCTTTGACTC
AACTACTGAGTTTGGGCATTCAAACTTGGTGCGTCAACCCATAGGTGCGCCTGATATATTAAGCCATGAGCAGCAAGAGT
CTTTGATTCGTTATAACCACATCACCTACTTATTATATGCGCTTAGCTTTTTTACAGCGGGCTTGATGTGGATAGTGCCT
ATTGTTATGAATTATGCCCGCCGCCAGCAGGCTGACGGAACTTGGCTTGCCACACATTTTGATTGGCAAATTAAGACCTT
TTGGTACAGTATTATCTTAGGCATCCTAGGCATTATCATAGGTGTGATTGGCTTAGGCGGATTGGGGATAGGTGTGTTTG
CCGATAGCTCAAATGTGGCCTTAGGCTCAACTGCTCTTACTGTGGTCGGCGGCATTATATTTTTGTTTTCAATCATTTGG
CACATCTACCGTATTGTCAAAGGCTGGATAGCCTTAAGTGATAAGCGGCCTATTTAG

Upstream 100 bases:

>100_bases
GCCATGAGATAGGGCGTTATGTGCCTAAGCAGTATTAGCAGCTTTATGGCTTAGCTGATTTTTTGCTGGCTGAAAAAACA
ACTTTAAAAAGGGGGCAATA

Downstream 100 bases:

>100_bases
TAAGTGGTCATAATAAACGTGCCAAATCTCACAGTGACATCAATCACTTAGCTGTATTTTAGCGGTTATTTTAGTGGTTA
TTTTAGTTGTGACTAATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MDPKHSDNNSGKPTLDKPNLDRPVFDSTTEFGHSNLVRQPIGAPDILSHEQQESLIRYNHITYLLYALSFFTAGLMWIVP
IVMNYARRQQADGTWLATHFDWQIKTFWYSIILGILGIIIGVIGLGGLGIGVFADSSNVALGSTALTVVGGIIFLFSIIW
HIYRIVKGWIALSDKRPI

Sequences:

>Translated_178_residues
MDPKHSDNNSGKPTLDKPNLDRPVFDSTTEFGHSNLVRQPIGAPDILSHEQQESLIRYNHITYLLYALSFFTAGLMWIVP
IVMNYARRQQADGTWLATHFDWQIKTFWYSIILGILGIIIGVIGLGGLGIGVFADSSNVALGSTALTVVGGIIFLFSIIW
HIYRIVKGWIALSDKRPI
>Mature_178_residues
MDPKHSDNNSGKPTLDKPNLDRPVFDSTTEFGHSNLVRQPIGAPDILSHEQQESLIRYNHITYLLYALSFFTAGLMWIVP
IVMNYARRQQADGTWLATHFDWQIKTFWYSIILGILGIIIGVIGLGGLGIGVFADSSNVALGSTALTVVGGIIFLFSIIW
HIYRIVKGWIALSDKRPI

Specific function: Unknown

COG id: COG3671

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19855; Mature: 19855

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPKHSDNNSGKPTLDKPNLDRPVFDSTTEFGHSNLVRQPIGAPDILSHEQQESLIRYNH
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHH
ITYLLYALSFFTAGLMWIVPIVMNYARRQQADGTWLATHFDWQIKTFWYSIILGILGIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
GVIGLGGLGIGVFADSSNVALGSTALTVVGGIIFLFSIIWHIYRIVKGWIALSDKRPI
HHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDPKHSDNNSGKPTLDKPNLDRPVFDSTTEFGHSNLVRQPIGAPDILSHEQQESLIRYNH
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHH
ITYLLYALSFFTAGLMWIVPIVMNYARRQQADGTWLATHFDWQIKTFWYSIILGILGIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
GVIGLGGLGIGVFADSSNVALGSTALTVVGGIIFLFSIIWHIYRIVKGWIALSDKRPI
HHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA