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The map label for this gene is rpe [H]

Identifier: 148652396

GI number: 148652396

Start: 703692

End: 704402

Strand: Direct

Name: rpe [H]

Synonym: PsycPRwf_0584

Alternate gene names: 148652396

Gene position: 703692-704402 (Clockwise)

Preceding gene: 148652395

Following gene: 148652397

Centisome position: 23.62

GC content: 47.82

Gene sequence:

>711_bases
ATGAGCAGCACCCAATCAGCAGCTACCCCACGTGAGTATCTAATAGCCCCCTCCATTCTTTCTGCAGATTTTGCCCGCTT
GGGTGAAGAGGTAGAGACGGTATTGCAAGCTGGGGCCGATGTGATTCACTTTGATGTGATGGACAACCACTATGTGCCAA
ACCTCACCTTCGGCAGCATGATTTGTAAAGCACTGCGTGATTACGGCATCGACGCGCCCATCGATGTGCATTTAATGGTA
TCACCGGTTGACAGTATGATTGAGCAGTTCTTAGAGTCCGGTGCCAGTATCATCACCTTCCACCCTGAAGCAAGCAATCA
CATCGACCGCTCATTACAAATGATCAAAGATGGCGGTGCAAAATGTGGTTTGGTATTAAACCCAGCCACGCCGCTGCATT
ATCTAGATTATGTGATGGATAAAGTGGATCAAATCTTATTGATGAGCGTCAACCCAGGTTTTGGTGGTCAGTCTTTTATT
GACGGTACGTTAGACAAGATCAAACAAGTGCGTCAGCGTATCGATGCCAGCGGTCGTGACATTCGTCTAGAAGTAGATGG
CGGCGTAAAAGCCAATAACATTAGAGCCATTGCTGAAGCGGGCGCTGATATGTTTGTGGCAGGCTCAGCCATTTTTAATC
AGCCAGACTATAAACAGGCTATTGATGAGATGCGCCATGAGCTAAGTCTAGTGGGTGCCCATCAAGCCTAG

Upstream 100 bases:

>100_bases
GCCGCATTAACTGCCATATAATTGGTATAATAGCTGGGTTTAATGGCCATTAAGCCCAGCGACATTTCTTTTATTCTCCT
CCAATTCTTAGAGAAACAGT

Downstream 100 bases:

>100_bases
TTTTTATCAAATTAGCTCAAGGATTTGATTTAATCTTTGGTAAATGGGTCATAAGCGAGGACAGATAAGATGACAAATAA
TGAGTTGATAGATAAAGTGG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSSTQSAATPREYLIAPSILSADFARLGEEVETVLQAGADVIHFDVMDNHYVPNLTFGSMICKALRDYGIDAPIDVHLMV
SPVDSMIEQFLESGASIITFHPEASNHIDRSLQMIKDGGAKCGLVLNPATPLHYLDYVMDKVDQILLMSVNPGFGGQSFI
DGTLDKIKQVRQRIDASGRDIRLEVDGGVKANNIRAIAEAGADMFVAGSAIFNQPDYKQAIDEMRHELSLVGAHQA

Sequences:

>Translated_236_residues
MSSTQSAATPREYLIAPSILSADFARLGEEVETVLQAGADVIHFDVMDNHYVPNLTFGSMICKALRDYGIDAPIDVHLMV
SPVDSMIEQFLESGASIITFHPEASNHIDRSLQMIKDGGAKCGLVLNPATPLHYLDYVMDKVDQILLMSVNPGFGGQSFI
DGTLDKIKQVRQRIDASGRDIRLEVDGGVKANNIRAIAEAGADMFVAGSAIFNQPDYKQAIDEMRHELSLVGAHQA
>Mature_235_residues
SSTQSAATPREYLIAPSILSADFARLGEEVETVLQAGADVIHFDVMDNHYVPNLTFGSMICKALRDYGIDAPIDVHLMVS
PVDSMIEQFLESGASIITFHPEASNHIDRSLQMIKDGGAKCGLVLNPATPLHYLDYVMDKVDQILLMSVNPGFGGQSFID
GTLDKIKQVRQRIDASGRDIRLEVDGGVKANNIRAIAEAGADMFVAGSAIFNQPDYKQAIDEMRHELSLVGAHQA

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=216, Percent_Identity=39.3518518518519, Blast_Score=163, Evalue=1e-40,
Organism=Homo sapiens, GI219879828, Length=213, Percent_Identity=37.5586854460094, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI24307923, Length=172, Percent_Identity=31.9767441860465, Blast_Score=95, Evalue=6e-20,
Organism=Escherichia coli, GI1789788, Length=221, Percent_Identity=75.1131221719457, Blast_Score=348, Evalue=2e-97,
Organism=Escherichia coli, GI1790523, Length=211, Percent_Identity=36.4928909952607, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1790754, Length=211, Percent_Identity=27.4881516587678, Blast_Score=92, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17552948, Length=217, Percent_Identity=38.2488479262673, Blast_Score=159, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6322341, Length=228, Percent_Identity=35.9649122807018, Blast_Score=148, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24586301, Length=216, Percent_Identity=38.8888888888889, Blast_Score=161, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 25675; Mature: 25543

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00074 GLFV_DEHYDROGENASE ; PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTQSAATPREYLIAPSILSADFARLGEEVETVLQAGADVIHFDVMDNHYVPNLTFGSM
CCCCCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHH
ICKALRDYGIDAPIDVHLMVSPVDSMIEQFLESGASIITFHPEASNHIDRSLQMIKDGGA
HHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCC
KCGLVLNPATPLHYLDYVMDKVDQILLMSVNPGFGGQSFIDGTLDKIKQVRQRIDASGRD
EEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
IRLEVDGGVKANNIRAIAEAGADMFVAGSAIFNQPDYKQAIDEMRHELSLVGAHQA
EEEEECCCCCCCHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSTQSAATPREYLIAPSILSADFARLGEEVETVLQAGADVIHFDVMDNHYVPNLTFGSM
CCCCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHH
ICKALRDYGIDAPIDVHLMVSPVDSMIEQFLESGASIITFHPEASNHIDRSLQMIKDGGA
HHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCC
KCGLVLNPATPLHYLDYVMDKVDQILLMSVNPGFGGQSFIDGTLDKIKQVRQRIDASGRD
EEEEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
IRLEVDGGVKANNIRAIAEAGADMFVAGSAIFNQPDYKQAIDEMRHELSLVGAHQA
EEEEECCCCCCCHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]