| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is suhB [H]
Identifier: 148652224
GI number: 148652224
Start: 505361
End: 506191
Strand: Direct
Name: suhB [H]
Synonym: PsycPRwf_0412
Alternate gene names: 148652224
Gene position: 505361-506191 (Clockwise)
Preceding gene: 148652223
Following gene: 148652225
Centisome position: 16.96
GC content: 47.77
Gene sequence:
>831_bases ATGGAACCAATGGTCGTAATAGCAGCCCGCGCTGCTGAAAAAGTCGGTGCTGAGCTATTAAAAGCGCATCAAAACCGCCA CAAAATTGAATTCGATACCGAGTCTAAAGGCCTTGAAGGTCTTGTCACTAAGATTGACCGATTTAGTGAAGAATTGACTA TCGAAACTTTAAAATACAACTATCCCAATCATTCGTTTTTGGGAGAAGAGTTTGGTTTACAAGAGGGCCAAGGTAGCGAC TCTGAATGGTGCTGGATTATCGACCCACTAGATGGTACGCACAATTTCGTACATGGCGTTCCTCATTTTTGTATTTCTAT CGCAGTGCAGCATAACGGCGTTACTGAACATGGCGTTATCTATGATCCTATCCGTGATGAGATGTTCTCAGCCAGCCGTG GTAAAGGTGCTCGTCTAAATCAGCGCCGTCTGCAAGTCAGCCAGCGCAAAACCATCGAAGGCGGCTTATTCACGACAGGC CACCCGCTTGAGCGTCAACGCGGTGATCAAGTGGTCTCTTATGCCAAAGAGCATTTTGCTACGTTACAAAAAATCGCTGA AGAAGGGGGGCAAGTCCGCCGTCTGGGCTCAGCAGCGCTAGATTTGGCTTATGTAGCCGCCGGCCGCTTTGATGGTTACT TTGAAATGAAGTTAAAGCCTTGGGATATCGCTGCCGGTGAACTGTTGGTCAACGAAGCGCGCGGCGTGGTAGTGGATCAT AATGGCGCTCACAAAGCGATGGAAACGGGTTCTATTTTTGCCTGTAACGTTAAACTGTTAAAGCCATTAATGAAGATGGT TGTGCCGACTTGGGGCGATGCGGTTCGTTAA
Upstream 100 bases:
>100_bases CGCTTGGCCCCGCTGTTTTTTCTCCTTCTTAAATCAACACCACTCAACTGAGTATTTCAGCTGAGTTTTTAACCGCTTTA GTCGAGCAAATAGGAAAATT
Downstream 100 bases:
>100_bases GACAAGATTTAGTCTGATTAAAGCCCATAGATCATTATGATTTATGGGCTTTTTTAAACCAATAAATTTGGTTTATAACG TTAAAATAGCTATTTAAATA
Product: inositol-phosphate phosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MEPMVVIAARAAEKVGAELLKAHQNRHKIEFDTESKGLEGLVTKIDRFSEELTIETLKYNYPNHSFLGEEFGLQEGQGSD SEWCWIIDPLDGTHNFVHGVPHFCISIAVQHNGVTEHGVIYDPIRDEMFSASRGKGARLNQRRLQVSQRKTIEGGLFTTG HPLERQRGDQVVSYAKEHFATLQKIAEEGGQVRRLGSAALDLAYVAAGRFDGYFEMKLKPWDIAAGELLVNEARGVVVDH NGAHKAMETGSIFACNVKLLKPLMKMVVPTWGDAVR
Sequences:
>Translated_276_residues MEPMVVIAARAAEKVGAELLKAHQNRHKIEFDTESKGLEGLVTKIDRFSEELTIETLKYNYPNHSFLGEEFGLQEGQGSD SEWCWIIDPLDGTHNFVHGVPHFCISIAVQHNGVTEHGVIYDPIRDEMFSASRGKGARLNQRRLQVSQRKTIEGGLFTTG HPLERQRGDQVVSYAKEHFATLQKIAEEGGQVRRLGSAALDLAYVAAGRFDGYFEMKLKPWDIAAGELLVNEARGVVVDH NGAHKAMETGSIFACNVKLLKPLMKMVVPTWGDAVR >Mature_276_residues MEPMVVIAARAAEKVGAELLKAHQNRHKIEFDTESKGLEGLVTKIDRFSEELTIETLKYNYPNHSFLGEEFGLQEGQGSD SEWCWIIDPLDGTHNFVHGVPHFCISIAVQHNGVTEHGVIYDPIRDEMFSASRGKGARLNQRRLQVSQRKTIEGGLFTTG HPLERQRGDQVVSYAKEHFATLQKIAEEGGQVRRLGSAALDLAYVAAGRFDGYFEMKLKPWDIAAGELLVNEARGVVVDH NGAHKAMETGSIFACNVKLLKPLMKMVVPTWGDAVR
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=257, Percent_Identity=35.408560311284, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI221625487, Length=257, Percent_Identity=35.408560311284, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI7657236, Length=265, Percent_Identity=28.6792452830189, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI221625507, Length=147, Percent_Identity=39.4557823129252, Blast_Score=96, Evalue=2e-20, Organism=Escherichia coli, GI1788882, Length=276, Percent_Identity=43.8405797101449, Blast_Score=239, Evalue=1e-64, Organism=Caenorhabditis elegans, GI193202570, Length=236, Percent_Identity=33.8983050847458, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI193202572, Length=237, Percent_Identity=32.9113924050633, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6320493, Length=232, Percent_Identity=34.051724137931, Blast_Score=132, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6321836, Length=241, Percent_Identity=32.7800829875519, Blast_Score=116, Evalue=4e-27, Organism=Drosophila melanogaster, GI21357329, Length=225, Percent_Identity=39.5555555555556, Blast_Score=158, Evalue=4e-39, Organism=Drosophila melanogaster, GI21357303, Length=247, Percent_Identity=34.0080971659919, Blast_Score=141, Evalue=4e-34, Organism=Drosophila melanogaster, GI24664922, Length=265, Percent_Identity=32.8301886792453, Blast_Score=137, Evalue=7e-33, Organism=Drosophila melanogaster, GI24664926, Length=272, Percent_Identity=31.6176470588235, Blast_Score=128, Evalue=3e-30, Organism=Drosophila melanogaster, GI21357957, Length=230, Percent_Identity=33.4782608695652, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24664918, Length=240, Percent_Identity=32.0833333333333, Blast_Score=104, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 30709; Mature: 30709
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPMVVIAARAAEKVGAELLKAHQNRHKIEFDTESKGLEGLVTKIDRFSEELTIETLKYN CCCEEEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHEEEEEEEC YPNHSFLGEEFGLQEGQGSDSEWCWIIDPLDGTHNFVHGVPHFCISIAVQHNGVTEHGVI CCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHEEEEEECCCCCCCCEE YDPIRDEMFSASRGKGARLNQRRLQVSQRKTIEGGLFTTGHPLERQRGDQVVSYAKEHFA ECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TLQKIAEEGGQVRRLGSAALDLAYVAAGRFDGYFEMKLKPWDIAAGELLVNEARGVVVDH HHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHEECCCCEEEEC NGAHKAMETGSIFACNVKLLKPLMKMVVPTWGDAVR CCCHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEPMVVIAARAAEKVGAELLKAHQNRHKIEFDTESKGLEGLVTKIDRFSEELTIETLKYN CCCEEEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHEEEEEEEC YPNHSFLGEEFGLQEGQGSDSEWCWIIDPLDGTHNFVHGVPHFCISIAVQHNGVTEHGVI CCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHEEEEEECCCCCCCCEE YDPIRDEMFSASRGKGARLNQRRLQVSQRKTIEGGLFTTGHPLERQRGDQVVSYAKEHFA ECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TLQKIAEEGGQVRRLGSAALDLAYVAAGRFDGYFEMKLKPWDIAAGELLVNEARGVVVDH HHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHEECCCCEEEEC NGAHKAMETGSIFACNVKLLKPLMKMVVPTWGDAVR CCCHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]