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The map label for this gene is 148643189

Identifier: 148643189

GI number: 148643189

Start: 1109178

End: 1110365

Strand: Reverse

Name: 148643189

Synonym: Msm_1129

Alternate gene names: NA

Gene position: 1110365-1109178 (Counterclockwise)

Preceding gene: 148643190

Following gene: 148643184

Centisome position: 59.92

GC content: 34.68

Gene sequence:

>1188_bases
ATGTTAGTTAATGCTGATTTTCATGTTCACAGCTGTTTTTCAATGGCTTCATCTAAAGACATGCTAATAAAAAATATGGC
TCCTAAATCAAAACTTAAGGGATTGCAACTTTTGGGAACTGGAGATGCATTTCATCCGGGCTGGTTAAACATTATTGAGG
AAAGTACAACTTGTAAGGGAGATGGAATTTACACTGCAGATGATATGGATTTTGTTCTAACAACAGAAGTTGAAGGAAAA
AACAGGATTCATCATTTGATAATAATTCCGGATATTGGTACTGCAAGGGAACTGTCTGAAAAACTGGTTTCTAAAAATAA
GGAAAGTGACGGGAGACCTAGGACAAAGTATTCTGGAGCAGAACTTTTAGAAATGGTTAAAGAGTATGATTGTTTAATTG
GACCGGCTCATGCTTTTACTCCATGGACAGGAATGTATAAATCTTTTGACAGTATTTATGATTGCTATGGCAAGGCTCCT
GATTTTGTAGAGCTTGGATTGTCTGCAGATACATTTATGGCAGATACTGTAGCTGAACTTAAGGATTTCCCGTTTCTTAC
AAATTCTGATGCACACTCTCCGTGGCCACACAGATTAGGTAGGGAGTTTAATCAAATTGAGCTTGAAGATATGTCATACT
CATCAATAAAAAAAGCAATAAAAAACAAAGATATTAAAGCAAATTATGGGTTGGTGCCAAATCTTGGTAAATATCATATG
ACTGCATGTACCAAATGCTACAAATTAGTTGATCCGTTAATAGCTAAGGAAAATAAGATGAAATGCAGCTGTGGGGGAAC
AATTAAAAAAGGGGTTGATTTCAGAATAAGTGAAATAGCTGATTATGATGAACCGAAACATCCTGATTTCAGACCTAAAT
ATGTTCATTTAATGCCTCTGGCTGAATTAATATCAACAGTTTATGACAAGGGAGTTACAACAAAAACAGTTCAGAGAAAA
TGGCAAAATCTGATAGATAACTTTGGAACTGAAATTGATATATTGGTTAATGCATCTATAGAAGAGATAGCTAAAACAGA
TCCGTCAATTTCTCCGGCTATTGAGGCTTTTAGGAATAAAACCATACACATTACTCCAGGAGGCGGAGGAAAATACGGTG
AAATTTCTTTTGATAAAAAATTAGAAAAAAGAGAAGCTGAAACTTTAACTACTTTAGATAACTTTTAA

Upstream 100 bases:

>100_bases
CTGGATGCTGATTTAAAAAAACATGAAGGAAGTCTGGATTACAAAGAGTTTAAGAAAATATTAGATGATTTAATATATTA
TTAATAGCTAATTATTATCC

Downstream 100 bases:

>100_bases
AAAATAGCTAAAGTTCATTTAAGTATTTTTTAATACTTTTTAACTCTTTTTTACACTTCAGGCCTTTTAGTCCAACAATT
TCAACATAATATACTGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MLVNADFHVHSCFSMASSKDMLIKNMAPKSKLKGLQLLGTGDAFHPGWLNIIEESTTCKGDGIYTADDMDFVLTTEVEGK
NRIHHLIIIPDIGTARELSEKLVSKNKESDGRPRTKYSGAELLEMVKEYDCLIGPAHAFTPWTGMYKSFDSIYDCYGKAP
DFVELGLSADTFMADTVAELKDFPFLTNSDAHSPWPHRLGREFNQIELEDMSYSSIKKAIKNKDIKANYGLVPNLGKYHM
TACTKCYKLVDPLIAKENKMKCSCGGTIKKGVDFRISEIADYDEPKHPDFRPKYVHLMPLAELISTVYDKGVTTKTVQRK
WQNLIDNFGTEIDILVNASIEEIAKTDPSISPAIEAFRNKTIHITPGGGGKYGEISFDKKLEKREAETLTTLDNF

Sequences:

>Translated_395_residues
MLVNADFHVHSCFSMASSKDMLIKNMAPKSKLKGLQLLGTGDAFHPGWLNIIEESTTCKGDGIYTADDMDFVLTTEVEGK
NRIHHLIIIPDIGTARELSEKLVSKNKESDGRPRTKYSGAELLEMVKEYDCLIGPAHAFTPWTGMYKSFDSIYDCYGKAP
DFVELGLSADTFMADTVAELKDFPFLTNSDAHSPWPHRLGREFNQIELEDMSYSSIKKAIKNKDIKANYGLVPNLGKYHM
TACTKCYKLVDPLIAKENKMKCSCGGTIKKGVDFRISEIADYDEPKHPDFRPKYVHLMPLAELISTVYDKGVTTKTVQRK
WQNLIDNFGTEIDILVNASIEEIAKTDPSISPAIEAFRNKTIHITPGGGGKYGEISFDKKLEKREAETLTTLDNF
>Mature_395_residues
MLVNADFHVHSCFSMASSKDMLIKNMAPKSKLKGLQLLGTGDAFHPGWLNIIEESTTCKGDGIYTADDMDFVLTTEVEGK
NRIHHLIIIPDIGTARELSEKLVSKNKESDGRPRTKYSGAELLEMVKEYDCLIGPAHAFTPWTGMYKSFDSIYDCYGKAP
DFVELGLSADTFMADTVAELKDFPFLTNSDAHSPWPHRLGREFNQIELEDMSYSSIKKAIKNKDIKANYGLVPNLGKYHM
TACTKCYKLVDPLIAKENKMKCSCGGTIKKGVDFRISEIADYDEPKHPDFRPKYVHLMPLAELISTVYDKGVTTKTVQRK
WQNLIDNFGTEIDILVNASIEEIAKTDPSISPAIEAFRNKTIHITPGGGGKYGEISFDKKLEKREAETLTTLDNF

Specific function: Unknown

COG id: COG1379

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DOD-type homing endonuclease domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005287
- InterPro:   IPR003586
- InterPro:   IPR003587
- InterPro:   IPR006142
- InterPro:   IPR004042
- InterPro:   IPR006141
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44260; Mature: 44260

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVNADFHVHSCFSMASSKDMLIKNMAPKSKLKGLQLLGTGDAFHPGWLNIIEESTTCKG
CEECCCCHHHHHHHHCCCCHHHHHHCCCHHHHCCEEEEECCCCCCCHHHHHHHCCCCCCC
DGIYTADDMDFVLTTEVEGKNRIHHLIIIPDIGTARELSEKLVSKNKESDGRPRTKYSGA
CCEEEECCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH
ELLEMVKEYDCLIGPAHAFTPWTGMYKSFDSIYDCYGKAPDFVELGLSADTFMADTVAEL
HHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHH
KDFPFLTNSDAHSPWPHRLGREFNQIELEDMSYSSIKKAIKNKDIKANYGLVPNLGKYHM
HHCCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
TACTKCYKLVDPLIAKENKMKCSCGGTIKKGVDFRISEIADYDEPKHPDFRPKYVHLMPL
HHHHHHHHHHHHHHCCCCCCEECCCCCHHCCCCEEHHHHHCCCCCCCCCCCCCEEEHHHH
AELISTVYDKGVTTKTVQRKWQNLIDNFGTEIDILVNASIEEIAKTDPSISPAIEAFRNK
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHCCCCCHHHHHHHCCC
TIHITPGGGGKYGEISFDKKLEKREAETLTTLDNF
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLVNADFHVHSCFSMASSKDMLIKNMAPKSKLKGLQLLGTGDAFHPGWLNIIEESTTCKG
CEECCCCHHHHHHHHCCCCHHHHHHCCCHHHHCCEEEEECCCCCCCHHHHHHHCCCCCCC
DGIYTADDMDFVLTTEVEGKNRIHHLIIIPDIGTARELSEKLVSKNKESDGRPRTKYSGA
CCEEEECCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH
ELLEMVKEYDCLIGPAHAFTPWTGMYKSFDSIYDCYGKAPDFVELGLSADTFMADTVAEL
HHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHH
KDFPFLTNSDAHSPWPHRLGREFNQIELEDMSYSSIKKAIKNKDIKANYGLVPNLGKYHM
HHCCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
TACTKCYKLVDPLIAKENKMKCSCGGTIKKGVDFRISEIADYDEPKHPDFRPKYVHLMPL
HHHHHHHHHHHHHHCCCCCCEECCCCCHHCCCCEEHHHHHCCCCCCCCCCCCCEEEHHHH
AELISTVYDKGVTTKTVQRKWQNLIDNFGTEIDILVNASIEEIAKTDPSISPAIEAFRNK
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHCCCCCHHHHHHHCCC
TIHITPGGGGKYGEISFDKKLEKREAETLTTLDNF
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]