| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is acnB [H]
Identifier: 148652708
GI number: 148652708
Start: 1070212
End: 1072815
Strand: Direct
Name: acnB [H]
Synonym: PsycPRwf_0901
Alternate gene names: 148652708
Gene position: 1070212-1072815 (Clockwise)
Preceding gene: 148652701
Following gene: 148652709
Centisome position: 35.93
GC content: 47.39
Gene sequence:
>2604_bases GTGTTAGACGCCTATCGTAAACATGTCGAAGAACGTGCCCAACTTGGTACAGTACCCCTACCACTATCTGAGCATCAGAC TGCCGATTTAGTTGAGCTATTAAAAAACCCACCAGCCGGTGAAGAAGAGTTTTTGATGGACCTTTTGGTTAACCGTGTAC CTGCCGGTGTTGACCAAGCAGCTTATGTAAAAGCGGCCTTTTTAGCAGCGATCGTAAAAGGCGAAGCAACCTCACCATTA ATCACTAAGCAAAAAGCAGTAGATATCCTAGGCACTATGCAAGGCGGTTATAACGTATTGCCTTTAGTTGAAGCGCTAGA TGATGCTGAAGTGGCTGAGAACGCAGCAGAAGCTCTAAAGAAAACCCTATTGGTATTCGATGCTTTCAATGATGTGACCG AAAAAGCAGAAGCGGGTAACGCTAAAGCCAAAGAAGTGGTTCAGTCATGGGCTGACGCTGAATGGTTCTTAAACCGTCCT GAAGTACCACAAAAATCGACTTATACGGCGTTCAAAGTAACGGGCGAAACTAACACAGATGATTTGTCTCCAGCACAGGA TGCGTGGAGCCGTCCGGATATTCCACTTCACTCATTGGCTATGCACAAAAACTCTCGTGACGGCATCACTGCTGATGAAG AGGGCGTACGTGGTCCAATGAAGCAGATTGAAGCGCTAAAAGAAAAAGGCTTCCCTCTAGCGTATGTGGGTGACGTTGTG GGTACCGGTTCTAGCCGTAAATCTGCTACCAACTCAGTACTTTGGTTAATGGGCGATGATATTCCTAACGTGCCAAACAA ACGTGCTGGCGGTCTGGTATTGGGCGGCAAAATTGCGCCTATCTTCTATAACACGATGGAAGACTCAGGTGCACTACCGA TTGAAAATGTAGCTGTTGATAACATCAATATGGGCGATGTATTTGATGTTTATCCTTATGAGGGTAAAATCACTAAGCAT GACTCAGATGAAGTATTATCAACCTTCAAACTAAACTCAAATACCTTACTAGATGAAGTTCGTGCCGGTGGTCGTATTCC ATTAATCGTGGGCCGCGCCTTAACCAACCGCGCTCGTGAATACATGGGTCTTGAGCATTCAGACGTATTTGCAAAACCTG AGCAGCCTGCGTCATCTGATAAAGGCTTTACTTTAGCTCAGAAGATGGTTGGTAAAGCATGTGGTATGGAAGGTGTACGT CCAGGTATGTACTGTGAGCCTAAGATGACTACGGTTGGTTCGCAAGATACCACTGGTCCTATGACTCGTGATGAGTTAAA AGACTTAGCTTGCTTAGGTTTCCAAGCAGATCTAGTGATGCAGTCTTTCTGTCACACAGCCGCTTATCCTAAGCCAGTTG ACGTTGAAACTCAGCACACACTACCAGATTTCATCATGAACCGCGGCGGTGTCAGCTTACGTCCAGGTGACGGTATCATC CACTCATGGCTAAACCGTATGCTTCTTCCAGATACTGTTGGTACCGGTGGTGACTCGCATACTCGTTTCCCAATGGGTAT CTCATTCCCAGCAGGTTCTGGCTTGGTAGCTTTCGCAGCAGCGACGGGTGTTATGCCACTAGATATGCCTGAGTCTGTTC GTGTTCGCTTCGTTGGTGAGCGTCAGCCTGGCATCACCCTACGTGACCTAGTACACGCGATCCCATTACAAGCGATCAAA GAAGGTTATTTAACCGTTGATAAGAAAGGCAAAATCAACGAGTTTAACGGCCGTATCTTAGAGATTGAAGGTCTAGAAGA CTTAACGGTAGAGCAAGCGTTCGAACTATCAGACGCCTCAGCTGAGCGTAGTGCAGCGGGTTGTACCATCACTTTATCTG AAGAGTCAGTTACTGAGTACCTAAACTCAAACATCACGCTTCTTAAGTGGATGATTGCTGAAGGCTACGGCGATGCTCGT ACGCTAAGCCGTCGTATCGAAGCGATGCAAGAGTGGTTGAAGAACCCAAGCTTGATGCGTGCTGACGCTGATGCTGAATA CGCCATCGATATGACCATCGATATGAGCCAAATCAAAGAGCCTGTACTGTGCTGCCCGAACGATCCAGATGATGCCAAGA CTTTATCTGACGTCGCTGGCGACAAGATTGATGAAGTATTCATCGGTTCTTGTATGACCAACATCGGTCACTTCCGTGCC GCAGGTAAACTGCTACAAGAAGTACCAGCAGGTAGCCTGAAAACTCGTCTATGGATTGCACCACCCACTAAGATGGATGC ACGCCAGCTAATGGAAGAGGGCTACTACAATACTTACGCACAAGCCGGCGCACGTACTGAGATGCCAGGTTGTTCGCTAT GTATGGGTAACCAAGCACGTATTGCACCAAACTCTACAGCGGTATCTACCTCTACCCGTAACTTCCCGAACCGTTTGGGC CAAGGCGCTAACGTATACCTAGCTTCAGCTGAGCTTGCGGCAGTTGCTGCGGTACTTGGTAAGCTGCCAACGAACGAAGA GTATCAGCAGTACGCTGGCATGCTAAACAGCATGGGCGGTGAAGTATATCGTTACATGAACTTCGATCGTATGGAAGAGT ACACCGAAGAGGCGGATAAAATTAACGTGGCGCAATTGTCATAA
Upstream 100 bases:
>100_bases TATAGTTATGCAAATTTATAGCTAAGCAAATCGACAATAGTGACCCATCCCAAGTGGAAGCAACCTAGCCTGCATAAAAT AATGAAAGAGGACGCTTATT
Downstream 100 bases:
>100_bases TATGACCTGAAAACGCTTCGTTATTAAGCAAAACGTCGTTAAACAAAAAGGCCCCGTATCCTTAGGATGCGGGGCCTTTT TTTGCTCGTCTAGATAGCAG
Product: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Products: NA
Alternate protein names: Aconitase 2; 2-methylisocitrate dehydratase; Citrate hydro-lyase 2 [H]
Number of amino acids: Translated: 867; Mature: 867
Protein sequence:
>867_residues MLDAYRKHVEERAQLGTVPLPLSEHQTADLVELLKNPPAGEEEFLMDLLVNRVPAGVDQAAYVKAAFLAAIVKGEATSPL ITKQKAVDILGTMQGGYNVLPLVEALDDAEVAENAAEALKKTLLVFDAFNDVTEKAEAGNAKAKEVVQSWADAEWFLNRP EVPQKSTYTAFKVTGETNTDDLSPAQDAWSRPDIPLHSLAMHKNSRDGITADEEGVRGPMKQIEALKEKGFPLAYVGDVV GTGSSRKSATNSVLWLMGDDIPNVPNKRAGGLVLGGKIAPIFYNTMEDSGALPIENVAVDNINMGDVFDVYPYEGKITKH DSDEVLSTFKLNSNTLLDEVRAGGRIPLIVGRALTNRAREYMGLEHSDVFAKPEQPASSDKGFTLAQKMVGKACGMEGVR PGMYCEPKMTTVGSQDTTGPMTRDELKDLACLGFQADLVMQSFCHTAAYPKPVDVETQHTLPDFIMNRGGVSLRPGDGII HSWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESVRVRFVGERQPGITLRDLVHAIPLQAIK EGYLTVDKKGKINEFNGRILEIEGLEDLTVEQAFELSDASAERSAAGCTITLSEESVTEYLNSNITLLKWMIAEGYGDAR TLSRRIEAMQEWLKNPSLMRADADAEYAIDMTIDMSQIKEPVLCCPNDPDDAKTLSDVAGDKIDEVFIGSCMTNIGHFRA AGKLLQEVPAGSLKTRLWIAPPTKMDARQLMEEGYYNTYAQAGARTEMPGCSLCMGNQARIAPNSTAVSTSTRNFPNRLG QGANVYLASAELAAVAAVLGKLPTNEEYQQYAGMLNSMGGEVYRYMNFDRMEEYTEEADKINVAQLS
Sequences:
>Translated_867_residues MLDAYRKHVEERAQLGTVPLPLSEHQTADLVELLKNPPAGEEEFLMDLLVNRVPAGVDQAAYVKAAFLAAIVKGEATSPL ITKQKAVDILGTMQGGYNVLPLVEALDDAEVAENAAEALKKTLLVFDAFNDVTEKAEAGNAKAKEVVQSWADAEWFLNRP EVPQKSTYTAFKVTGETNTDDLSPAQDAWSRPDIPLHSLAMHKNSRDGITADEEGVRGPMKQIEALKEKGFPLAYVGDVV GTGSSRKSATNSVLWLMGDDIPNVPNKRAGGLVLGGKIAPIFYNTMEDSGALPIENVAVDNINMGDVFDVYPYEGKITKH DSDEVLSTFKLNSNTLLDEVRAGGRIPLIVGRALTNRAREYMGLEHSDVFAKPEQPASSDKGFTLAQKMVGKACGMEGVR PGMYCEPKMTTVGSQDTTGPMTRDELKDLACLGFQADLVMQSFCHTAAYPKPVDVETQHTLPDFIMNRGGVSLRPGDGII HSWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESVRVRFVGERQPGITLRDLVHAIPLQAIK EGYLTVDKKGKINEFNGRILEIEGLEDLTVEQAFELSDASAERSAAGCTITLSEESVTEYLNSNITLLKWMIAEGYGDAR TLSRRIEAMQEWLKNPSLMRADADAEYAIDMTIDMSQIKEPVLCCPNDPDDAKTLSDVAGDKIDEVFIGSCMTNIGHFRA AGKLLQEVPAGSLKTRLWIAPPTKMDARQLMEEGYYNTYAQAGARTEMPGCSLCMGNQARIAPNSTAVSTSTRNFPNRLG QGANVYLASAELAAVAAVLGKLPTNEEYQQYAGMLNSMGGEVYRYMNFDRMEEYTEEADKINVAQLS >Mature_867_residues MLDAYRKHVEERAQLGTVPLPLSEHQTADLVELLKNPPAGEEEFLMDLLVNRVPAGVDQAAYVKAAFLAAIVKGEATSPL ITKQKAVDILGTMQGGYNVLPLVEALDDAEVAENAAEALKKTLLVFDAFNDVTEKAEAGNAKAKEVVQSWADAEWFLNRP EVPQKSTYTAFKVTGETNTDDLSPAQDAWSRPDIPLHSLAMHKNSRDGITADEEGVRGPMKQIEALKEKGFPLAYVGDVV GTGSSRKSATNSVLWLMGDDIPNVPNKRAGGLVLGGKIAPIFYNTMEDSGALPIENVAVDNINMGDVFDVYPYEGKITKH DSDEVLSTFKLNSNTLLDEVRAGGRIPLIVGRALTNRAREYMGLEHSDVFAKPEQPASSDKGFTLAQKMVGKACGMEGVR PGMYCEPKMTTVGSQDTTGPMTRDELKDLACLGFQADLVMQSFCHTAAYPKPVDVETQHTLPDFIMNRGGVSLRPGDGII HSWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESVRVRFVGERQPGITLRDLVHAIPLQAIK EGYLTVDKKGKINEFNGRILEIEGLEDLTVEQAFELSDASAERSAAGCTITLSEESVTEYLNSNITLLKWMIAEGYGDAR TLSRRIEAMQEWLKNPSLMRADADAEYAIDMTIDMSQIKEPVLCCPNDPDDAKTLSDVAGDKIDEVFIGSCMTNIGHFRA AGKLLQEVPAGSLKTRLWIAPPTKMDARQLMEEGYYNTYAQAGARTEMPGCSLCMGNQARIAPNSTAVSTSTRNFPNRLG QGANVYLASAELAAVAAVLGKLPTNEEYQQYAGMLNSMGGEVYRYMNFDRMEEYTEEADKINVAQLS
Specific function: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate as well as the dehydration of 2-methylisocitrate to cis-2-methylaconitate [H]
COG id: COG1049
COG function: function code C; Aconitase B
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aconitase/IPM isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367097, Length=861, Percent_Identity=75.0290360046458, Blast_Score=1322, Evalue=0.0, Organism=Escherichia coli, GI1786259, Length=384, Percent_Identity=26.5625, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015931 - InterPro: IPR015937 - InterPro: IPR001030 - InterPro: IPR015928 - InterPro: IPR015932 - InterPro: IPR018136 - InterPro: IPR004406 - InterPro: IPR015930 - InterPro: IPR015933 - InterPro: IPR015929 [H]
Pfam domain/function: PF00330 Aconitase; PF06434 Aconitase_2_N; PF11791 Aconitase_B_N [H]
EC number: =4.2.1.3; =4.2.1.99 [H]
Molecular weight: Translated: 94256; Mature: 94256
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00450 ACONITASE_1 ; PS01244 ACONITASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAYRKHVEERAQLGTVPLPLSEHQTADLVELLKNPPAGEEEFLMDLLVNRVPAGVDQA CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHH AYVKAAFLAAIVKGEATSPLITKQKAVDILGTMQGGYNVLPLVEALDDAEVAENAAEALK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHH KTLLVFDAFNDVTEKAEAGNAKAKEVVQSWADAEWFLNRPEVPQKSTYTAFKVTGETNTD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEECCCCCC DLSPAQDAWSRPDIPLHSLAMHKNSRDGITADEEGVRGPMKQIEALKEKGFPLAYVGDVV CCCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCEEEECHHH GTGSSRKSATNSVLWLMGDDIPNVPNKRAGGLVLGGKIAPIFYNTMEDSGALPIENVAVD CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCEEEEEEEECCCCCCCCCCCCEEEC NINMGDVFDVYPYEGKITKHDSDEVLSTFKLNSNTLLDEVRAGGRIPLIVGRALTNRARE CCCCCCEEEECCCCCEEECCCCHHHHHHEECCCCHHHHHHHCCCCCEEEECHHHHHHHHH YMGLEHSDVFAKPEQPASSDKGFTLAQKMVGKACGMEGVRPGMYCEPKMTTVGSQDTTGP HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCC MTRDELKDLACLGFQADLVMQSFCHTAAYPKPVDVETQHTLPDFIMNRGGVSLRPGDGII CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHCCCCCEECCCCCHH HSWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESVRVRFVGE HHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCEEHHHHCCCCCCCCCCCCEEEEEEC RQPGITLRDLVHAIPLQAIKEGYLTVDKKGKINEFNGRILEIEGLEDLTVEQAFELSDAS CCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC AERSAAGCTITLSEESVTEYLNSNITLLKWMIAEGYGDARTLSRRIEAMQEWLKNPSLMR HHHCCCCCEEEECHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE ADADAEYAIDMTIDMSQIKEPVLCCPNDPDDAKTLSDVAGDKIDEVFIGSCMTNIGHFRA ECCCCCEEEEEEEEHHHCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AGKLLQEVPAGSLKTRLWIAPPTKMDARQLMEEGYYNTYAQAGARTEMPGCSLCMGNQAR HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEECCCCE IAPNSTAVSTSTRNFPNRLGQGANVYLASAELAAVAAVLGKLPTNEEYQQYAGMLNSMGG ECCCCCEECCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC EVYRYMNFDRMEEYTEEADKINVAQLS HHHHHCCHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure MLDAYRKHVEERAQLGTVPLPLSEHQTADLVELLKNPPAGEEEFLMDLLVNRVPAGVDQA CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHH AYVKAAFLAAIVKGEATSPLITKQKAVDILGTMQGGYNVLPLVEALDDAEVAENAAEALK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHH KTLLVFDAFNDVTEKAEAGNAKAKEVVQSWADAEWFLNRPEVPQKSTYTAFKVTGETNTD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEECCCCCC DLSPAQDAWSRPDIPLHSLAMHKNSRDGITADEEGVRGPMKQIEALKEKGFPLAYVGDVV CCCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCEEEECHHH GTGSSRKSATNSVLWLMGDDIPNVPNKRAGGLVLGGKIAPIFYNTMEDSGALPIENVAVD CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCEEEEEEEECCCCCCCCCCCCEEEC NINMGDVFDVYPYEGKITKHDSDEVLSTFKLNSNTLLDEVRAGGRIPLIVGRALTNRARE CCCCCCEEEECCCCCEEECCCCHHHHHHEECCCCHHHHHHHCCCCCEEEECHHHHHHHHH YMGLEHSDVFAKPEQPASSDKGFTLAQKMVGKACGMEGVRPGMYCEPKMTTVGSQDTTGP HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCC MTRDELKDLACLGFQADLVMQSFCHTAAYPKPVDVETQHTLPDFIMNRGGVSLRPGDGII CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHCCCCCEECCCCCHH HSWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESVRVRFVGE HHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCEEHHHHCCCCCCCCCCCCEEEEEEC RQPGITLRDLVHAIPLQAIKEGYLTVDKKGKINEFNGRILEIEGLEDLTVEQAFELSDAS CCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC AERSAAGCTITLSEESVTEYLNSNITLLKWMIAEGYGDARTLSRRIEAMQEWLKNPSLMR HHHCCCCCEEEECHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE ADADAEYAIDMTIDMSQIKEPVLCCPNDPDDAKTLSDVAGDKIDEVFIGSCMTNIGHFRA ECCCCCEEEEEEEEHHHCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AGKLLQEVPAGSLKTRLWIAPPTKMDARQLMEEGYYNTYAQAGARTEMPGCSLCMGNQAR HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEECCCCE IAPNSTAVSTSTRNFPNRLGQGANVYLASAELAAVAAVLGKLPTNEEYQQYAGMLNSMGG ECCCCCEECCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC EVYRYMNFDRMEEYTEEADKINVAQLS HHHHHCCHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]