Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148643547

Identifier: 148643547

GI number: 148643547

Start: 1511086

End: 1511589

Strand: Reverse

Name: 148643547

Synonym: Msm_1487

Alternate gene names: NA

Gene position: 1511589-1511086 (Counterclockwise)

Preceding gene: 148643548

Following gene: 148643541

Centisome position: 81.57

GC content: 31.35

Gene sequence:

>504_bases
ATGAGTGATACTATGAATAAAAAATATTTAATTATAATTTTATTAATACCTTTAATCATGTCTGCTGTATACGGACATGG
AGTTGATGTAACTGCTGATACAATGGTTATCGCAGATGAAACAAACGGACAGTTAGCTAAAGACATAGCTGATTCAAACG
GAATGAATATCAGTGTTTATAAATTTACTTCACAGGCTGATGTGGAACATATTTTAGAACACAGTGTAAACAACACAAAC
AAACGCATACTAATGATAGCTTATCAGGACAGCGGAAATGAATTTTTAAAGAAACATTCAGAAGTATCTGATAGGGTTAT
TGTAGTTGACGACGTTAACAATGATACAATAGAAGACGGATTAAATAAAATAATGAATGCACCAACACAAAATGAAGAGT
CTCAAAGTTCATTTGCTGTGCCGTTATTCATTGGATTAATAATAGGTATTCTTATTGGTGCACCAATTGGAGTGCTTTTA
ATGAAAAGAAAAAATAAGGAATAA

Upstream 100 bases:

>100_bases
TTGCTCCCATTTTATTTATTTATATCAATAATTGAAGGAGCTGCAAATGTGGTTATTATAAGTGCAATTAAAACTATGAA
ACCTGAAATAATGGAGATTA

Downstream 100 bases:

>100_bases
AAATTCCTTTAACTCCTTTTTTTAAAAAATAAAGTATAACTTAAAAAAGTCAATATATAAAAAGCTAATTTTCTAATTTT
AATAAAAAAAGTAAATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSDTMNKKYLIIILLIPLIMSAVYGHGVDVTADTMVIADETNGQLAKDIADSNGMNISVYKFTSQADVEHILEHSVNNTN
KRILMIAYQDSGNEFLKKHSEVSDRVIVVDDVNNDTIEDGLNKIMNAPTQNEESQSSFAVPLFIGLIIGILIGAPIGVLL
MKRKNKE

Sequences:

>Translated_167_residues
MSDTMNKKYLIIILLIPLIMSAVYGHGVDVTADTMVIADETNGQLAKDIADSNGMNISVYKFTSQADVEHILEHSVNNTN
KRILMIAYQDSGNEFLKKHSEVSDRVIVVDDVNNDTIEDGLNKIMNAPTQNEESQSSFAVPLFIGLIIGILIGAPIGVLL
MKRKNKE
>Mature_166_residues
SDTMNKKYLIIILLIPLIMSAVYGHGVDVTADTMVIADETNGQLAKDIADSNGMNISVYKFTSQADVEHILEHSVNNTNK
RILMIAYQDSGNEFLKKHSEVSDRVIVVDDVNNDTIEDGLNKIMNAPTQNEESQSSFAVPLFIGLIIGILIGAPIGVLLM
KRKNKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18391; Mature: 18260

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTMNKKYLIIILLIPLIMSAVYGHGVDVTADTMVIADETNGQLAKDIADSNGMNISVY
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEE
KFTSQADVEHILEHSVNNTNKRILMIAYQDSGNEFLKKHSEVSDRVIVVDDVNNDTIEDG
EECCHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCHHHHH
LNKIMNAPTQNEESQSSFAVPLFIGLIIGILIGAPIGVLLMKRKNKE
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure 
SDTMNKKYLIIILLIPLIMSAVYGHGVDVTADTMVIADETNGQLAKDIADSNGMNISVY
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEE
KFTSQADVEHILEHSVNNTNKRILMIAYQDSGNEFLKKHSEVSDRVIVVDDVNNDTIEDG
EECCHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCHHHHH
LNKIMNAPTQNEESQSSFAVPLFIGLIIGILIGAPIGVLLMKRKNKE
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA