| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is yhhW [H]
Identifier: 148652433
GI number: 148652433
Start: 747329
End: 748036
Strand: Direct
Name: yhhW [H]
Synonym: PsycPRwf_0621
Alternate gene names: 148652433
Gene position: 747329-748036 (Clockwise)
Preceding gene: 148652432
Following gene: 148652434
Centisome position: 25.09
GC content: 44.35
Gene sequence:
>708_bases ATGAAAACTATCTTACACAGATCAAATACTCGTGGTGACGCTGACCATGGCTGGCTAAAAAGTAAACATACCTTTAGCTT CGCCAACTATTACAACCCTGCTCGTATGGGCTTTGGTGCTCTACGTGTGATTAATGATGATCACGTAGAAGGGGGTAATG GTTTTGGTACGCATCCTCACCGTGATATGGAAATTATTTCTATTCCAACCTCAGGTAGACTTGCGCATAAAGACTCTATC GGCACAAACGGCATCATCGAAAGTGGTGAGATCCAAGTTATGTCTGCTGGTACCGGTATTGTGCACAGTGAGATGAATGG CACCGCCAATGAGCCAGTAAAATTCTTCCAAATTTGGGTTGTGCCTAACAAGCAAGGTGTTCAGCCTCGTTATCAGCAGT TAAAAATCGCTGATATGTTACAGCCTAATGAGTTTGGTCAGATTTTATCGCCCAACCCAGACGACGCTGGCGTATGGATT CACCAAGATGCCTGGTTCCACATGGGTGATCTAGATAAGGGCGTAACCGCTCATTACGATCTAAAAAATAAAAATAATGG CGTCTATGCATTGGTTATTGAAGGTCGAGTCAAGATTGGTGATGAAATCCTAGACAGACGTGATGGCATGGGTATCACAG AGGTAACAGGCTTTGATGTAGAAGCCTTAGCGGACTCTCGCGTGTTACTGATGGAAGTACCGGTTTAA
Upstream 100 bases:
>100_bases TTACACAATTAAACTAAAGTTAACAGTCAGGAATATTGGTTAAGCTCAAATGTATGATATAATGACCTCGTTTAATTGAT ACTAAGAATAAGGACACCCT
Downstream 100 bases:
>100_bases GGTAATCTTCACTGCCTAAAGCCTTAGAACGACAACAAAAAGCCAAACTTTCGAGTTTGGCTTTTTTATCATCTTTAAGA TAAGCTAGGATAAAGATTTG
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Probable quercetinase [H]
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKTILHRSNTRGDADHGWLKSKHTFSFANYYNPARMGFGALRVINDDHVEGGNGFGTHPHRDMEIISIPTSGRLAHKDSI GTNGIIESGEIQVMSAGTGIVHSEMNGTANEPVKFFQIWVVPNKQGVQPRYQQLKIADMLQPNEFGQILSPNPDDAGVWI HQDAWFHMGDLDKGVTAHYDLKNKNNGVYALVIEGRVKIGDEILDRRDGMGITEVTGFDVEALADSRVLLMEVPV
Sequences:
>Translated_235_residues MKTILHRSNTRGDADHGWLKSKHTFSFANYYNPARMGFGALRVINDDHVEGGNGFGTHPHRDMEIISIPTSGRLAHKDSI GTNGIIESGEIQVMSAGTGIVHSEMNGTANEPVKFFQIWVVPNKQGVQPRYQQLKIADMLQPNEFGQILSPNPDDAGVWI HQDAWFHMGDLDKGVTAHYDLKNKNNGVYALVIEGRVKIGDEILDRRDGMGITEVTGFDVEALADSRVLLMEVPV >Mature_235_residues MKTILHRSNTRGDADHGWLKSKHTFSFANYYNPARMGFGALRVINDDHVEGGNGFGTHPHRDMEIISIPTSGRLAHKDSI GTNGIIESGEIQVMSAGTGIVHSEMNGTANEPVKFFQIWVVPNKQGVQPRYQQLKIADMLQPNEFGQILSPNPDDAGVWI HQDAWFHMGDLDKGVTAHYDLKNKNNGVYALVIEGRVKIGDEILDRRDGMGITEVTGFDVEALADSRVLLMEVPV
Specific function: Has quercetin 2,3-dioxygenase activity [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=105, Percent_Identity=38.0952380952381, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4505823, Length=105, Percent_Identity=38.0952380952381, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1789847, Length=230, Percent_Identity=43.0434782608696, Blast_Score=195, Evalue=2e-51, Organism=Escherichia coli, GI1789493, Length=231, Percent_Identity=28.1385281385281, Blast_Score=102, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 26018; Mature: 26018
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTILHRSNTRGDADHGWLKSKHTFSFANYYNPARMGFGALRVINDDHVEGGNGFGTHPH CCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCHHHCCCEEEEEECCCCCCCCCCCCCCCC RDMEIISIPTSGRLAHKDSIGTNGIIESGEIQVMSAGTGIVHSEMNGTANEPVKFFQIWV CCEEEEEECCCCCEEECCCCCCCCCEECCCEEEEECCCCEEEECCCCCCCCCEEEEEEEE VPNKQGVQPRYQQLKIADMLQPNEFGQILSPNPDDAGVWIHQDAWFHMGDLDKGVTAHYD ECCCCCCCHHHHHEEHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCEEEEE LKNKNNGVYALVIEGRVKIGDEILDRRDGMGITEVTGFDVEALADSRVLLMEVPV ECCCCCCEEEEEEECCEEECHHHHHHHCCCCEEEECCCCHHHHCCCCEEEEEECC >Mature Secondary Structure MKTILHRSNTRGDADHGWLKSKHTFSFANYYNPARMGFGALRVINDDHVEGGNGFGTHPH CCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCHHHCCCEEEEEECCCCCCCCCCCCCCCC RDMEIISIPTSGRLAHKDSIGTNGIIESGEIQVMSAGTGIVHSEMNGTANEPVKFFQIWV CCEEEEEECCCCCEEECCCCCCCCCEECCCEEEEECCCCEEEECCCCCCCCCEEEEEEEE VPNKQGVQPRYQQLKIADMLQPNEFGQILSPNPDDAGVWIHQDAWFHMGDLDKGVTAHYD ECCCCCCCHHHHHEEHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCEEEEE LKNKNNGVYALVIEGRVKIGDEILDRRDGMGITEVTGFDVEALADSRVLLMEVPV ECCCCCCEEEEEEECCEEECHHHHHHHCCCCEEEECCCCHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]