| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652225
Identifier: 148652225
GI number: 148652225
Start: 506319
End: 506969
Strand: Direct
Name: 148652225
Synonym: PsycPRwf_0413
Alternate gene names: NA
Gene position: 506319-506969 (Clockwise)
Preceding gene: 148652224
Following gene: 148652227
Centisome position: 17.0
GC content: 44.09
Gene sequence:
>651_bases ATGAAAAAGCCAATGCTGAGTGCCCTAACTGCCTGCCTAATTTTAATCGCAGGCTGTAATGCAGAGTCGGAAAAGGCGGA ACCTAAAGCGGCTGTACCTAATACAGAAGATGTGGCCCCTATTGGTCATACTCAGACCCCGAATCATGGCCAAGCTGCCA AGTTGATTAAAAAGCCAAACTTTGATATTAAAGCTGAAGATTATGGCAATAAGCTAAATGAGTTACTTGCCAATACTGAA TTTGCGGCTATGACCGTGACCAAGGTTGCAGAAGGAGACTCAGGTGATGCCTTTATAATAGATTATCCGCATCACATAAG CCTTACCGGCGAGGTGAATGAGTCTGGAGTGCTAGAAGCGTTAATTTACACCATGCCCTCCAATGAGCAGTTAGAAAAAT CGGGGGCTAAATTATCGCAGTTAGTGACGGCTTCCTTGTTGGCGTTAAATCCCGAGCTGTCACCATCAGAAGCTAAGGCC AAAGTGGCAGAGTTATTAGATCACGCTTTCTCTAATTATATTTTGCAAAAGACCCACCAACGGGCCATAGGAGTCGTTGG AGAAGGAGTATATGTTTGTGAAATCTCTGAGATGGGCGTAAGGCTATTGATTGAGCCAGCTGAAGGCAGTCGTTTTATAA GTAAGAAATAA
Upstream 100 bases:
>100_bases TAGATCATTATGATTTATGGGCTTTTTTAAACCAATAAATTTGGTTTATAACGTTAAAATAGCTATTTAAATAGATGAAA TATGATAATTAGGATAAGTC
Downstream 100 bases:
>100_bases AGATAAGCAAAAAGAGTTAGATAATAAAAAGTGGGTAGCATTTTTATAATGCCACCCACTTTTTTTGGCTATTATTTTAT TAATATCAGTTAAACACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKKPMLSALTACLILIAGCNAESEKAEPKAAVPNTEDVAPIGHTQTPNHGQAAKLIKKPNFDIKAEDYGNKLNELLANTE FAAMTVTKVAEGDSGDAFIIDYPHHISLTGEVNESGVLEALIYTMPSNEQLEKSGAKLSQLVTASLLALNPELSPSEAKA KVAELLDHAFSNYILQKTHQRAIGVVGEGVYVCEISEMGVRLLIEPAEGSRFISKK
Sequences:
>Translated_216_residues MKKPMLSALTACLILIAGCNAESEKAEPKAAVPNTEDVAPIGHTQTPNHGQAAKLIKKPNFDIKAEDYGNKLNELLANTE FAAMTVTKVAEGDSGDAFIIDYPHHISLTGEVNESGVLEALIYTMPSNEQLEKSGAKLSQLVTASLLALNPELSPSEAKA KVAELLDHAFSNYILQKTHQRAIGVVGEGVYVCEISEMGVRLLIEPAEGSRFISKK >Mature_216_residues MKKPMLSALTACLILIAGCNAESEKAEPKAAVPNTEDVAPIGHTQTPNHGQAAKLIKKPNFDIKAEDYGNKLNELLANTE FAAMTVTKVAEGDSGDAFIIDYPHHISLTGEVNESGVLEALIYTMPSNEQLEKSGAKLSQLVTASLLALNPELSPSEAKA KVAELLDHAFSNYILQKTHQRAIGVVGEGVYVCEISEMGVRLLIEPAEGSRFISKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23156; Mature: 23156
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPMLSALTACLILIAGCNAESEKAEPKAAVPNTEDVAPIGHTQTPNHGQAAKLIKKPN CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC FDIKAEDYGNKLNELLANTEFAAMTVTKVAEGDSGDAFIIDYPHHISLTGEVNESGVLEA CCEECHHHHHHHHHHHHCCCHHHEEEEHHCCCCCCCEEEEECCCEEEEECCCCCCHHEEH LIYTMPSNEQLEKSGAKLSQLVTASLLALNPELSPSEAKAKVAELLDHAFSNYILQKTHQ HEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RAIGVVGEGVYVCEISEMGVRLLIEPAEGSRFISKK HHHHEECCCEEEEEECCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MKKPMLSALTACLILIAGCNAESEKAEPKAAVPNTEDVAPIGHTQTPNHGQAAKLIKKPN CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC FDIKAEDYGNKLNELLANTEFAAMTVTKVAEGDSGDAFIIDYPHHISLTGEVNESGVLEA CCEECHHHHHHHHHHHHCCCHHHEEEEHHCCCCCCCEEEEECCCEEEEECCCCCCHHEEH LIYTMPSNEQLEKSGAKLSQLVTASLLALNPELSPSEAKAKVAELLDHAFSNYILQKTHQ HEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RAIGVVGEGVYVCEISEMGVRLLIEPAEGSRFISKK HHHHEECCCEEEEEECCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA