| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652692
Identifier: 148652692
GI number: 148652692
Start: 1050702
End: 1051340
Strand: Direct
Name: 148652692
Synonym: PsycPRwf_0885
Alternate gene names: NA
Gene position: 1050702-1051340 (Clockwise)
Preceding gene: 148652686
Following gene: 148652693
Centisome position: 35.27
GC content: 46.64
Gene sequence:
>639_bases ATGCTTAACGGCTTAGACCCTTTTATTATGATTGGAAATACTATTTTGAAATCACTAAATTTATCCAATATAGCTTCTAC CTTACTGCTAACGGGCACTGCGGTGCTGGCAGGCTGTGACAGTCACGATGCCCCTGAGGGTCAGACCATGGACAGTGCAG AGGATGTAACCTCTGCTGCCTCTATCAAAAAGCATGCTGAGCTGTTTGCAGGCTGTTATACCGTCAGCCATGAAGAGCCA GCTCAAATTAAAGTCAGCGAGCAAGCAGGTAAGCTGGTGATGCAAATGAAAGAGCCCAAATCTGCCAATAGAGTATGGGA TGATCCAGAGCCGCTTGAGCCAATGCCCTTAAAGCAGGTAGATAAGTATTTTCCTGTCAAAGCCGAGGACTTAACGGCCA TGATAGGTCGTCCGGATAGAGTGCTGGTAATGGCGAATGTCAAGCAGGCGTATGTCAATATTGACCCCTCATTAGACAGT CCGTATTTGGGCTATATCTTGCAAGGTCAAAACACCATTTATAAAGTGGATTGTGATGACACACCAGCGCAAGAAATGCA GTCCAATCCGCATAGCAATATAGCCGGTATGGAAGAGGTGGGCAAGATCACCATTAGGCCAGCGGGTAAGGTTGAGTAG
Upstream 100 bases:
>100_bases GTGCCCTTAGTATAACAAAAATAGCGACGCTATTTGAGCTGGCGTAGTTAATATTTGATAAGCGTACCCAGAAGGGCTGT AAGTTTGTTAAAATGGCAAT
Downstream 100 bases:
>100_bases CTTGGCCGTTATTTTTGTATCTTCGCTGTTTAAAATGATGATAAGTTAGGTAGGCAAAGCTAAGCCTTATCGAGCCTATG GCATCGGTGGGGCGGCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MLNGLDPFIMIGNTILKSLNLSNIASTLLLTGTAVLAGCDSHDAPEGQTMDSAEDVTSAASIKKHAELFAGCYTVSHEEP AQIKVSEQAGKLVMQMKEPKSANRVWDDPEPLEPMPLKQVDKYFPVKAEDLTAMIGRPDRVLVMANVKQAYVNIDPSLDS PYLGYILQGQNTIYKVDCDDTPAQEMQSNPHSNIAGMEEVGKITIRPAGKVE
Sequences:
>Translated_212_residues MLNGLDPFIMIGNTILKSLNLSNIASTLLLTGTAVLAGCDSHDAPEGQTMDSAEDVTSAASIKKHAELFAGCYTVSHEEP AQIKVSEQAGKLVMQMKEPKSANRVWDDPEPLEPMPLKQVDKYFPVKAEDLTAMIGRPDRVLVMANVKQAYVNIDPSLDS PYLGYILQGQNTIYKVDCDDTPAQEMQSNPHSNIAGMEEVGKITIRPAGKVE >Mature_212_residues MLNGLDPFIMIGNTILKSLNLSNIASTLLLTGTAVLAGCDSHDAPEGQTMDSAEDVTSAASIKKHAELFAGCYTVSHEEP AQIKVSEQAGKLVMQMKEPKSANRVWDDPEPLEPMPLKQVDKYFPVKAEDLTAMIGRPDRVLVMANVKQAYVNIDPSLDS PYLGYILQGQNTIYKVDCDDTPAQEMQSNPHSNIAGMEEVGKITIRPAGKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23046; Mature: 23046
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNGLDPFIMIGNTILKSLNLSNIASTLLLTGTAVLAGCDSHDAPEGQTMDSAEDVTSAA CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHH SIKKHAELFAGCYTVSHEEPAQIKVSEQAGKLVMQMKEPKSANRVWDDPEPLEPMPLKQV HHHHHHHHHHHHEEECCCCCCEEEEHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH DKYFPVKAEDLTAMIGRPDRVLVMANVKQAYVNIDPSLDSPYLGYILQGQNTIYKVDCDD HHHCCCCHHHHHHHHCCCCEEEEEEECEEEEEECCCCCCCCCEEEEEECCCEEEEEECCC TPAQEMQSNPHSNIAGMEEVGKITIRPAGKVE CCHHHHHCCCCCCCCCHHHHCEEEECCCCCCC >Mature Secondary Structure MLNGLDPFIMIGNTILKSLNLSNIASTLLLTGTAVLAGCDSHDAPEGQTMDSAEDVTSAA CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHH SIKKHAELFAGCYTVSHEEPAQIKVSEQAGKLVMQMKEPKSANRVWDDPEPLEPMPLKQV HHHHHHHHHHHHEEECCCCCCEEEEHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH DKYFPVKAEDLTAMIGRPDRVLVMANVKQAYVNIDPSLDSPYLGYILQGQNTIYKVDCDD HHHCCCCHHHHHHHHCCCCEEEEEEECEEEEEECCCCCCCCCEEEEEECCCEEEEEECCC TPAQEMQSNPHSNIAGMEEVGKITIRPAGKVE CCHHHHHCCCCCCCCCHHHHCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA