| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652227
Identifier: 148652227
GI number: 148652227
Start: 508355
End: 510613
Strand: Direct
Name: 148652227
Synonym: PsycPRwf_0415
Alternate gene names: NA
Gene position: 508355-510613 (Clockwise)
Preceding gene: 148652225
Following gene: 148652228
Centisome position: 17.06
GC content: 39.84
Gene sequence:
>2259_bases ATGTCCCTAGTGAATTTATCGAAACTTAGTTTTGTAGTTGTATTGGGATTAGGTGTTGTTGCATGCAGTAGTGGTGGTTC AAGCTCATCATTTGGGGGTAGCTCTCCAATCATAACTCCGGAACAACAGGCGCAAAAAATCGAAGCTAATCGTGTGGCTT TAGTAGCAAAAGCTAAAAAAGCAGGTCTAACAGAGGTTCAAGCGAATGCTTATGCAGAAGCTAACAAAGAGGCCAGTGTC AACGATGCTGAAAGTGCTTTAAATAAAATTCTAGCGGATATTGAGGCAGAGCGTTTAGAGAAAATCGAAGCGAATCGTGT AGCCTTAGTAGCAAAAGCTAAAAAAGCAGGTCTAACAGAGGCTCAAGCGAATGCTTATGCTCAAGCTAACAAAGAAGTCA GTACCAAAGATGCTGAAAGTGCTTTGAATAAAATTCTAGCGGATATTGAGGCAGAGCGTTTAGAGAAAATCGAAGCGAAT CGTGTAGCATTAGTAGCTAAAGCGAAAAAAGCAGGTCTAACAGAGGCTCAAGCAAATGCTTATGCTCAAACTAACAAAGA AGTCAGTACCAAAGATGCTGAAAGTGCTTTGAATAAAATTCTAGCGGATATTGAGGCAGAGCGTTTAGAGAAAATCGAAG CGAATCGTGTAGCATTAGTAGCTAAAGCGAAAAAAGCAGGTCTAACAGAGGCTCAAGCGAACGCTTATGCTCAAGCTAAC AAAGAAGTCAGTACCAAAGATGCCGAAAGCGCTCTAAGCAAAATTTTAGCTGATATTGCAGAAGCACAGCGTTTAGAGAA GATTGAAGCGAATCGTGTAGCGTTAGTAGCAAAAGCGAAAAAAGCAGGCTTAACAGAGGCTCAAGCGAACGCTTATGCTC AAGCTAACAAAGAAGGCAATACCAAAGATGCTGAAAGCGCTCTAAACAAAATTTTAGCTGATATTGCAGAAGCACAGCGT TTAGAGAAGATTGAAGCAAATCGTGTAGCGTTAGTAGCAAAAGCGAAAAAAGCAGGTTTAACAGAGGCTCAAGCAAATGC TTATGCTCAAGCTAACAAAGAAGCCAATACCAAAGATGCTGAAAGTGCTTTAAATAAAATCCTAGCTGATATTACAGAAG CACAGCGTTTAGAGAAGATTGAAGCAAATCGTGTAGCGTTAGTAGCAAAAGCGAAAAAAGCAGGTTTAACAGAGGCTCAA GCAAATGCTTATGCTCAAGCTAACAAAGAAGCCAATACCAAAGATGCTGAAAGTGCTTTAAATAAAATTTTAGCCGATAT TGAGGCAGAGCGTTTAGAGAAGATCGAAGCGAATCGTGTAGCGTTAATAGCAAAAGCGAAAAAAGCAGGCTTAACAGATG CTCAAGCGAACGCCTATGCTCAAGCTAATAAAGAAGCGAGTACTAAAGATGCTGATAGTGCTTTAAACAAAATTTTGGCT GATATTGCAGAAACAAAGCGTCTAGAGAAAATCGAAGCTAACCGTGTAGCGTTAGTAGCAAAAGCTAAAAAAGCAGGTTT AACGGATGCTCAAGCAGAGTCCTATGCAGAAGCTAACAAAGAAGCCAGTGCCAAAGATGCTGATACTGCTTTAAACAATA TTTTGGCTGAGATTAAAGAGCATGAAAGACTTGCTTTAGAAGCTGCAGTTTCTTTAGAAAAAGGCCATTATGATAATCCA GCACGCTATCCTGAATATTTAGTTACGGCACATCAGTTATCTTATAGTGATAGCACACTGAATAATGATAGAACAATCAA TATTGAGCATGAAGTAGTTTACAATCAGCCTTATTCTGTTGTTATTGGGAGCTACTCTAGCTGGACGAAAGGAATAGGTT CGTATATTTTTAGCTCAGGCATGGATTCAAGCTTTACAACTAAGGGCTTAAAAACAAAAGCAGATGCTATTCCGAGCTTA GGAAAGGCGAATTACTCTGGACTTGCATTTAGTAGTGAAGAAAATCCTATTTTTGCTTCAACTTCGGGTTACTATAAAGA AGGGCTATTATCATATGATGTAGACTTTGGAAGTCGCAAAGGCTCTGGAACAATTACCGGGTTAGGGGATGTGGTTGAGC TACATGAAGGGACTATCTCCGGTTCTGGTATATCTTCATTGGCCACTCAGTCATATAAAACTGGAGATTATTCGTTAGGG TTCTATGGTAAAAAAGCTGAAGAAATCGTTGGTACCATTGCGTTTGAAGGTAAAGATACTATTGGTTTTGGTGGTACGCG TGGCGAAATCACTAAATAG
Upstream 100 bases:
>100_bases ATAACAGTATTGTAATATTATAGAAACAAGCTGAAATAAAAAAATTATTAAGCCTGTTTAAGTAAAAATAATGGTTATTT TAATTATTACGGAGAGAAAA
Downstream 100 bases:
>100_bases GCCTTAGCTATAATCTAACTATTTTAAAAGCCGTTTGAGAATATGCTATGTATTTCAAACGGCTTTTTTGTCATATCGGT ATCTCTATGAATAAAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 752; Mature: 751
Protein sequence:
>752_residues MSLVNLSKLSFVVVLGLGVVACSSGGSSSSFGGSSPIITPEQQAQKIEANRVALVAKAKKAGLTEVQANAYAEANKEASV NDAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEVSTKDAESALNKILADIEAERLEKIEAN RVALVAKAKKAGLTEAQANAYAQTNKEVSTKDAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTEAQANAYAQAN KEVSTKDAESALSKILADIAEAQRLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEGNTKDAESALNKILADIAEAQR LEKIEANRVALVAKAKKAGLTEAQANAYAQANKEANTKDAESALNKILADITEAQRLEKIEANRVALVAKAKKAGLTEAQ ANAYAQANKEANTKDAESALNKILADIEAERLEKIEANRVALIAKAKKAGLTDAQANAYAQANKEASTKDADSALNKILA DIAETKRLEKIEANRVALVAKAKKAGLTDAQAESYAEANKEASAKDADTALNNILAEIKEHERLALEAAVSLEKGHYDNP ARYPEYLVTAHQLSYSDSTLNNDRTINIEHEVVYNQPYSVVIGSYSSWTKGIGSYIFSSGMDSSFTTKGLKTKADAIPSL GKANYSGLAFSSEENPIFASTSGYYKEGLLSYDVDFGSRKGSGTITGLGDVVELHEGTISGSGISSLATQSYKTGDYSLG FYGKKAEEIVGTIAFEGKDTIGFGGTRGEITK
Sequences:
>Translated_752_residues MSLVNLSKLSFVVVLGLGVVACSSGGSSSSFGGSSPIITPEQQAQKIEANRVALVAKAKKAGLTEVQANAYAEANKEASV NDAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEVSTKDAESALNKILADIEAERLEKIEAN RVALVAKAKKAGLTEAQANAYAQTNKEVSTKDAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTEAQANAYAQAN KEVSTKDAESALSKILADIAEAQRLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEGNTKDAESALNKILADIAEAQR LEKIEANRVALVAKAKKAGLTEAQANAYAQANKEANTKDAESALNKILADITEAQRLEKIEANRVALVAKAKKAGLTEAQ ANAYAQANKEANTKDAESALNKILADIEAERLEKIEANRVALIAKAKKAGLTDAQANAYAQANKEASTKDADSALNKILA DIAETKRLEKIEANRVALVAKAKKAGLTDAQAESYAEANKEASAKDADTALNNILAEIKEHERLALEAAVSLEKGHYDNP ARYPEYLVTAHQLSYSDSTLNNDRTINIEHEVVYNQPYSVVIGSYSSWTKGIGSYIFSSGMDSSFTTKGLKTKADAIPSL GKANYSGLAFSSEENPIFASTSGYYKEGLLSYDVDFGSRKGSGTITGLGDVVELHEGTISGSGISSLATQSYKTGDYSLG FYGKKAEEIVGTIAFEGKDTIGFGGTRGEITK >Mature_751_residues SLVNLSKLSFVVVLGLGVVACSSGGSSSSFGGSSPIITPEQQAQKIEANRVALVAKAKKAGLTEVQANAYAEANKEASVN DAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEVSTKDAESALNKILADIEAERLEKIEANR VALVAKAKKAGLTEAQANAYAQTNKEVSTKDAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTEAQANAYAQANK EVSTKDAESALSKILADIAEAQRLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEGNTKDAESALNKILADIAEAQRL EKIEANRVALVAKAKKAGLTEAQANAYAQANKEANTKDAESALNKILADITEAQRLEKIEANRVALVAKAKKAGLTEAQA NAYAQANKEANTKDAESALNKILADIEAERLEKIEANRVALIAKAKKAGLTDAQANAYAQANKEASTKDADSALNKILAD IAETKRLEKIEANRVALVAKAKKAGLTDAQAESYAEANKEASAKDADTALNNILAEIKEHERLALEAAVSLEKGHYDNPA RYPEYLVTAHQLSYSDSTLNNDRTINIEHEVVYNQPYSVVIGSYSSWTKGIGSYIFSSGMDSSFTTKGLKTKADAIPSLG KANYSGLAFSSEENPIFASTSGYYKEGLLSYDVDFGSRKGSGTITGLGDVVELHEGTISGSGISSLATQSYKTGDYSLGF YGKKAEEIVGTIAFEGKDTIGFGGTRGEITK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79568; Mature: 79436
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVNLSKLSFVVVLGLGVVACSSGGSSSSFGGSSPIITPEQQAQKIEANRVALVAKAKK CCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHH AGLTEVQANAYAEANKEASVNDAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTE CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCH AQANAYAQANKEVSTKDAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTEAQANA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHH YAQTNKEVSTKDAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTEAQANAYAQAN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCC KEVSTKDAESALSKILADIAEAQRLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEGN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCCCCCC TKDAESALNKILADIAEAQRLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEANTKDA CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCCCCCCCHHH ESALNKILADITEAQRLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEANTKDAESAL HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH NKILADIEAERLEKIEANRVALIAKAKKAGLTDAQANAYAQANKEASTKDADSALNKILA HHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH DIAETKRLEKIEANRVALVAKAKKAGLTDAQAESYAEANKEASAKDADTALNNILAEIKE HHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH HERLALEAAVSLEKGHYDNPARYPEYLVTAHQLSYSDSTLNNDRTINIEHEVVYNQPYSV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCEE VIGSYSSWTKGIGSYIFSSGMDSSFTTKGLKTKADAIPSLGKANYSGLAFSSEENPIFAS EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCCEEEC TSGYYKEGLLSYDVDFGSRKGSGTITGLGDVVELHEGTISGSGISSLATQSYKTGDYSLG CCCHHHCCCEEEECCCCCCCCCCEEECCHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEC FYGKKAEEIVGTIAFEGKDTIGFGGTRGEITK CCCCHHHHHHEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SLVNLSKLSFVVVLGLGVVACSSGGSSSSFGGSSPIITPEQQAQKIEANRVALVAKAKK CCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHH AGLTEVQANAYAEANKEASVNDAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTE CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCH AQANAYAQANKEVSTKDAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTEAQANA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHH YAQTNKEVSTKDAESALNKILADIEAERLEKIEANRVALVAKAKKAGLTEAQANAYAQAN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCC KEVSTKDAESALSKILADIAEAQRLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEGN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCCCCCC TKDAESALNKILADIAEAQRLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEANTKDA CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCCCCCCCHHH ESALNKILADITEAQRLEKIEANRVALVAKAKKAGLTEAQANAYAQANKEANTKDAESAL HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH NKILADIEAERLEKIEANRVALIAKAKKAGLTDAQANAYAQANKEASTKDADSALNKILA HHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH DIAETKRLEKIEANRVALVAKAKKAGLTDAQAESYAEANKEASAKDADTALNNILAEIKE HHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH HERLALEAAVSLEKGHYDNPARYPEYLVTAHQLSYSDSTLNNDRTINIEHEVVYNQPYSV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCEE VIGSYSSWTKGIGSYIFSSGMDSSFTTKGLKTKADAIPSLGKANYSGLAFSSEENPIFAS EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCCEEEC TSGYYKEGLLSYDVDFGSRKGSGTITGLGDVVELHEGTISGSGISSLATQSYKTGDYSLG CCCHHHCCCEEEECCCCCCCCCCEEECCHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEC FYGKKAEEIVGTIAFEGKDTIGFGGTRGEITK CCCCHHHHHHEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA