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The map label for this gene is ycbL [C]

Identifier: 148643157

GI number: 148643157

Start: 1049442

End: 1050050

Strand: Reverse

Name: ycbL [C]

Synonym: Msm_1097

Alternate gene names: 148643157

Gene position: 1050050-1049442 (Counterclockwise)

Preceding gene: 148643158

Following gene: 148643154

Centisome position: 56.66

GC content: 31.03

Gene sequence:

>609_bases
ATGAATTCTAAAGATATTATATGGATTCCAGGTTATAATTTAGATTCTAACTGTTATCTGATTGATGATATGTTAGTTGA
TACTGGAGCCGGAGATAATAAAGAATACCTTTTTTCTAAACTTAAAGAACATGATGTCAATCCTGAAGATATTAAATTAA
TTGTTAACACACACTGTCATTTTGATCATGTTAATGGTAATTGTTTTTTCCCTAATGCTAAAATAGCTATTCATAAAATT
GATGCAATCGCTTTAATGGAAGATGATAATCCTGATACTGTAGCCAGTCATTTTGGCCATGAAATTAAATGCCATAAAGT
GGATATTGAATTGGAAGAAGGGGATAAAATAAAGGATTTTGAAGTTATTCATACTCCAGGTCATTCTAAAGGAGCTATCT
GTTTGTGGGATGGTGAAAATCTAATTAGTGGAGATACAGTATTTGGTCATGGTGGTGTTGGCAGAACTGACATTGGAGGC
AGTTTTTCTGATTTGAAAAAATCTGTAGAAAAACTGAAAAAATTAGATGTTAAAACAATCTATCCTGGTCATGGGATGAT
TGACAATAATGGGAAAAAGAGTATTGAAATGTCTTATTCTCTTTTTTAA

Upstream 100 bases:

>100_bases
GTACTGAGGCAAGAGACATCCCAGGATCGGGGTTCAAATCCCTGTGACCCCATTTTTATAAAAAACTATTTTTAAATATT
ATAATTTCAATACTATTTTT

Downstream 100 bases:

>100_bases
ATTATTTTTCTAATTTTTTAGCTACTTTTTTAAATGCTCCTCTTTTTACAAGAACAGTAACTTTTTCGCCTCGCCTTATA
ACGCTATCTGTTTGTGGTAT

Product: Zn-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNSKDIIWIPGYNLDSNCYLIDDMLVDTGAGDNKEYLFSKLKEHDVNPEDIKLIVNTHCHFDHVNGNCFFPNAKIAIHKI
DAIALMEDDNPDTVASHFGHEIKCHKVDIELEEGDKIKDFEVIHTPGHSKGAICLWDGENLISGDTVFGHGGVGRTDIGG
SFSDLKKSVEKLKKLDVKTIYPGHGMIDNNGKKSIEMSYSLF

Sequences:

>Translated_202_residues
MNSKDIIWIPGYNLDSNCYLIDDMLVDTGAGDNKEYLFSKLKEHDVNPEDIKLIVNTHCHFDHVNGNCFFPNAKIAIHKI
DAIALMEDDNPDTVASHFGHEIKCHKVDIELEEGDKIKDFEVIHTPGHSKGAICLWDGENLISGDTVFGHGGVGRTDIGG
SFSDLKKSVEKLKKLDVKTIYPGHGMIDNNGKKSIEMSYSLF
>Mature_202_residues
MNSKDIIWIPGYNLDSNCYLIDDMLVDTGAGDNKEYLFSKLKEHDVNPEDIKLIVNTHCHFDHVNGNCFFPNAKIAIHKI
DAIALMEDDNPDTVASHFGHEIKCHKVDIELEEGDKIKDFEVIHTPGHSKGAICLWDGENLISGDTVFGHGGVGRTDIGG
SFSDLKKSVEKLKKLDVKTIYPGHGMIDNNGKKSIEMSYSLF

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42822880, Length=219, Percent_Identity=30.5936073059361, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 22488; Mature: 22488

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKDIIWIPGYNLDSNCYLIDDMLVDTGAGDNKEYLFSKLKEHDVNPEDIKLIVNTHCH
CCCCCEEEECCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHEEEEEECCEE
FDHVNGNCFFPNAKIAIHKIDAIALMEDDNPDTVASHFGHEIKCHKVDIELEEGDKIKDF
EEECCCEEECCCCEEEEEEEEEEEEEECCCCHHHHHHCCCEEEEEEEEEEECCCCCCCCE
EVIHTPGHSKGAICLWDGENLISGDTVFGHGGVGRTDIGGSFSDLKKSVEKLKKLDVKTI
EEEECCCCCCCEEEEECCCCEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
YPGHGMIDNNGKKSIEMSYSLF
CCCCCEECCCCCEEEEEEEEEC
>Mature Secondary Structure
MNSKDIIWIPGYNLDSNCYLIDDMLVDTGAGDNKEYLFSKLKEHDVNPEDIKLIVNTHCH
CCCCCEEEECCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHEEEEEECCEE
FDHVNGNCFFPNAKIAIHKIDAIALMEDDNPDTVASHFGHEIKCHKVDIELEEGDKIKDF
EEECCCEEECCCCEEEEEEEEEEEEEECCCCHHHHHHCCCEEEEEEEEEEECCCCCCCCE
EVIHTPGHSKGAICLWDGENLISGDTVFGHGGVGRTDIGGSFSDLKKSVEKLKKLDVKTI
EEEECCCCCCCEEEEECCCCEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
YPGHGMIDNNGKKSIEMSYSLF
CCCCCEECCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]