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The map label for this gene is 148643355

Identifier: 148643355

GI number: 148643355

Start: 1301632

End: 1302570

Strand: Reverse

Name: 148643355

Synonym: Msm_1295

Alternate gene names: NA

Gene position: 1302570-1301632 (Counterclockwise)

Preceding gene: 148643356

Following gene: 148643352

Centisome position: 70.29

GC content: 35.46

Gene sequence:

>939_bases
ATGGAAATTCTAAAACCTGATCAGTTAAAAGAAAAATTTAATGACCCCTGGATTGCACCCTACCAAAAAGTATTGACAAT
GGTAGATGGAGATAAAGTCGAAATCGTTGAATTCCACCCTTGTATTTCAGGATCACACTGGTTACTTTACCAATACAAAA
ACAACAGTGATTTAATTGATTCTGCATACAGAGATGGAAACAAACATGTTTATTCATGCCATATAGGTTGTGCTCCACTT
GATTTAAAAGCTAGTTTTAATGCAGCAGGAATTGATGAGATTATTGTTGATGGAGATGAAGTCAAAGTAACTCATGCAGG
CCTTGCTGGAGCTGGTGTAGGTGCTGGAATGTGTAGAGGAATGGGCGAAGGTGTTAAATACATTGAACTTCTTGAAGAAG
GGGGAGGTTCTAAAGTAGGAAGAGCCAGAGTAGTTACCCCTAAACTTGAAAAAGTAGTTATTGGTGTCGATGACACTGAT
ATTAAAGATGCTGGTGCTACCTGGACAATGGCTCATAATTTAGGTGTTGAACTTAAAAATGAAGGATTTGAATATTTGGA
TCACATTATTGTTCAGTTATATCCCCATAACCCACACAAAACACAAAATTGCGTTTCAATTGCATTAACTTTTGCAGTGC
CTGAAGATAAAAAAGAAGAATTAATCAAAAGAACTGTAGAAATTCTTAAAAGAGATACATTATCTGATAAAACCGCAATT
GCAGTTTTAGAAGGATTAGAAATTCCTGAAAAATTAAGACAGTATTCAATAGCTACCAAGTCTGGAATGATGGATATTGA
AACTGCTGAAGCTACAGCTAAAGAATTAGGTATTGATTTAATAGCTGTTACAGGAGACCAAGGAAAAGTTGGTGCTCTTG
CAGCTCTTGGACTTTATAATGATGTTGAAGAAGCTGTAAAAGTTTATGACAAATCATAA

Upstream 100 bases:

>100_bases
TGACAAGATTAGATGCACACAAACGTGTAGATTACGGTAAAAGAGCTGTTGAAGCAGCTATTAAAATGTGCGATAGATTA
AACGAAATTTAGATGATTAC

Downstream 100 bases:

>100_bases
ACTTTCTTTTTTTATTTTTATAAATTTAAATTAATGAAAAATCCCTGATTGATGTTAGTTATATGTTTTATTGAATTAGC
AGTGCTATTTTCAAATCTAA

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MEILKPDQLKEKFNDPWIAPYQKVLTMVDGDKVEIVEFHPCISGSHWLLYQYKNNSDLIDSAYRDGNKHVYSCHIGCAPL
DLKASFNAAGIDEIIVDGDEVKVTHAGLAGAGVGAGMCRGMGEGVKYIELLEEGGGSKVGRARVVTPKLEKVVIGVDDTD
IKDAGATWTMAHNLGVELKNEGFEYLDHIIVQLYPHNPHKTQNCVSIALTFAVPEDKKEELIKRTVEILKRDTLSDKTAI
AVLEGLEIPEKLRQYSIATKSGMMDIETAEATAKELGIDLIAVTGDQGKVGALAALGLYNDVEEAVKVYDKS

Sequences:

>Translated_312_residues
MEILKPDQLKEKFNDPWIAPYQKVLTMVDGDKVEIVEFHPCISGSHWLLYQYKNNSDLIDSAYRDGNKHVYSCHIGCAPL
DLKASFNAAGIDEIIVDGDEVKVTHAGLAGAGVGAGMCRGMGEGVKYIELLEEGGGSKVGRARVVTPKLEKVVIGVDDTD
IKDAGATWTMAHNLGVELKNEGFEYLDHIIVQLYPHNPHKTQNCVSIALTFAVPEDKKEELIKRTVEILKRDTLSDKTAI
AVLEGLEIPEKLRQYSIATKSGMMDIETAEATAKELGIDLIAVTGDQGKVGALAALGLYNDVEEAVKVYDKS
>Mature_312_residues
MEILKPDQLKEKFNDPWIAPYQKVLTMVDGDKVEIVEFHPCISGSHWLLYQYKNNSDLIDSAYRDGNKHVYSCHIGCAPL
DLKASFNAAGIDEIIVDGDEVKVTHAGLAGAGVGAGMCRGMGEGVKYIELLEEGGGSKVGRARVVTPKLEKVVIGVDDTD
IKDAGATWTMAHNLGVELKNEGFEYLDHIIVQLYPHNPHKTQNCVSIALTFAVPEDKKEELIKRTVEILKRDTLSDKTAI
AVLEGLEIPEKLRQYSIATKSGMMDIETAEATAKELGIDLIAVTGDQGKVGALAALGLYNDVEEAVKVYDKS

Specific function: Unknown

COG id: COG1571

COG function: function code R; Predicted DNA-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013696
- InterPro:   IPR017674 [H]

Pfam domain/function: PF08489 DUF1743 [H]

EC number: NA

Molecular weight: Translated: 34041; Mature: 34041

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILKPDQLKEKFNDPWIAPYQKVLTMVDGDKVEIVEFHPCISGSHWLLYQYKNNSDLID
CCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHH
SAYRDGNKHVYSCHIGCAPLDLKASFNAAGIDEIIVDGDEVKVTHAGLAGAGVGAGMCRG
HHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEECCCEEEEEECCCCCCCCCHHHHHC
MGEGVKYIELLEEGGGSKVGRARVVTPKLEKVVIGVDDTDIKDAGATWTMAHNLGVELKN
CCCCHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCEECC
EGFEYLDHIIVQLYPHNPHKTQNCVSIALTFAVPEDKKEELIKRTVEILKRDTLSDKTAI
CCHHHHHHHEEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHH
AVLEGLEIPEKLRQYSIATKSGMMDIETAEATAKELGIDLIAVTGDQGKVGALAALGLYN
HHHHCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH
DVEEAVKVYDKS
HHHHHHHHHCCC
>Mature Secondary Structure
MEILKPDQLKEKFNDPWIAPYQKVLTMVDGDKVEIVEFHPCISGSHWLLYQYKNNSDLID
CCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHH
SAYRDGNKHVYSCHIGCAPLDLKASFNAAGIDEIIVDGDEVKVTHAGLAGAGVGAGMCRG
HHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEECCCEEEEEECCCCCCCCCHHHHHC
MGEGVKYIELLEEGGGSKVGRARVVTPKLEKVVIGVDDTDIKDAGATWTMAHNLGVELKN
CCCCHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCEECC
EGFEYLDHIIVQLYPHNPHKTQNCVSIALTFAVPEDKKEELIKRTVEILKRDTLSDKTAI
CCHHHHHHHEEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHH
AVLEGLEIPEKLRQYSIATKSGMMDIETAEATAKELGIDLIAVTGDQGKVGALAALGLYN
HHHHCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH
DVEEAVKVYDKS
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]