Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148652375

Identifier: 148652375

GI number: 148652375

Start: 675528

End: 676490

Strand: Direct

Name: 148652375

Synonym: PsycPRwf_0563

Alternate gene names: NA

Gene position: 675528-676490 (Clockwise)

Preceding gene: 148652372

Following gene: 148652379

Centisome position: 22.68

GC content: 45.9

Gene sequence:

>963_bases
ATGATAAAAATAAAGGATGCGGGCCAATTACCGGCCATAGGATTGGTCATTGGGTGCGTCATTTTTGGACTAGGCAGTCT
AATTGTGGCTCATGTGGATGTGGGCGGCTATGCCATGGCCTTTTGGCGATTGGCCATATCCGGAATAGTGTTTACCTTAT
TGGCCGCTGTGTTCGGTCAAAAAATGCCAGTCGACAAAGGCAGTCAAGCCAATAAAAAAGCATTTATATTTGCGCTGCTG
TCGGGGGTGTTTTTAGGGTTTGATTTGGCACTGTGGCACGAAAGCATTTATGCAGTGGGCCCAGGCATATCAACCTTATT
AAATAGCTTACAGATTTTCTTTTTAGCAGCGCTTGGGTTTTTGTTATTTAAAGAGCGTCAAACCATAATTCAGCTCATCA
GCCTCATCATTGCGCTGGCAGGCGTCGTGTTTATTGCTAGCCCTGAGTTTGCCAATAACAATCATGCCGCTTACGGGTTT
ATCACCGGCATCGTCTCAGCGGCTATGTTAGCGGCCTCAATGACTTTTATCCGCTTAACTCATCAAAACGCGCCCACACC
GATTTTTATCTTGATGCAGCGTATTAGTATTGGCGGCAGTCTGGCAATGCTTATCCCCATGTTTTTATTTGATGCTGGCA
AAATACTGCCCAACTCTTTGGCGGAGATAGGCTGGATATTGATATATGGAACGGTGATGCAGTGCTTGGCATGGGGACTT
ATCGCCTACTCAATCCCTAAGCTGTCTTTGGCATTAACCGGACTGCTGCTGCTGACAGAGCCTGTGGCTGCGTTATTTAT
TGATTACTTTTGGTTAGATAAGCCAATCAATACCATCCAATGGACGGGAGCTGCCCTGACCATGTTTGCCATTTATTTAG
GATCATTAAAGCCCAAGCCCTTTAATGAGACACTCAAGCTGCGCCGCTATCGATTCTTTGCAAAGTTTTATCGGCGCCGT
TAG

Upstream 100 bases:

>100_bases
AACCCACTTTAAGCTTATTTTGCAACACATTTAAGTCTGGGAATTTTAGAAAAATATTGGCCCTAAGTGGCCGATAGATT
TGAACGCGCTAGGTTGGTAT

Downstream 100 bases:

>100_bases
TAGTCACATCAACCGTTAGAAGTTAAGTAAATAGCTATTCAGTTAGGACTGCCAAAAAAAAGCCGAGCTTTGACAGCTCG
GCTTTTTTAACGGTAGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: DMT Superfamily Efflux Pump; Permease Of Drug/Metabolite Transporter Superfamily

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MIKIKDAGQLPAIGLVIGCVIFGLGSLIVAHVDVGGYAMAFWRLAISGIVFTLLAAVFGQKMPVDKGSQANKKAFIFALL
SGVFLGFDLALWHESIYAVGPGISTLLNSLQIFFLAALGFLLFKERQTIIQLISLIIALAGVVFIASPEFANNNHAAYGF
ITGIVSAAMLAASMTFIRLTHQNAPTPIFILMQRISIGGSLAMLIPMFLFDAGKILPNSLAEIGWILIYGTVMQCLAWGL
IAYSIPKLSLALTGLLLLTEPVAALFIDYFWLDKPINTIQWTGAALTMFAIYLGSLKPKPFNETLKLRRYRFFAKFYRRR

Sequences:

>Translated_320_residues
MIKIKDAGQLPAIGLVIGCVIFGLGSLIVAHVDVGGYAMAFWRLAISGIVFTLLAAVFGQKMPVDKGSQANKKAFIFALL
SGVFLGFDLALWHESIYAVGPGISTLLNSLQIFFLAALGFLLFKERQTIIQLISLIIALAGVVFIASPEFANNNHAAYGF
ITGIVSAAMLAASMTFIRLTHQNAPTPIFILMQRISIGGSLAMLIPMFLFDAGKILPNSLAEIGWILIYGTVMQCLAWGL
IAYSIPKLSLALTGLLLLTEPVAALFIDYFWLDKPINTIQWTGAALTMFAIYLGSLKPKPFNETLKLRRYRFFAKFYRRR
>Mature_320_residues
MIKIKDAGQLPAIGLVIGCVIFGLGSLIVAHVDVGGYAMAFWRLAISGIVFTLLAAVFGQKMPVDKGSQANKKAFIFALL
SGVFLGFDLALWHESIYAVGPGISTLLNSLQIFFLAALGFLLFKERQTIIQLISLIIALAGVVFIASPEFANNNHAAYGF
ITGIVSAAMLAASMTFIRLTHQNAPTPIFILMQRISIGGSLAMLIPMFLFDAGKILPNSLAEIGWILIYGTVMQCLAWGL
IAYSIPKLSLALTGLLLLTEPVAALFIDYFWLDKPINTIQWTGAALTMFAIYLGSLKPKPFNETLKLRRYRFFAKFYRRR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35022; Mature: 35022

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIKDAGQLPAIGLVIGCVIFGLGSLIVAHVDVGGYAMAFWRLAISGIVFTLLAAVFGQ
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KMPVDKGSQANKKAFIFALLSGVFLGFDLALWHESIYAVGPGISTLLNSLQIFFLAALGF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LLFKERQTIIQLISLIIALAGVVFIASPEFANNNHAAYGFITGIVSAAMLAASMTFIRLT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEE
HQNAPTPIFILMQRISIGGSLAMLIPMFLFDAGKILPNSLAEIGWILIYGTVMQCLAWGL
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHHH
IAYSIPKLSLALTGLLLLTEPVAALFIDYFWLDKPINTIQWTGAALTMFAIYLGSLKPKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECHHHHHHHHHHHHCCCCCC
FNETLKLRRYRFFAKFYRRR
CHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKIKDAGQLPAIGLVIGCVIFGLGSLIVAHVDVGGYAMAFWRLAISGIVFTLLAAVFGQ
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KMPVDKGSQANKKAFIFALLSGVFLGFDLALWHESIYAVGPGISTLLNSLQIFFLAALGF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LLFKERQTIIQLISLIIALAGVVFIASPEFANNNHAAYGFITGIVSAAMLAASMTFIRLT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEE
HQNAPTPIFILMQRISIGGSLAMLIPMFLFDAGKILPNSLAEIGWILIYGTVMQCLAWGL
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHHH
IAYSIPKLSLALTGLLLLTEPVAALFIDYFWLDKPINTIQWTGAALTMFAIYLGSLKPKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECHHHHHHHHHHHHCCCCCC
FNETLKLRRYRFFAKFYRRR
CHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA