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The map label for this gene is patS [H]

Identifier: 148643312

GI number: 148643312

Start: 1256269

End: 1257063

Strand: Reverse

Name: patS [H]

Synonym: Msm_1252

Alternate gene names: 148643312

Gene position: 1257063-1256269 (Counterclockwise)

Preceding gene: 148643316

Following gene: 148643310

Centisome position: 67.83

GC content: 29.31

Gene sequence:

>795_bases
ATGAAAAAAGCTATTGTGTTTGATAATTCTGGAACTTTACTTGAACGCTACAGGGTTATTAAAGATGTTTCAACTGGAGA
ATTATTCACTGATGTTAATTCATTGCACTTAATTGATTCTATGGATTCCTTAGCACTTGTAGTTCTTCAGTTCAATACAA
ATTGTCTTTTGAATTTGGATAGTAACACTTTAATTTCAGATGTGATTAAACAGCATAATATTGACTTTGATGTTAGCTTT
ACAAGCTGTGAAACTACTAAAGAAGAAGTTACTGATATTTTAGAAAATGAAAATCAGGCAACTATTAGTGATATTACTGA
TGGGTTTACTATTTTAAAAGAAAAAATCCCTAAAATGGAACTTTGTAACGGACCTGCAGTAATTATCGATATTAATAAAA
ATAAAATAGTTTATACTATTACTTCTGCAGGCAAACTCTTTTCTGAAGTCATAGACACAATTAAGATTTTACAATCCAGA
GGCATTGAAATTTATATTGCATCTGGAGACAGAAAGGGAGCCATTAACAAATTAGCTGAAATTTTAAATGTCAATAAAAA
ACATGCCTTTGGAACAGTTTCTCCAAAAGGCAAATGTAAGGTTGTAAGATGTTTAAAAGACAGAGGATATAAAGTAATGA
TGGTTGGAGATGGTCTCAATGATGTTTTAGCTTTTAATAATGCTGATGTATCTGTTCTAACTGTTGAACAGGAAGAAGAA
GTTTCTCCAAAACTGATTAATAAAACAGATTATGTTATTCAAAAAATTTCAGAAGTTATTTCAATAGATTTTTAA

Upstream 100 bases:

>100_bases
CATACCATAGAAATTAAAATAATATTTGCCTAAATGAATATTTTTTTACAAAATTATAAATAGTGTACAAGTAATTAAAT
AAAATTAAAGAGGGGTCAAA

Downstream 100 bases:

>100_bases
TAACTTCTTTACTTTTTAAAACATTATCAAAGTTATTTAACTCAATAATTCCTTTATCTACTTTTTTAAGAAGATTCAAA
TCAAGAGTTCCTTCACCTAA

Product: cation transporter HAD ATPase

Products: ADP; Orthophosphate. [C]

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKKAIVFDNSGTLLERYRVIKDVSTGELFTDVNSLHLIDSMDSLALVVLQFNTNCLLNLDSNTLISDVIKQHNIDFDVSF
TSCETTKEEVTDILENENQATISDITDGFTILKEKIPKMELCNGPAVIIDINKNKIVYTITSAGKLFSEVIDTIKILQSR
GIEIYIASGDRKGAINKLAEILNVNKKHAFGTVSPKGKCKVVRCLKDRGYKVMMVGDGLNDVLAFNNADVSVLTVEQEEE
VSPKLINKTDYVIQKISEVISIDF

Sequences:

>Translated_264_residues
MKKAIVFDNSGTLLERYRVIKDVSTGELFTDVNSLHLIDSMDSLALVVLQFNTNCLLNLDSNTLISDVIKQHNIDFDVSF
TSCETTKEEVTDILENENQATISDITDGFTILKEKIPKMELCNGPAVIIDINKNKIVYTITSAGKLFSEVIDTIKILQSR
GIEIYIASGDRKGAINKLAEILNVNKKHAFGTVSPKGKCKVVRCLKDRGYKVMMVGDGLNDVLAFNNADVSVLTVEQEEE
VSPKLINKTDYVIQKISEVISIDF
>Mature_264_residues
MKKAIVFDNSGTLLERYRVIKDVSTGELFTDVNSLHLIDSMDSLALVVLQFNTNCLLNLDSNTLISDVIKQHNIDFDVSF
TSCETTKEEVTDILENENQATISDITDGFTILKEKIPKMELCNGPAVIIDINKNKIVYTITSAGKLFSEVIDTIKILQSR
GIEIYIASGDRKGAINKLAEILNVNKKHAFGTVSPKGKCKVVRCLKDRGYKVMMVGDGLNDVLAFNNADVSVLTVEQEEE
VSPKLINKTDYVIQKISEVISIDF

Specific function: Most probably acts as a phosphatase in the cytosol [H]

COG id: COG4087

COG function: function code R; Soluble P-type ATPase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 3.6.3.4 [C]

Molecular weight: Translated: 29313; Mature: 29313

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAIVFDNSGTLLERYRVIKDVSTGELFTDVNSLHLIDSMDSLALVVLQFNTNCLLNLD
CCCEEEECCCCCHHHHHHHHHCCCCCHHHHCCCCEEECCCCCCEEEEEEEECCCEEEEEC
SNTLISDVIKQHNIDFDVSFTSCETTKEEVTDILENENQATISDITDGFTILKEKIPKME
CCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCEE
LCNGPAVIIDINKNKIVYTITSAGKLFSEVIDTIKILQSRGIEIYIASGDRKGAINKLAE
ECCCCEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH
ILNVNKKHAFGTVSPKGKCKVVRCLKDRGYKVMMVGDGLNDVLAFNNADVSVLTVEQEEE
HHCCCCCCCEECCCCCCCHHHEEEHHHCCCEEEEEECCCCHHEEECCCCEEEEEECCCCC
VSPKLINKTDYVIQKISEVISIDF
CCCHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKAIVFDNSGTLLERYRVIKDVSTGELFTDVNSLHLIDSMDSLALVVLQFNTNCLLNLD
CCCEEEECCCCCHHHHHHHHHCCCCCHHHHCCCCEEECCCCCCEEEEEEEECCCEEEEEC
SNTLISDVIKQHNIDFDVSFTSCETTKEEVTDILENENQATISDITDGFTILKEKIPKME
CCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCEE
LCNGPAVIIDINKNKIVYTITSAGKLFSEVIDTIKILQSRGIEIYIASGDRKGAINKLAE
ECCCCEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH
ILNVNKKHAFGTVSPKGKCKVVRCLKDRGYKVMMVGDGLNDVLAFNNADVSVLTVEQEEE
HHCCCCCCCEECCCCCCCHHHEEEHHHCCCEEEEEECCCCHHEEECCCCEEEEEECCCCC
VSPKLINKTDYVIQKISEVISIDF
CCCHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O [C]

Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087; 10760521 [H]