| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is mreC [H]
Identifier: 148652233
GI number: 148652233
Start: 517821
End: 518741
Strand: Direct
Name: mreC [H]
Synonym: PsycPRwf_0421
Alternate gene names: 148652233
Gene position: 517821-518741 (Clockwise)
Preceding gene: 148652232
Following gene: 148652234
Centisome position: 17.38
GC content: 47.56
Gene sequence:
>921_bases ATGCCAACAAGCATCTTTGCTCAGTACAGTCTATCGTTACGAAAAACAGCGGCCGTGTTATTGGTCGCTATGATTTTGAT GTTACTGGATAGCAAAAACCCTGACTGGTTCACACCAATCCGTGATACCAGTCATTCGGCCATGCAGCCTATTTATCAGA TGTCTGTGCTGCCAAGTTTTGTGAGTCACTGGGCAGATGGCACTTTGATGAGTAAAGAGGCGCTGCGTCGCGAAAACGTA CAGCTGCATGCCCAATTGTTGCATGCTCAAGCCAAACTACAGCAGCAGGATTATGTGTTGGCCCAAAACGCCCGCTTGCA AGGCATCTTGTCGACGACCAAGCCGGATCAATATGATTTGAATTTGGCACAGGTTATCGGCACAGATACCAACCCCCTAA AGCAGATTGTGGTGCTGAATAAAGGCAGCAATGATGGGGTGGAAGTCGGTCAGACCGCGATCGATGAAAATGGCATCTTG GGACAAATTATTAATGTGTATCCCAATACCAGCCGTTTGTTATTAATCACTGATGAATTGCAGTCAGTGTCAGTGACAGT GCGACGTACCGGTCAGCGTGCTATTGTTTCAGGGGAGGGCACGCCAAGCTCCTTGAAGCTGGATTATATATTTAAGACCT CAGATATCCGAGTCGGTGATGAGCTCATATCATCAGGGCTCGGTGGCCGGTTTCCAGCTGGATATCGTGTGGGCCGTATT GAATATATTAATCCTGAGCAAAATGATAATTTTATGAATATCGAAGTAACGCCCGCAGCTGATTTTGTGAACAGCTCGTA TGTGCTCATTATGCAAGACAGCAAGCACTCTCCGCGTTATTCCGATGACAGCTTTACCGGGTCATTAGAGCTTACTCAGG CCCCGTATGTGCCCCCAAGCCGTCCTATTGATGAGCCTTAG
Upstream 100 bases:
>100_bases TTAACGTGTGTGAGCCGTGGCGGCGGTGCTGCATTAGCATTTATCAATAATAAAAGTCTTAATATGATTTTTGTGTAGCC GATGAGTTTATAAATTTAAT
Downstream 100 bases:
>100_bases CCTGTCTAAGCTGGTCTATGGCAGGCAGCAAGCTCGTCGTTAAACACTAAGCCAGATGACTTGGTGTTTATCTTAAACTA AGCCCATGGCACAGTGTGTT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MPTSIFAQYSLSLRKTAAVLLVAMILMLLDSKNPDWFTPIRDTSHSAMQPIYQMSVLPSFVSHWADGTLMSKEALRRENV QLHAQLLHAQAKLQQQDYVLAQNARLQGILSTTKPDQYDLNLAQVIGTDTNPLKQIVVLNKGSNDGVEVGQTAIDENGIL GQIINVYPNTSRLLLITDELQSVSVTVRRTGQRAIVSGEGTPSSLKLDYIFKTSDIRVGDELISSGLGGRFPAGYRVGRI EYINPEQNDNFMNIEVTPAADFVNSSYVLIMQDSKHSPRYSDDSFTGSLELTQAPYVPPSRPIDEP
Sequences:
>Translated_306_residues MPTSIFAQYSLSLRKTAAVLLVAMILMLLDSKNPDWFTPIRDTSHSAMQPIYQMSVLPSFVSHWADGTLMSKEALRRENV QLHAQLLHAQAKLQQQDYVLAQNARLQGILSTTKPDQYDLNLAQVIGTDTNPLKQIVVLNKGSNDGVEVGQTAIDENGIL GQIINVYPNTSRLLLITDELQSVSVTVRRTGQRAIVSGEGTPSSLKLDYIFKTSDIRVGDELISSGLGGRFPAGYRVGRI EYINPEQNDNFMNIEVTPAADFVNSSYVLIMQDSKHSPRYSDDSFTGSLELTQAPYVPPSRPIDEP >Mature_305_residues PTSIFAQYSLSLRKTAAVLLVAMILMLLDSKNPDWFTPIRDTSHSAMQPIYQMSVLPSFVSHWADGTLMSKEALRRENVQ LHAQLLHAQAKLQQQDYVLAQNARLQGILSTTKPDQYDLNLAQVIGTDTNPLKQIVVLNKGSNDGVEVGQTAIDENGILG QIINVYPNTSRLLLITDELQSVSVTVRRTGQRAIVSGEGTPSSLKLDYIFKTSDIRVGDELISSGLGGRFPAGYRVGRIE YINPEQNDNFMNIEVTPAADFVNSSYVLIMQDSKHSPRYSDDSFTGSLELTQAPYVPPSRPIDEP
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=251, Percent_Identity=35.0597609561753, Blast_Score=117, Evalue=9e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 33840; Mature: 33709
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSIFAQYSLSLRKTAAVLLVAMILMLLDSKNPDWFTPIRDTSHSAMQPIYQMSVLPSF CCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHH VSHWADGTLMSKEALRRENVQLHAQLLHAQAKLQQQDYVLAQNARLQGILSTTKPDQYDL HHHHCCCCEECHHHHHHCCHHHHHHHHHHHHHHHHHCEEEECCCEEEEEEECCCCCCCCC NLAQVIGTDTNPLKQIVVLNKGSNDGVEVGQTAIDENGILGQIINVYPNTSRLLLITDEL CHHHEECCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCEEEEEEECCCCCEEEEEECCC QSVSVTVRRTGQRAIVSGEGTPSSLKLDYIFKTSDIRVGDELISSGLGGRFPAGYRVGRI CEEEEEEEECCCEEEEECCCCCCCEEEEEEEECCCCEECHHHHHCCCCCCCCCCEEECEE EYINPEQNDNFMNIEVTPAADFVNSSYVLIMQDSKHSPRYSDDSFTGSLELTQAPYVPPS EEECCCCCCCEEEEEEECHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC RPIDEP CCCCCC >Mature Secondary Structure PTSIFAQYSLSLRKTAAVLLVAMILMLLDSKNPDWFTPIRDTSHSAMQPIYQMSVLPSF CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHH VSHWADGTLMSKEALRRENVQLHAQLLHAQAKLQQQDYVLAQNARLQGILSTTKPDQYDL HHHHCCCCEECHHHHHHCCHHHHHHHHHHHHHHHHHCEEEECCCEEEEEEECCCCCCCCC NLAQVIGTDTNPLKQIVVLNKGSNDGVEVGQTAIDENGILGQIINVYPNTSRLLLITDEL CHHHEECCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCEEEEEEECCCCCEEEEEECCC QSVSVTVRRTGQRAIVSGEGTPSSLKLDYIFKTSDIRVGDELISSGLGGRFPAGYRVGRI CEEEEEEEECCCEEEEECCCCCCCEEEEEEEECCCCEECHHHHHCCCCCCCCCCEEECEE EYINPEQNDNFMNIEVTPAADFVNSSYVLIMQDSKHSPRYSDDSFTGSLELTQAPYVPPS EEECCCCCCCEEEEEEECHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC RPIDEP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]