| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643143
Identifier: 148643143
GI number: 148643143
Start: 1034988
End: 1035707
Strand: Reverse
Name: 148643143
Synonym: Msm_1083
Alternate gene names: NA
Gene position: 1035707-1034988 (Counterclockwise)
Preceding gene: 148643145
Following gene: 148643142
Centisome position: 55.89
GC content: 37.36
Gene sequence:
>720_bases ATGAACAGAAGAAAAAAACTGATTATACTTATCCTTATTGTATGTATTATTGGGATATTTGCATTTGTAGGAAGTTTCTT TTTAGGAGGTCCTAGTCTGGCTTCAGGTGATAAAAACATATTGGTCCTGGCTAGTGACAAAGATGAACAGCCTGGTGGTG GTGTAGATATGGCATACATGGTTAAACTGGAAAATGGAACTATAGCTAATTATACTCCTGTATATCCTGGTGGAATGACT CATCCTACAAAACAAGCTTTAGGTGGTCTTGAAGGGCCAATGCGTCTTCATGACTGTCTGTGGGATGGCCCGGAACAGGG TATGGAATATGCAAAGGAAATTGTAGAAGCTAATACTGGAATGCATGCTGATGCAGTAGTAATTATATATGATGACGGAT TGGATGCCATTATAGATTCAATTAGGCCACTTAAAGTTGACGGGGTTGAAACGGATCTTGGTGCAACAGATATTGTAAGA CAAAATGATAATTACTCTGGATATCATGGAAGGGATGATGGAATAACTGGAAATATGTCCAGGGGTGATGCTGTAATGGT GTTAGTTAAAGCACTTTCTGAAGCTTCTAAAGATCCAGTTAAGAAAAGTACAATGACCAAGGTAGCTCTAGAAGAATATT CTAAAGGAAATATTGTAATGTCTCCAAGTGGTTCTTTTGTAAAATTACTGACTACAAAAGGTTTTGAAAGCATTTCATAA
Upstream 100 bases:
>100_bases TTATATTGTTTCATTAATTAAAAAGTATGTTTAAGAAAAGAAAAATTATTTATTATATTAAGTTAAAATAAATGTAAAAA AATATTTGATATGTGGGAAT
Downstream 100 bases:
>100_bases AAATATTATAATTTCTTTGTTAAGTTTAATAAAAAATAGTTTGACAGAAGAGAACTCTTAATTGGGGTCTTATAATTGAG GTTGAAAAGTTATATGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNRRKKLIILILIVCIIGIFAFVGSFFLGGPSLASGDKNILVLASDKDEQPGGGVDMAYMVKLENGTIANYTPVYPGGMT HPTKQALGGLEGPMRLHDCLWDGPEQGMEYAKEIVEANTGMHADAVVIIYDDGLDAIIDSIRPLKVDGVETDLGATDIVR QNDNYSGYHGRDDGITGNMSRGDAVMVLVKALSEASKDPVKKSTMTKVALEEYSKGNIVMSPSGSFVKLLTTKGFESIS
Sequences:
>Translated_239_residues MNRRKKLIILILIVCIIGIFAFVGSFFLGGPSLASGDKNILVLASDKDEQPGGGVDMAYMVKLENGTIANYTPVYPGGMT HPTKQALGGLEGPMRLHDCLWDGPEQGMEYAKEIVEANTGMHADAVVIIYDDGLDAIIDSIRPLKVDGVETDLGATDIVR QNDNYSGYHGRDDGITGNMSRGDAVMVLVKALSEASKDPVKKSTMTKVALEEYSKGNIVMSPSGSFVKLLTTKGFESIS >Mature_239_residues MNRRKKLIILILIVCIIGIFAFVGSFFLGGPSLASGDKNILVLASDKDEQPGGGVDMAYMVKLENGTIANYTPVYPGGMT HPTKQALGGLEGPMRLHDCLWDGPEQGMEYAKEIVEANTGMHADAVVIIYDDGLDAIIDSIRPLKVDGVETDLGATDIVR QNDNYSGYHGRDDGITGNMSRGDAVMVLVKALSEASKDPVKKSTMTKVALEEYSKGNIVMSPSGSFVKLLTTKGFESIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25620; Mature: 25620
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRKKLIILILIVCIIGIFAFVGSFFLGGPSLASGDKNILVLASDKDEQPGGGVDMAYM CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEE VKLENGTIANYTPVYPGGMTHPTKQALGGLEGPMRLHDCLWDGPEQGMEYAKEIVEANTG EEECCCEECCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC MHADAVVIIYDDGLDAIIDSIRPLKVDGVETDLGATDIVRQNDNYSGYHGRDDGITGNMS CCCCEEEEEEECCHHHHHHCCCCEEECCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCC RGDAVMVLVKALSEASKDPVKKSTMTKVALEEYSKGNIVMSPSGSFVKLLTTKGFESIS CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCCC >Mature Secondary Structure MNRRKKLIILILIVCIIGIFAFVGSFFLGGPSLASGDKNILVLASDKDEQPGGGVDMAYM CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEE VKLENGTIANYTPVYPGGMTHPTKQALGGLEGPMRLHDCLWDGPEQGMEYAKEIVEANTG EEECCCEECCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC MHADAVVIIYDDGLDAIIDSIRPLKVDGVETDLGATDIVRQNDNYSGYHGRDDGITGNMS CCCCEEEEEEECCHHHHHHCCCCEEECCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCC RGDAVMVLVKALSEASKDPVKKSTMTKVALEEYSKGNIVMSPSGSFVKLLTTKGFESIS CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA