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The map label for this gene is recJ [H]

Identifier: 148643560

GI number: 148643560

Start: 1526530

End: 1527951

Strand: Reverse

Name: recJ [H]

Synonym: Msm_1500

Alternate gene names: 148643560

Gene position: 1527951-1526530 (Counterclockwise)

Preceding gene: 148643561

Following gene: 148643559

Centisome position: 82.45

GC content: 35.58

Gene sequence:

>1422_bases
ATGATGGAAATACCATGCGGAATGCAGGAGCAGTTTCTTGAAGCCAAAGAGTTAATTGAATCCAGCAATGACATTAAAAT
TTATACACACACTGACTGCGACGGAATCTGCTCCGGTGCAATCCTATCTATAATATTGGACCGTTTAAACAAGGATTATG
AAATTGAATTTGTCAATCTTGATGAAATAGAAGACCTAGATTTAGACCATAAACTGACAATTTTTTCAGATTTGGGTTCA
GGTCAGGGAGTTGACAAAAATGCAAAAGACGACCAGAAAATCTTAATTTTAGACCACCACCCGCCATTAAGAGACATCAA
CTATAAAAATGACAAAGCATATACTTATTTAGAAATCAATCCAATGTTCTACGGTATTGACGGATCATATTATGTCTGCG
GTGGAGGATTATGTTATTTTTTAGCTAAAACATTTGGCTTTAAGGATTTAAGCTGGATCGGTGTTCTGTCAGCTATCGGA
GATATGCAAAACAATAAAACAGGACATTTCGAAGGATTAAATGAAATTATCCAGGAAGATGCAATTAATGAAGGTCTTCT
AAAAGTGACTAAAAATGATTTGAACATCTACGGACGCAGTACCAGACCGCTATATGTTGCACTATCCTATTTCAGTGATG
TCAAGTTACCGATAACTAACAATCAGCAGGAAGCTAAAGTTGTTTTGGAAGAATTGGGAGTTGATGAAAAACACAACAGA
AAAACATTATCTGAGGTAACTGAAGAGGATAAAATGGAAATCAAAAAATTTTTAAGCAGAATGATTTCCAAAAGAGTTCC
TCCAAAATACCTCAAATATGTTCCAAAATTGATTGTGGGAGATGCATACACTTTTTTAAATGAAGAGGAAGGAAGCTTTT
TAAGAGACGGTTCTGAGTTTTCAACAGCTATGAATGCCTGCGGCAGAAACCGAAAAGAAGCTATTGGAGTAGATATTATT
AAAGGAGACCGACTTGTTGCTCTTGATGCCTTAGAAGAAGTCAGCAAAACACACAAGTATAATCTGGCCACTTCCATCAG
CAAAGTTGCAGACAATTATCATTCCGAAATTATTGAACTTGACAATTTTCAATATTTTGACTGCAGTGACTTTGATGAAG
ACATAGCTTCCAATATCATCGGTACAATAACAGGTAGGGTTTTAGGTTACTGTAATTGGAAAAAACCTATTTTAGGATTT
AGCAAACCTAAAAATAACCAAATCAAAGTCTCACTTAGATGCTCCAAACTCCTTGCCTATGACGGAATTCATTTCGGTAA
CATGATGCGTGAAATCGCAAAAGAAGTTGGAGGTACCGGAGGAGGCCATGCAATAGCTTGCGGTGCTTACATTCCAAATG
AAAAAAAATCAGAATTCCTTGATAAATTTAATAGAAAATTACAAGGAAAAATAGCAAATTAA

Upstream 100 bases:

>100_bases
GCAAATGGTATGAAAAATCAGGACGTATCTTAGTTGAAAGTGACAAACCTAAATTAGAGCTTTTAAAGGAAATTAGTTTA
AAACTACAGGAAATAAAACA

Downstream 100 bases:

>100_bases
ATATAACATTAAATCAAAATTAATTATCATTGAAAAAAATTGAGGAATGAAAAAAAATGAAAGCATTTAAAAAAAGAGGT
GCCTTAACACATTTTCAAAT

Product: ssDNA exonuclease, RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MMEIPCGMQEQFLEAKELIESSNDIKIYTHTDCDGICSGAILSIILDRLNKDYEIEFVNLDEIEDLDLDHKLTIFSDLGS
GQGVDKNAKDDQKILILDHHPPLRDINYKNDKAYTYLEINPMFYGIDGSYYVCGGGLCYFLAKTFGFKDLSWIGVLSAIG
DMQNNKTGHFEGLNEIIQEDAINEGLLKVTKNDLNIYGRSTRPLYVALSYFSDVKLPITNNQQEAKVVLEELGVDEKHNR
KTLSEVTEEDKMEIKKFLSRMISKRVPPKYLKYVPKLIVGDAYTFLNEEEGSFLRDGSEFSTAMNACGRNRKEAIGVDII
KGDRLVALDALEEVSKTHKYNLATSISKVADNYHSEIIELDNFQYFDCSDFDEDIASNIIGTITGRVLGYCNWKKPILGF
SKPKNNQIKVSLRCSKLLAYDGIHFGNMMREIAKEVGGTGGGHAIACGAYIPNEKKSEFLDKFNRKLQGKIAN

Sequences:

>Translated_473_residues
MMEIPCGMQEQFLEAKELIESSNDIKIYTHTDCDGICSGAILSIILDRLNKDYEIEFVNLDEIEDLDLDHKLTIFSDLGS
GQGVDKNAKDDQKILILDHHPPLRDINYKNDKAYTYLEINPMFYGIDGSYYVCGGGLCYFLAKTFGFKDLSWIGVLSAIG
DMQNNKTGHFEGLNEIIQEDAINEGLLKVTKNDLNIYGRSTRPLYVALSYFSDVKLPITNNQQEAKVVLEELGVDEKHNR
KTLSEVTEEDKMEIKKFLSRMISKRVPPKYLKYVPKLIVGDAYTFLNEEEGSFLRDGSEFSTAMNACGRNRKEAIGVDII
KGDRLVALDALEEVSKTHKYNLATSISKVADNYHSEIIELDNFQYFDCSDFDEDIASNIIGTITGRVLGYCNWKKPILGF
SKPKNNQIKVSLRCSKLLAYDGIHFGNMMREIAKEVGGTGGGHAIACGAYIPNEKKSEFLDKFNRKLQGKIAN
>Mature_473_residues
MMEIPCGMQEQFLEAKELIESSNDIKIYTHTDCDGICSGAILSIILDRLNKDYEIEFVNLDEIEDLDLDHKLTIFSDLGS
GQGVDKNAKDDQKILILDHHPPLRDINYKNDKAYTYLEINPMFYGIDGSYYVCGGGLCYFLAKTFGFKDLSWIGVLSAIG
DMQNNKTGHFEGLNEIIQEDAINEGLLKVTKNDLNIYGRSTRPLYVALSYFSDVKLPITNNQQEAKVVLEELGVDEKHNR
KTLSEVTEEDKMEIKKFLSRMISKRVPPKYLKYVPKLIVGDAYTFLNEEEGSFLRDGSEFSTAMNACGRNRKEAIGVDII
KGDRLVALDALEEVSKTHKYNLATSISKVADNYHSEIIELDNFQYFDCSDFDEDIASNIIGTITGRVLGYCNWKKPILGF
SKPKNNQIKVSLRCSKLLAYDGIHFGNMMREIAKEVGGTGGGHAIACGAYIPNEKKSEFLDKFNRKLQGKIAN

Specific function: Single-stranded-DNA-specific exonuclease [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 53278; Mature: 53278

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEIPCGMQEQFLEAKELIESSNDIKIYTHTDCDGICSGAILSIILDRLNKDYEIEFVNL
CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEC
DEIEDLDLDHKLTIFSDLGSGQGVDKNAKDDQKILILDHHPPLRDINYKNDKAYTYLEIN
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC
PMFYGIDGSYYVCGGGLCYFLAKTFGFKDLSWIGVLSAIGDMQNNKTGHFEGLNEIIQED
CEEEECCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AINEGLLKVTKNDLNIYGRSTRPLYVALSYFSDVKLPITNNQQEAKVVLEELGVDEKHNR
CCCCCHHEEECCCCEEEECCCCCEEEEEEHHCCEEEECCCCHHHHHHHHHHCCCCCCCCH
KTLSEVTEEDKMEIKKFLSRMISKRVPPKYLKYVPKLIVGDAYTFLNEEEGSFLRDGSEF
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCCHHCCCHHH
STAMNACGRNRKEAIGVDIIKGDRLVALDALEEVSKTHKYNLATSISKVADNYHSEIIEL
HHHHHHHCCCCCHHCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
DNFQYFDCSDFDEDIASNIIGTITGRVLGYCNWKKPILGFSKPKNNQIKVSLRCSKLLAY
CCEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHH
DGIHFGNMMREIAKEVGGTGGGHAIACGAYIPNEKKSEFLDKFNRKLQGKIAN
CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMEIPCGMQEQFLEAKELIESSNDIKIYTHTDCDGICSGAILSIILDRLNKDYEIEFVNL
CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEC
DEIEDLDLDHKLTIFSDLGSGQGVDKNAKDDQKILILDHHPPLRDINYKNDKAYTYLEIN
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC
PMFYGIDGSYYVCGGGLCYFLAKTFGFKDLSWIGVLSAIGDMQNNKTGHFEGLNEIIQED
CEEEECCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AINEGLLKVTKNDLNIYGRSTRPLYVALSYFSDVKLPITNNQQEAKVVLEELGVDEKHNR
CCCCCHHEEECCCCEEEECCCCCEEEEEEHHCCEEEECCCCHHHHHHHHHHCCCCCCCCH
KTLSEVTEEDKMEIKKFLSRMISKRVPPKYLKYVPKLIVGDAYTFLNEEEGSFLRDGSEF
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCCHHCCCHHH
STAMNACGRNRKEAIGVDIIKGDRLVALDALEEVSKTHKYNLATSISKVADNYHSEIIEL
HHHHHHHCCCCCHHCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
DNFQYFDCSDFDEDIASNIIGTITGRVLGYCNWKKPILGFSKPKNNQIKVSLRCSKLLAY
CCEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHH
DGIHFGNMMREIAKEVGGTGGGHAIACGAYIPNEKKSEFLDKFNRKLQGKIAN
CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 10633092 [H]