| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643798
Identifier: 148643798
GI number: 148643798
Start: 1790824
End: 1791294
Strand: Reverse
Name: 148643798
Synonym: Msm_1738
Alternate gene names: NA
Gene position: 1791294-1790824 (Counterclockwise)
Preceding gene: 148643799
Following gene: 148643796
Centisome position: 96.66
GC content: 35.46
Gene sequence:
>471_bases TTGGGGATTGTATTTATATCAGTTATTTGCATAGATACTCATGAAAGCACCGGCTTCAGTGTAAAATCATCAGACACTCT TAAAGACGGTGATGCATACAGTGTAGAGTTATGTGACTCCAAAGGAAATCCGATAGCTAATCAGAACATTTCCATTTCAT TTGGATCAAATTCCTTTAACCTTACAACTGATGAAAATGGAATAGCTGTCCTGAAAACCAGCAATGTTCCTGCAGGAGAG TATGGCATTAAAATCAGGTATGAAATAAACATTCACCATAAAAATACTTCAGCTGCTCATCATACTTTTATCCTGAAAAC CGGAGAAACCCAAAGTTTAGATGAAATTCTTCAAAGAAAAAAATACAGAATTGTTGAATACAATTATATGGGAGACATGG AATCTGCACTGGTTGAAGATTCAAATGGTAAAAAATGGATAATGGGCGGAGACGGGTTTACATCTGTTTAA
Upstream 100 bases:
>100_bases TGTGTTTAATTAGTATTTAAATATTGTTATTAAAAAGTATAAAAATAACAAGCATGAATGAAAAAACCTGGTAAAAATAT TAGCAGCTGCTGCAATTATC
Downstream 100 bases:
>100_bases AAAAAGGAGTTTACCATCCCATTTCTCCAATCATACTGACAACATTTTTACCCTCATCAGTCAGACGATACAGACGACCT TTGTGGGCGTCTTCATTAAT
Product: putative adhesin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MGIVFISVICIDTHESTGFSVKSSDTLKDGDAYSVELCDSKGNPIANQNISISFGSNSFNLTTDENGIAVLKTSNVPAGE YGIKIRYEINIHHKNTSAAHHTFILKTGETQSLDEILQRKKYRIVEYNYMGDMESALVEDSNGKKWIMGGDGFTSV
Sequences:
>Translated_156_residues MGIVFISVICIDTHESTGFSVKSSDTLKDGDAYSVELCDSKGNPIANQNISISFGSNSFNLTTDENGIAVLKTSNVPAGE YGIKIRYEINIHHKNTSAAHHTFILKTGETQSLDEILQRKKYRIVEYNYMGDMESALVEDSNGKKWIMGGDGFTSV >Mature_155_residues GIVFISVICIDTHESTGFSVKSSDTLKDGDAYSVELCDSKGNPIANQNISISFGSNSFNLTTDENGIAVLKTSNVPAGEY GIKIRYEINIHHKNTSAAHHTFILKTGETQSLDEILQRKKYRIVEYNYMGDMESALVEDSNGKKWIMGGDGFTSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17134; Mature: 17003
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIVFISVICIDTHESTGFSVKSSDTLKDGDAYSVELCDSKGNPIANQNISISFGSNSFN CCEEEEEEEEEECCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEE LTTDENGIAVLKTSNVPAGEYGIKIRYEINIHHKNTSAAHHTFILKTGETQSLDEILQRK EEECCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHCC KYRIVEYNYMGDMESALVEDSNGKKWIMGGDGFTSV CEEEEEEECCCCCCHHEEECCCCCEEEEECCCCCCC >Mature Secondary Structure GIVFISVICIDTHESTGFSVKSSDTLKDGDAYSVELCDSKGNPIANQNISISFGSNSFN CEEEEEEEEEECCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEE LTTDENGIAVLKTSNVPAGEYGIKIRYEINIHHKNTSAAHHTFILKTGETQSLDEILQRK EEECCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHCC KYRIVEYNYMGDMESALVEDSNGKKWIMGGDGFTSV CEEEEEEECCCCCCHHEEECCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA