| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652664
Identifier: 148652664
GI number: 148652664
Start: 1012098
End: 1012526
Strand: Direct
Name: 148652664
Synonym: PsycPRwf_0855
Alternate gene names: NA
Gene position: 1012098-1012526 (Clockwise)
Preceding gene: 148652663
Following gene: 148652665
Centisome position: 33.97
GC content: 46.85
Gene sequence:
>429_bases ATGCACACGTGGATAGATATGGCAAACTTTACGCCGTGGAGCGCCTTGATTGGCGGTATTATGATTGGTCTGGCAGCGTC TATTCTGATTGTCGGTATTGGTAAAATCATGGGTATGAGCGGTATCTTAAAAAGCAGCCTAGTGAGCTTACCTCGCTTTA GCTGGCAGTTGATGTTTGTCATTGGGATGGCCATTACCACTTGGCTTTATAGCTTACTGATTGGATTCCCAGAGCTTGAG ATGGGGCAACCGCTTTGGAAGATTATAGTAGCAGGATTATTGGTTGGCTTTGGAACTCGGTTGGGCTCAGGCTGTACAAG CGGTCACGGTATCTGCGGTATTTCACGTCTGTCGGGTCGCTCAATTACCGCAACCGTACTGTTTTTATTTAGCGGTATTG TCACAGCCACTTTATTTGCGATGGTCTGA
Upstream 100 bases:
>100_bases ATAAGCTTTAGGTCAATAGACGCTATGGCAGTCAGTTCAACATGAGCTCAAGTGCGATGACTGGTAATACAGTGCAATAC AGATAATTAGGAGTGTGAAA
Downstream 100 bases:
>100_bases TAAACTTTGCTTAAGCTATCTAATATCCTCTGTATCGAGATAATAATATGAGCACATCAAATAAAACCAATCCAATGACG CTAATCATCAGTCTATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MHTWIDMANFTPWSALIGGIMIGLAASILIVGIGKIMGMSGILKSSLVSLPRFSWQLMFVIGMAITTWLYSLLIGFPELE MGQPLWKIIVAGLLVGFGTRLGSGCTSGHGICGISRLSGRSITATVLFLFSGIVTATLFAMV
Sequences:
>Translated_142_residues MHTWIDMANFTPWSALIGGIMIGLAASILIVGIGKIMGMSGILKSSLVSLPRFSWQLMFVIGMAITTWLYSLLIGFPELE MGQPLWKIIVAGLLVGFGTRLGSGCTSGHGICGISRLSGRSITATVLFLFSGIVTATLFAMV >Mature_142_residues MHTWIDMANFTPWSALIGGIMIGLAASILIVGIGKIMGMSGILKSSLVSLPRFSWQLMFVIGMAITTWLYSLLIGFPELE MGQPLWKIIVAGLLVGFGTRLGSGCTSGHGICGISRLSGRSITATVLFLFSGIVTATLFAMV
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 15084; Mature: 15084
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTWIDMANFTPWSALIGGIMIGLAASILIVGIGKIMGMSGILKSSLVSLPRFSWQLMFV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IGMAITTWLYSLLIGFPELEMGQPLWKIIVAGLLVGFGTRLGSGCTSGHGICGISRLSGR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCC SITATVLFLFSGIVTATLFAMV HHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MHTWIDMANFTPWSALIGGIMIGLAASILIVGIGKIMGMSGILKSSLVSLPRFSWQLMFV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IGMAITTWLYSLLIGFPELEMGQPLWKIIVAGLLVGFGTRLGSGCTSGHGICGISRLSGR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCC SITATVLFLFSGIVTATLFAMV HHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]