| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652234
Identifier: 148652234
GI number: 148652234
Start: 518955
End: 519443
Strand: Direct
Name: 148652234
Synonym: PsycPRwf_0422
Alternate gene names: NA
Gene position: 518955-519443 (Clockwise)
Preceding gene: 148652233
Following gene: 148652235
Centisome position: 17.42
GC content: 44.79
Gene sequence:
>489_bases ATGATCAAGTCTCCCTTAAGCCCGTTACAATCTTTGCTGTTGGTTATTGCAAGTTTTGTGGCGGCTTCTGTCGTTAATAT CTACCCGCTTAGTTTGGATGCCTCGAAGCTACGGCCCATGGCACTTATTATGGTGCTTATTTTTTGGCTTATCTATAAAC CGCGCTATGTGGGGGTGGTGACCGCTTTTGCCATTGGTATTATCTCAGACTTGTTGTTAGATACCCGCTTAGGGCAGCAG GGATTTGCGGCAGTGATTATGGCGTTTTCGCTACGTTTTGTTGGGCAGTATATCAAGCAAGTTAATCTGCCCGTTGCTTG GACGGTGGCGACAGGGGCACTTATCGTGTTTCAGCTGACGTTATGGATTGTGCAATACCTGACCCAGAACATATTTTATG CCAGTGCAATTTTTAGCTTATTGGTCAGTGTCATTAGCTGGCCGTTGGTATTTTTTGGATTGCACCGTTTTATCAACAAG TATTCATAG
Upstream 100 bases:
>100_bases TTTAGCAACCCTGTGTCTTTGGTTCAAAAACTAGGTGATTTTGCTACATTTTTGAATTAAGATTTTGAACTTAGGTTTCT TAACAGGCGCTACCGCAATT
Downstream 100 bases:
>100_bases CCCTAAGTGCATAACCAGTCATACCTTTAACATACCAAGTGCTGTCTGTTTTGTGCGCTCACTTTTAATCATTCATTTAA TATGGATAACCCAGCCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: Rod Shape-Determining Protein
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MIKSPLSPLQSLLLVIASFVAASVVNIYPLSLDASKLRPMALIMVLIFWLIYKPRYVGVVTAFAIGIISDLLLDTRLGQQ GFAAVIMAFSLRFVGQYIKQVNLPVAWTVATGALIVFQLTLWIVQYLTQNIFYASAIFSLLVSVISWPLVFFGLHRFINK YS
Sequences:
>Translated_162_residues MIKSPLSPLQSLLLVIASFVAASVVNIYPLSLDASKLRPMALIMVLIFWLIYKPRYVGVVTAFAIGIISDLLLDTRLGQQ GFAAVIMAFSLRFVGQYIKQVNLPVAWTVATGALIVFQLTLWIVQYLTQNIFYASAIFSLLVSVISWPLVFFGLHRFINK YS >Mature_162_residues MIKSPLSPLQSLLLVIASFVAASVVNIYPLSLDASKLRPMALIMVLIFWLIYKPRYVGVVTAFAIGIISDLLLDTRLGQQ GFAAVIMAFSLRFVGQYIKQVNLPVAWTVATGALIVFQLTLWIVQYLTQNIFYASAIFSLLVSVISWPLVFFGLHRFINK YS
Specific function: Unknown
COG id: COG2891
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18090; Mature: 18090
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSPLSPLQSLLLVIASFVAASVVNIYPLSLDASKLRPMALIMVLIFWLIYKPRYVGVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH TAFAIGIISDLLLDTRLGQQGFAAVIMAFSLRFVGQYIKQVNLPVAWTVATGALIVFQLT HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LWIVQYLTQNIFYASAIFSLLVSVISWPLVFFGLHRFINKYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKSPLSPLQSLLLVIASFVAASVVNIYPLSLDASKLRPMALIMVLIFWLIYKPRYVGVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH TAFAIGIISDLLLDTRLGQQGFAAVIMAFSLRFVGQYIKQVNLPVAWTVATGALIVFQLT HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LWIVQYLTQNIFYASAIFSLLVSVISWPLVFFGLHRFINKYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA