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The map label for this gene is 148643158

Identifier: 148643158

GI number: 148643158

Start: 1050311

End: 1050718

Strand: Reverse

Name: 148643158

Synonym: Msm_1098

Alternate gene names: NA

Gene position: 1050718-1050311 (Counterclockwise)

Preceding gene: 148643160

Following gene: 148643157

Centisome position: 56.7

GC content: 31.86

Gene sequence:

>408_bases
ATGGCTAAAAAAGGGTCTGCTGAAGAAAGAGATTTAGTGCATAAACTTTGGGAAAGAGATTTTGCAGCTATGAGAGCTCC
AGCTTCTGGAGGTGCAACTAAAAAACCTTTACCTGATGTTGTAGCAGGAAACGGTAAATTATATTTAGCTATTGAAGTTA
AAACTACAACTAAAGATAAAATTTACATAGATTTTCCTCAAATTGATGCATTATGTGAGTTTTCTGAAAAATTCGGTGCT
AAACCATATATTGGAGTTAAATTTAAGTACACAAAATGGTTATTTTTAGAACCTGAAAAAACTCCACGTACCAAAAGCGA
TAATTATAAAATTGAAAAAGATTTTGCCCTAGAAAAAGCTTTGGAAATTGATGAAATTACCGGCATTGATAGGCAAATGA
AATTTTGA

Upstream 100 bases:

>100_bases
GGGTAGGCGGTCATCCTACGGGACTGTGGATCCTGTGACTCGGGTTCAAATCTCGGCCCCGGCCCCATTATTAAAAACTA
TTTTTTATGAGATTATTTCT

Downstream 100 bases:

>100_bases
TAATAACATTTATATAGTAATTAAATCATATTAATAATAGTATGTTATTATGACATATCTGTTGGGGTTATAGTGTAACC
TGGCATCATCTGGGACTCCA

Product: holliday junction resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAKKGSAEERDLVHKLWERDFAAMRAPASGGATKKPLPDVVAGNGKLYLAIEVKTTTKDKIYIDFPQIDALCEFSEKFGA
KPYIGVKFKYTKWLFLEPEKTPRTKSDNYKIEKDFALEKALEIDEITGIDRQMKF

Sequences:

>Translated_135_residues
MAKKGSAEERDLVHKLWERDFAAMRAPASGGATKKPLPDVVAGNGKLYLAIEVKTTTKDKIYIDFPQIDALCEFSEKFGA
KPYIGVKFKYTKWLFLEPEKTPRTKSDNYKIEKDFALEKALEIDEITGIDRQMKF
>Mature_134_residues
AKKGSAEERDLVHKLWERDFAAMRAPASGGATKKPLPDVVAGNGKLYLAIEVKTTTKDKIYIDFPQIDALCEFSEKFGAK
PYIGVKFKYTKWLFLEPEKTPRTKSDNYKIEKDFALEKALEIDEITGIDRQMKF

Specific function: Unknown

COG id: COG1591

COG function: function code L; Holliday junction resolvase - archaeal type

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR002732
- InterPro:   IPR014428
- InterPro:   IPR011335 [H]

Pfam domain/function: PF01870 Hjc [H]

EC number: NA

Molecular weight: Translated: 15410; Mature: 15279

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKGSAEERDLVHKLWERDFAAMRAPASGGATKKPLPDVVAGNGKLYLAIEVKTTTKDK
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEEEEEEECCCCE
IYIDFPQIDALCEFSEKFGAKPYIGVKFKYTKWLFLEPEKTPRTKSDNYKIEKDFALEKA
EEEECCCHHHHHHHHHHHCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEECHHHHHHHH
LEIDEITGIDRQMKF
CCHHHHCCCCCCCCC
>Mature Secondary Structure 
AKKGSAEERDLVHKLWERDFAAMRAPASGGATKKPLPDVVAGNGKLYLAIEVKTTTKDK
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEEEEEEECCCCE
IYIDFPQIDALCEFSEKFGAKPYIGVKFKYTKWLFLEPEKTPRTKSDNYKIEKDFALEKA
EEEECCCHHHHHHHHHHHCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEECHHHHHHHH
LEIDEITGIDRQMKF
CCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]