Click here to switch to the map view.

The map label for this gene is msrB [H]

Identifier: 148652625

GI number: 148652625

Start: 970615

End: 971037

Strand: Direct

Name: msrB [H]

Synonym: PsycPRwf_0816

Alternate gene names: 148652625

Gene position: 970615-971037 (Clockwise)

Preceding gene: 148652623

Following gene: 148652626

Centisome position: 32.58

GC content: 51.54

Gene sequence:

>423_bases
ATGCAAGACTCACAATTGACCCCAGAAGAAATCGCCCAATTAACCGACGCAGACTGGCGGGCGCGCTTAAGCGATGAGGA
GTATCGTGTGCTGCGTCAAAAAGGCACAGAGCGTCCTTTTACCGGCATCCATAATGACATGAGCGAGCAGGGCGTGTATC
GCTGTAAAGGCTGCGGTGCCAAATTATTTGATTCAAGCAATAAGTTTGATGCCGGCTGTGGTTGGCCAAGCTTCGATGCC
ACCTTAGATGAGTCGGCCGTAGATGAGCACTTAGATACATCGCATGGCATGCGCCGCGTTGAGGTCACTTGTCGTAATTG
TGGCGGTCATTTGGGACATGTGTTTCCTGATGGCCCCAGAGAAACCACAGGGCTGCGCTACTGCATTAATTCAGTGGCCA
TTGACTTGGAGCCAAAACCCTAA

Upstream 100 bases:

>100_bases
AAGATTAGGCAAAGGGGTGATTGAAGTTATCAAGGATGCCCGCATAATTGACAGTAGCGCACTCAAATAACTGATGATAA
AAATACCAAAAGGACATGTT

Downstream 100 bases:

>100_bases
GTTCAAGGGCAGCGATTGCGGCTAAAATCTAGTAACTGAGGATCTACATTTAAGGACTGAGCTTTTATTAATGATTGAGT
AATGATTGAGCGTCAAGTCT

Product: methionine-R-sulfoxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MQDSQLTPEEIAQLTDADWRARLSDEEYRVLRQKGTERPFTGIHNDMSEQGVYRCKGCGAKLFDSSNKFDAGCGWPSFDA
TLDESAVDEHLDTSHGMRRVEVTCRNCGGHLGHVFPDGPRETTGLRYCINSVAIDLEPKP

Sequences:

>Translated_140_residues
MQDSQLTPEEIAQLTDADWRARLSDEEYRVLRQKGTERPFTGIHNDMSEQGVYRCKGCGAKLFDSSNKFDAGCGWPSFDA
TLDESAVDEHLDTSHGMRRVEVTCRNCGGHLGHVFPDGPRETTGLRYCINSVAIDLEPKP
>Mature_140_residues
MQDSQLTPEEIAQLTDADWRARLSDEEYRVLRQKGTERPFTGIHNDMSEQGVYRCKGCGAKLFDSSNKFDAGCGWPSFDA
TLDESAVDEHLDTSHGMRRVEVTCRNCGGHLGHVFPDGPRETTGLRYCINSVAIDLEPKP

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=125, Percent_Identity=46.4, Blast_Score=125, Evalue=8e-30,
Organism=Homo sapiens, GI301336162, Length=125, Percent_Identity=46.4, Blast_Score=125, Evalue=8e-30,
Organism=Homo sapiens, GI73089054, Length=125, Percent_Identity=46.4, Blast_Score=125, Evalue=8e-30,
Organism=Homo sapiens, GI37620216, Length=125, Percent_Identity=46.4, Blast_Score=125, Evalue=1e-29,
Organism=Homo sapiens, GI117606353, Length=133, Percent_Identity=45.8646616541353, Blast_Score=125, Evalue=2e-29,
Organism=Escherichia coli, GI1788077, Length=119, Percent_Identity=48.7394957983193, Blast_Score=119, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17553450, Length=133, Percent_Identity=51.1278195488722, Blast_Score=139, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI115532676, Length=144, Percent_Identity=47.9166666666667, Blast_Score=139, Evalue=5e-34,
Organism=Saccharomyces cerevisiae, GI6319816, Length=128, Percent_Identity=42.1875, Blast_Score=105, Evalue=2e-24,
Organism=Drosophila melanogaster, GI45553335, Length=128, Percent_Identity=46.875, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI21356369, Length=128, Percent_Identity=46.875, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24645799, Length=128, Percent_Identity=46.875, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI221378664, Length=128, Percent_Identity=46.875, Blast_Score=123, Evalue=3e-29,
Organism=Drosophila melanogaster, GI221378662, Length=135, Percent_Identity=44.4444444444444, Blast_Score=120, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24645801, Length=139, Percent_Identity=43.8848920863309, Blast_Score=119, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24645804, Length=139, Percent_Identity=43.8848920863309, Blast_Score=119, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 15648; Mature: 15648

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSQLTPEEIAQLTDADWRARLSDEEYRVLRQKGTERPFTGIHNDMSEQGVYRCKGCGA
CCCCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCCCC
KLFDSSNKFDAGCGWPSFDATLDESAVDEHLDTSHGMRRVEVTCRNCGGHLGHVFPDGPR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCCCCCCCC
ETTGLRYCINSVAIDLEPKP
CHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure
MQDSQLTPEEIAQLTDADWRARLSDEEYRVLRQKGTERPFTGIHNDMSEQGVYRCKGCGA
CCCCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCCCC
KLFDSSNKFDAGCGWPSFDATLDESAVDEHLDTSHGMRRVEVTCRNCGGHLGHVFPDGPR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCCCCCCCC
ETTGLRYCINSVAIDLEPKP
CHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA