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The map label for this gene is ydjH [C]

Identifier: 148643449

GI number: 148643449

Start: 1409912

End: 1410826

Strand: Reverse

Name: ydjH [C]

Synonym: Msm_1389

Alternate gene names: 148643449

Gene position: 1410826-1409912 (Counterclockwise)

Preceding gene: 148643450

Following gene: 148643448

Centisome position: 76.13

GC content: 35.3

Gene sequence:

>915_bases
ATGGCAAAAAACAGAGATTTACTATCTATCGGACATTCTGCACTTGATTATATCATTAGAGTACCAGAGTTTCCTAAAGC
TAATTTCTCAGCACCAATAAACGATATGAAGACATTTAATGGTGGTGCTGCAGCTAATGTTGCACTTGTTGGAGCAAAAC
TAGGTTTAAAAACATCATTAGTTTCAGCAGTAGGTGGGGACTTTAAAAAATCCAATTATTATGAAATAATGGAAAGTTTA
GATGTAAATACTGATTCATTAATCATAGTTCCTGGAGAAACAAGTCCTACAGCATTTGTTTTAACTGATGAAAATGATGA
CCAGATTAGCTATTTCTACTGGGGAGCTGCTAAAGAATTTGCATCAAGTAAAGTGCCTACACAAGCAATATCCAATGCAG
AGGCTGTTCATTTAGCTACTGGTGATCCTCACTTTAACTGGAAATGTAGTGAAGAAGCAAAAAAACAGGATTTACTTGTT
TCTTTTGACCCTGGTCAGGATCTTGGAATGTACGATACAGACAAATTAAGAGACGTTATTACAAATACTACCATCCTTTT
TGGAAACCATCATGAAATTAGAAGAATACTGGAATCATTAGAAGTGGATTTAGACGGATTAAGGGAAATCGGTCCTAAAA
TTATTGTAAAAACCTGCGGAGCTAATGGGAGTGAAATCTATTCAAACAATGAAAAAATCAAAATTGATGCTATTGTTCGT
GAAGCTGTGGATCCTACTGGAGCAGGAGACTCCTACAGGGCAGGATTTTTATCAAGATTCTTAAACGGAGAATCACTTGA
ACAATCTGCTAAATTTGCATCATCAGTATCCTCTTTTATTGTAGAAGAACAAGGATGTCAAACTAACATGCCTACTTTCG
ATGATGCCTTTGATAGAATGAGTGAATTTTATTAA

Upstream 100 bases:

>100_bases
AAAGTTATTTTTGTTGAAAAATTTATACCAAAGCAACCAAAAATTTTTTAAAAATCATAAAATAAACAATAAATAGACAA
ACAAAAAAGGAGAAAAGAAC

Downstream 100 bases:

>100_bases
TCACTCTTTTTTACTTATTTTTTTTAAAATAAACTTTAGATATATCAATTTTTTTTGAATTAAACTCAATCAGATTAATT
TAAATACTATTACACAAAAA

Product: ribokinase family sugar kinase

Products: ADP; D-ribose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MAKNRDLLSIGHSALDYIIRVPEFPKANFSAPINDMKTFNGGAAANVALVGAKLGLKTSLVSAVGGDFKKSNYYEIMESL
DVNTDSLIIVPGETSPTAFVLTDENDDQISYFYWGAAKEFASSKVPTQAISNAEAVHLATGDPHFNWKCSEEAKKQDLLV
SFDPGQDLGMYDTDKLRDVITNTTILFGNHHEIRRILESLEVDLDGLREIGPKIIVKTCGANGSEIYSNNEKIKIDAIVR
EAVDPTGAGDSYRAGFLSRFLNGESLEQSAKFASSVSSFIVEEQGCQTNMPTFDDAFDRMSEFY

Sequences:

>Translated_304_residues
MAKNRDLLSIGHSALDYIIRVPEFPKANFSAPINDMKTFNGGAAANVALVGAKLGLKTSLVSAVGGDFKKSNYYEIMESL
DVNTDSLIIVPGETSPTAFVLTDENDDQISYFYWGAAKEFASSKVPTQAISNAEAVHLATGDPHFNWKCSEEAKKQDLLV
SFDPGQDLGMYDTDKLRDVITNTTILFGNHHEIRRILESLEVDLDGLREIGPKIIVKTCGANGSEIYSNNEKIKIDAIVR
EAVDPTGAGDSYRAGFLSRFLNGESLEQSAKFASSVSSFIVEEQGCQTNMPTFDDAFDRMSEFY
>Mature_303_residues
AKNRDLLSIGHSALDYIIRVPEFPKANFSAPINDMKTFNGGAAANVALVGAKLGLKTSLVSAVGGDFKKSNYYEIMESLD
VNTDSLIIVPGETSPTAFVLTDENDDQISYFYWGAAKEFASSKVPTQAISNAEAVHLATGDPHFNWKCSEEAKKQDLLVS
FDPGQDLGMYDTDKLRDVITNTTILFGNHHEIRRILESLEVDLDGLREIGPKIIVKTCGANGSEIYSNNEKIKIDAIVRE
AVDPTGAGDSYRAGFLSRFLNGESLEQSAKFASSVSSFIVEEQGCQTNMPTFDDAFDRMSEFY

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=300, Percent_Identity=24.3333333333333, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24583886, Length=318, Percent_Identity=24.8427672955975, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: 2.7.1.15

Molecular weight: Translated: 33298; Mature: 33166

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNRDLLSIGHSALDYIIRVPEFPKANFSAPINDMKTFNGGAAANVALVGAKLGLKTSL
CCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEHHHCHHHHH
VSAVGGDFKKSNYYEIMESLDVNTDSLIIVPGETSPTAFVLTDENDDQISYFYWGAAKEF
HHHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCHHHH
ASSKVPTQAISNAEAVHLATGDPHFNWKCSEEAKKQDLLVSFDPGQDLGMYDTDKLRDVI
HCCCCCHHHHCCCCEEEEECCCCCCCEEECCHHCCCCEEEEECCCCCCCCCCHHHHHHHH
TNTTILFGNHHEIRRILESLEVDLDGLREIGPKIIVKTCGANGSEIYSNNEKIKIDAIVR
HCCEEEECCHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCEECCCCEEEEHHHHH
EAVDPTGAGDSYRAGFLSRFLNGESLEQSAKFASSVSSFIVEEQGCQTNMPTFDDAFDRM
HHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SEFY
HHCC
>Mature Secondary Structure 
AKNRDLLSIGHSALDYIIRVPEFPKANFSAPINDMKTFNGGAAANVALVGAKLGLKTSL
CCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEHHHCHHHHH
VSAVGGDFKKSNYYEIMESLDVNTDSLIIVPGETSPTAFVLTDENDDQISYFYWGAAKEF
HHHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCHHHH
ASSKVPTQAISNAEAVHLATGDPHFNWKCSEEAKKQDLLVSFDPGQDLGMYDTDKLRDVI
HCCCCCHHHHCCCCEEEEECCCCCCCEEECCHHCCCCEEEEECCCCCCCCCCHHHHHHHH
TNTTILFGNHHEIRRILESLEVDLDGLREIGPKIIVKTCGANGSEIYSNNEKIKIDAIVR
HCCEEEECCHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCEECCCCEEEEHHHHH
EAVDPTGAGDSYRAGFLSRFLNGESLEQSAKFASSVSSFIVEEQGCQTNMPTFDDAFDRM
HHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SEFY
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-ribose

Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]