| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652372
Identifier: 148652372
GI number: 148652372
Start: 671087
End: 671971
Strand: Direct
Name: 148652372
Synonym: PsycPRwf_0560
Alternate gene names: NA
Gene position: 671087-671971 (Clockwise)
Preceding gene: 148652371
Following gene: 148652375
Centisome position: 22.53
GC content: 43.05
Gene sequence:
>885_bases ATGGCTGATGCGGATGTCACTTTTAGCGATTTAATTAAAAGAGGGCGGCAATGCTTTGCCTATCCTTCAAGGCATGCCGA AAAGCGCATTAGACAACGCACCTCACTGACGCCAAAAGAGCTGATGCTTTTGCTCGATGAGAATGTGTGTGTTGATATCA GTCAGAAATATGGGCTAAGCAAACGTCATTTATTGTTTTATAGCCCGAAAGATAAATACTATTATGTGGCTCTACAGAAT GTGAACACAGGCAAAGTCATCACTGTGTGGCATCTAAACTACCATCGCCAATTGGCATGGTCAGTGACCCAAGAGCAGTG CGCAAAAGCCCGTAAGATTTATCATGACTATTTATGTGAGCAGCAAACTGCTAAAGCAGATGACAATGAACCATTATCAT GCCAGCCAGAAGCAACAGCCTGTAGTAAGCAAGCCAACAAAAGATGCAAGCAAGTCACGGCTTTTAAACGGGTTTATAAG GTATATGTCAAAGCGTCTTATATCTGCGAGTCGGGGCAAGCCAAAAGAAAGACCTTGCTAACACTAGAGGTTGATTATTA TATTAATGACTTTGAACGCAGTATTAAATCACTGCTAAAACAGGACGAGACGCTGTTTGATAAAATCAATCATCAAATTT GGCGCAAACGCCTGTTTCACGAGAGTATTTACGCCATTGTTTTTGTGAATAAAAAAGACCTGACCGACACTTATTTGATT GATGTCAGGCCGCACTGGGTCGCCCTAGAACAGGCGCAAAAGATTGCCCATAAGCGCAAAGTCATGAATCGCTTATTGCT CGATTATCAAACCCCATATGTCTCTTTGCCACTACCCATCTCAATGCGGCTACTGAGGCTGCCTATGCCTATGCCTACAA GCTGA
Upstream 100 bases:
>100_bases TGTTTTTGTCTAAAAATAAGCGCACTATACCTGCGCATATTTAATGCTATTATATTAAAGGTATTTGATAGAGTTTATTT AACTGGATGAAACAAAAATC
Downstream 100 bases:
>100_bases CCATAATAGTCAGTTAGATAACACAGGTTGATGCTAAAGCGCTTGAGCGTGTTGTTTGATAACATGTTTTGGACTTTTGA TTGACATAAGAAAGCCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MADADVTFSDLIKRGRQCFAYPSRHAEKRIRQRTSLTPKELMLLLDENVCVDISQKYGLSKRHLLFYSPKDKYYYVALQN VNTGKVITVWHLNYHRQLAWSVTQEQCAKARKIYHDYLCEQQTAKADDNEPLSCQPEATACSKQANKRCKQVTAFKRVYK VYVKASYICESGQAKRKTLLTLEVDYYINDFERSIKSLLKQDETLFDKINHQIWRKRLFHESIYAIVFVNKKDLTDTYLI DVRPHWVALEQAQKIAHKRKVMNRLLLDYQTPYVSLPLPISMRLLRLPMPMPTS
Sequences:
>Translated_294_residues MADADVTFSDLIKRGRQCFAYPSRHAEKRIRQRTSLTPKELMLLLDENVCVDISQKYGLSKRHLLFYSPKDKYYYVALQN VNTGKVITVWHLNYHRQLAWSVTQEQCAKARKIYHDYLCEQQTAKADDNEPLSCQPEATACSKQANKRCKQVTAFKRVYK VYVKASYICESGQAKRKTLLTLEVDYYINDFERSIKSLLKQDETLFDKINHQIWRKRLFHESIYAIVFVNKKDLTDTYLI DVRPHWVALEQAQKIAHKRKVMNRLLLDYQTPYVSLPLPISMRLLRLPMPMPTS >Mature_293_residues ADADVTFSDLIKRGRQCFAYPSRHAEKRIRQRTSLTPKELMLLLDENVCVDISQKYGLSKRHLLFYSPKDKYYYVALQNV NTGKVITVWHLNYHRQLAWSVTQEQCAKARKIYHDYLCEQQTAKADDNEPLSCQPEATACSKQANKRCKQVTAFKRVYKV YVKASYICESGQAKRKTLLTLEVDYYINDFERSIKSLLKQDETLFDKINHQIWRKRLFHESIYAIVFVNKKDLTDTYLID VRPHWVALEQAQKIAHKRKVMNRLLLDYQTPYVSLPLPISMRLLRLPMPMPTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34635; Mature: 34503
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADADVTFSDLIKRGRQCFAYPSRHAEKRIRQRTSLTPKELMLLLDENVCVDISQKYGLS CCCCCCCHHHHHHCCHHEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHCCCC KRHLLFYSPKDKYYYVALQNVNTGKVITVWHLNYHRQLAWSVTQEQCAKARKIYHDYLCE CCEEEEECCCCCEEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC QQTAKADDNEPLSCQPEATACSKQANKRCKQVTAFKRVYKVYVKASYICESGQAKRKTLL HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE TLEVDYYINDFERSIKSLLKQDETLFDKINHQIWRKRLFHESIYAIVFVNKKDLTDTYLI EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEE DVRPHWVALEQAQKIAHKRKVMNRLLLDYQTPYVSLPLPISMRLLRLPMPMPTS ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCCC >Mature Secondary Structure ADADVTFSDLIKRGRQCFAYPSRHAEKRIRQRTSLTPKELMLLLDENVCVDISQKYGLS CCCCCCHHHHHHCCHHEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHCCCC KRHLLFYSPKDKYYYVALQNVNTGKVITVWHLNYHRQLAWSVTQEQCAKARKIYHDYLCE CCEEEEECCCCCEEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC QQTAKADDNEPLSCQPEATACSKQANKRCKQVTAFKRVYKVYVKASYICESGQAKRKTLL HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE TLEVDYYINDFERSIKSLLKQDETLFDKINHQIWRKRLFHESIYAIVFVNKKDLTDTYLI EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEE DVRPHWVALEQAQKIAHKRKVMNRLLLDYQTPYVSLPLPISMRLLRLPMPMPTS ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA