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The map label for this gene is 148643310

Identifier: 148643310

GI number: 148643310

Start: 1255030

End: 1255464

Strand: Reverse

Name: 148643310

Synonym: Msm_1250

Alternate gene names: NA

Gene position: 1255464-1255030 (Counterclockwise)

Preceding gene: 148643312

Following gene: 148643309

Centisome position: 67.75

GC content: 28.74

Gene sequence:

>435_bases
TTGGCCATGTTCAGACGTAAAAAAAATGTTGATCAACTTTCAAAAAAAATTATGAGGCATTGTTCTAATGGTTTAACTCA
TATTATTATATTATGGATTATTAGTAAAGAAAAAATCCATGGTTATGGGATTATGAAAAAGTTAGATGAATTTTTTAGTT
CGTGTAATCCTACTGAGTATAATAAAACAAATTCAAGTAAAATTTATCCGATTCTAAGGAAATTAGAAAAAACTGGGATT
ATAAAAGGAGAATGGGGAGTTAGCAATAATAAAAGTGTTAAGTATTACTCTCTTACAGAGGAAGGTGAAATCTTACTTAA
AAGTTTTAAAAGTGAGTTTGCGCACCTGATTAATAGCCCTCTTTGGTTAAGTTTTATTGAAGATATGTCAGATAATGAAA
TGCATAAGGTGGAAAACGATGAGAAATGCAATTGA

Upstream 100 bases:

>100_bases
TAAGATTAACTTTATATATTATAATTATATATATGTTATTTTGTTATATATCAAAATTTAACATATATAATTTTTTTAAA
TAACAATTAGGAGGTTTGAG

Downstream 100 bases:

>100_bases
AACTAAGAATCTTACAAAGGTTTATAAAAATTTCACTGCTGTTAATTCTTTAAATTTAAAAGTTCCTGAAAAAAGTATTT
TTGGATTACTTGGTCCAAAT

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MAMFRRKKNVDQLSKKIMRHCSNGLTHIIILWIISKEKIHGYGIMKKLDEFFSSCNPTEYNKTNSSKIYPILRKLEKTGI
IKGEWGVSNNKSVKYYSLTEEGEILLKSFKSEFAHLINSPLWLSFIEDMSDNEMHKVENDEKCN

Sequences:

>Translated_144_residues
MAMFRRKKNVDQLSKKIMRHCSNGLTHIIILWIISKEKIHGYGIMKKLDEFFSSCNPTEYNKTNSSKIYPILRKLEKTGI
IKGEWGVSNNKSVKYYSLTEEGEILLKSFKSEFAHLINSPLWLSFIEDMSDNEMHKVENDEKCN
>Mature_143_residues
AMFRRKKNVDQLSKKIMRHCSNGLTHIIILWIISKEKIHGYGIMKKLDEFFSSCNPTEYNKTNSSKIYPILRKLEKTGII
KGEWGVSNNKSVKYYSLTEEGEILLKSFKSEFAHLINSPLWLSFIEDMSDNEMHKVENDEKCN

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16852; Mature: 16721

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMFRRKKNVDQLSKKIMRHCSNGLTHIIILWIISKEKIHGYGIMKKLDEFFSSCNPTEY
CCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
NKTNSSKIYPILRKLEKTGIIKGEWGVSNNKSVKYYSLTEEGEILLKSFKSEFAHLINSP
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCC
LWLSFIEDMSDNEMHKVENDEKCN
HHHHHHHCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
AMFRRKKNVDQLSKKIMRHCSNGLTHIIILWIISKEKIHGYGIMKKLDEFFSSCNPTEY
CCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
NKTNSSKIYPILRKLEKTGIIKGEWGVSNNKSVKYYSLTEEGEILLKSFKSEFAHLINSP
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCC
LWLSFIEDMSDNEMHKVENDEKCN
HHHHHHHCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA