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The map label for this gene is ysaA [C]

Identifier: 148643126

GI number: 148643126

Start: 1023957

End: 1025372

Strand: Reverse

Name: ysaA [C]

Synonym: Msm_1066

Alternate gene names: 148643126

Gene position: 1025372-1023957 (Counterclockwise)

Preceding gene: 148643127

Following gene: 148643125

Centisome position: 55.33

GC content: 33.26

Gene sequence:

>1416_bases
ATGTTTGTATCAACTAATACATGTGATGGAAAAGGGGAATGTATTAAACAGTGTCCTACAAAAGCTATTCGTTTAATTAA
TGGAAAAGCTTTAAGTTGCCTTACTTGTGGTTTATGTTATAAAAATTGTCCAAGTAATGCAATATTCATTAATAGCTATG
GGGGTTATGTTGTAGACAGAGCCAAATGCAGCGGCTGTGGGATGTGTATGTATAACTGCCCTATAGATAATATTAAAATT
GAAGATGGGATTGTTTATGGTATTTGTTCACGTTGCGGAGTTTGTGAAGAAGCTTGCCCATCAAATTCCAGGATTGACAG
CTTTAGATTAACTGAAGAAAAACAGTTGGAGTTTATAAAATCTTTAAGCAATGCATTACCAACATATAAAGGAGTACCTC
ATAAGCCTAGTGAAACAACAGAGGTAACCAGAAGCTATTTCACAACAGATTATGACAGGTGTATTTATTGTGGAAGATGT
GAAAAGTACTGTCCGACAGGTACAATCCAGGTAACTTTAGATAGGGATGAAGGTATTTGCAGTGATTGTGGACTTTGTAG
TGATGTCTGTCCTAATGGTGCAATGAATAAAAACCACATTGTTAATAAAAGCACATGTACACTTTGTTTAAATTGTTTGA
AAGCATGTCCTCATAATGCAATATCTATTGGGAAGTTTAAAATAAATGTAAATCATATTAATCAAAAACCGGAAGGTTCA
ATTATCTCTTGTATTAATTGCGGATTATGCGCTAGTTTGTCTGAAAATGATTCTTTGAGATATGAAGATTCAAAATTAAG
ATATGATCCAACAGAAGATATTGGAGAAAATATACCAAAAGCACATAAAATAGCTATTGATTCTTGTCCGGTAGCTACAT
TAAAAGAAGATGATGAAATGCTTCTTGTTAATGAAATAACTGGCGAAGAACAAAACACACTTGCCGGATTTTGCGTATCC
TGTGGAAACTGTGTTAAAGTCTGTGAAAATGATGCAAGGTTGTTTAAAGTAGCTACTTGGGATGGATCAATAACTGATGA
ATGTATTTCATGTGGAATATGTTGTGAAGTATGTCCTAAGGAAGCTATTACTCTACATAGAGGAACAATCTCTGTTGATT
TAGATAAATGTATTTTATGTGAAAACTGTGGTGTGTACTGTCCAGTTAATGCAATTCCAAGAACTACTATGCATAAAAAA
GAGATTGTTGATGGATTCTGTTTCATTGAACAGCAATTATGTATGCACTGTGGTTTGTGTTATGATATTTGTCCATATGA
TGCAATTAATAAAAATAATGGCAAATTTGAAGTAGATGAAGACAAATGTAAATATTGTGGAGCATGTAAAAACGCCTGTC
CTGCAAATGCATTTATGTTTGAGAGAAATTTTAAAGATTCTATAGAGGAGATCTAA

Upstream 100 bases:

>100_bases
TTTTACACAGATATGCCAATAGCTTCAGGATTTTTCTTTGCATTAATTGGTATTTTTGTAGGTAAATTATTATTCGGAAG
AGGAGATTGAGGGGTTTATA

Downstream 100 bases:

>100_bases
ATGAGAAACATGCTTAAAATAGCACTGGAAGGAGCATTCACTAACTTTAAAAGAATATTTTTCGCAGCAGATAGAGTTAC
TGACATGGAAATGCGAAAAC

Product: energy-converting hydrogenase B, subunit K, EhbK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MFVSTNTCDGKGECIKQCPTKAIRLINGKALSCLTCGLCYKNCPSNAIFINSYGGYVVDRAKCSGCGMCMYNCPIDNIKI
EDGIVYGICSRCGVCEEACPSNSRIDSFRLTEEKQLEFIKSLSNALPTYKGVPHKPSETTEVTRSYFTTDYDRCIYCGRC
EKYCPTGTIQVTLDRDEGICSDCGLCSDVCPNGAMNKNHIVNKSTCTLCLNCLKACPHNAISIGKFKINVNHINQKPEGS
IISCINCGLCASLSENDSLRYEDSKLRYDPTEDIGENIPKAHKIAIDSCPVATLKEDDEMLLVNEITGEEQNTLAGFCVS
CGNCVKVCENDARLFKVATWDGSITDECISCGICCEVCPKEAITLHRGTISVDLDKCILCENCGVYCPVNAIPRTTMHKK
EIVDGFCFIEQQLCMHCGLCYDICPYDAINKNNGKFEVDEDKCKYCGACKNACPANAFMFERNFKDSIEEI

Sequences:

>Translated_471_residues
MFVSTNTCDGKGECIKQCPTKAIRLINGKALSCLTCGLCYKNCPSNAIFINSYGGYVVDRAKCSGCGMCMYNCPIDNIKI
EDGIVYGICSRCGVCEEACPSNSRIDSFRLTEEKQLEFIKSLSNALPTYKGVPHKPSETTEVTRSYFTTDYDRCIYCGRC
EKYCPTGTIQVTLDRDEGICSDCGLCSDVCPNGAMNKNHIVNKSTCTLCLNCLKACPHNAISIGKFKINVNHINQKPEGS
IISCINCGLCASLSENDSLRYEDSKLRYDPTEDIGENIPKAHKIAIDSCPVATLKEDDEMLLVNEITGEEQNTLAGFCVS
CGNCVKVCENDARLFKVATWDGSITDECISCGICCEVCPKEAITLHRGTISVDLDKCILCENCGVYCPVNAIPRTTMHKK
EIVDGFCFIEQQLCMHCGLCYDICPYDAINKNNGKFEVDEDKCKYCGACKNACPANAFMFERNFKDSIEEI
>Mature_471_residues
MFVSTNTCDGKGECIKQCPTKAIRLINGKALSCLTCGLCYKNCPSNAIFINSYGGYVVDRAKCSGCGMCMYNCPIDNIKI
EDGIVYGICSRCGVCEEACPSNSRIDSFRLTEEKQLEFIKSLSNALPTYKGVPHKPSETTEVTRSYFTTDYDRCIYCGRC
EKYCPTGTIQVTLDRDEGICSDCGLCSDVCPNGAMNKNHIVNKSTCTLCLNCLKACPHNAISIGKFKINVNHINQKPEGS
IISCINCGLCASLSENDSLRYEDSKLRYDPTEDIGENIPKAHKIAIDSCPVATLKEDDEMLLVNEITGEEQNTLAGFCVS
CGNCVKVCENDARLFKVATWDGSITDECISCGICCEVCPKEAITLHRGTISVDLDKCILCENCGVYCPVNAIPRTTMHKK
EIVDGFCFIEQQLCMHCGLCYDICPYDAINKNNGKFEVDEDKCKYCGACKNACPANAFMFERNFKDSIEEI

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 13 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012285 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 51885; Mature: 51885

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
13.0 %Cys+Met (Translated Protein)
11.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
13.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVSTNTCDGKGECIKQCPTKAIRLINGKALSCLTCGLCYKNCPSNAIFINSYGGYVVDR
CEECCCCCCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEC
AKCSGCGMCMYNCPIDNIKIEDGIVYGICSRCGVCEEACPSNSRIDSFRLTEEKQLEFIK
CCCCCCCEEEEECCCCCEEECCCEEEEHHHHCCCCHHHCCCCCCCCCEECCHHHHHHHHH
SLSNALPTYKGVPHKPSETTEVTRSYFTTDYDRCIYCGRCEKYCPTGTIQVTLDRDEGIC
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCCCCCCCEEEEEEECCCCCC
SDCGLCSDVCPNGAMNKNHIVNKSTCTLCLNCLKACPHNAISIGKFKINVNHINQKPEGS
CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCC
IISCINCGLCASLSENDSLRYEDSKLRYDPTEDIGENIPKAHKIAIDSCPVATLKEDDEM
EEEEECCCEECCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHEEEECCCCCCEECCCCCE
LLVNEITGEEQNTLAGFCVSCGNCVKVCENDARLFKVATWDGSITDECISCGICCEVCPK
EEEEECCCCCCCHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCCCHHHHHCCCHHHCCCC
EAITLHRGTISVDLDKCILCENCGVYCPVNAIPRTTMHKKEIVDGFCFIEQQLCMHCGLC
HHEEEECCEEEEECCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
YDICPYDAINKNNGKFEVDEDKCKYCGACKNACPANAFMFERNFKDSIEEI
HHCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCC
>Mature Secondary Structure
MFVSTNTCDGKGECIKQCPTKAIRLINGKALSCLTCGLCYKNCPSNAIFINSYGGYVVDR
CEECCCCCCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEC
AKCSGCGMCMYNCPIDNIKIEDGIVYGICSRCGVCEEACPSNSRIDSFRLTEEKQLEFIK
CCCCCCCEEEEECCCCCEEECCCEEEEHHHHCCCCHHHCCCCCCCCCEECCHHHHHHHHH
SLSNALPTYKGVPHKPSETTEVTRSYFTTDYDRCIYCGRCEKYCPTGTIQVTLDRDEGIC
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCCCCCCCEEEEEEECCCCCC
SDCGLCSDVCPNGAMNKNHIVNKSTCTLCLNCLKACPHNAISIGKFKINVNHINQKPEGS
CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCC
IISCINCGLCASLSENDSLRYEDSKLRYDPTEDIGENIPKAHKIAIDSCPVATLKEDDEM
EEEEECCCEECCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHEEEECCCCCCEECCCCCE
LLVNEITGEEQNTLAGFCVSCGNCVKVCENDARLFKVATWDGSITDECISCGICCEVCPK
EEEEECCCCCCCHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCCCHHHHHCCCHHHCCCC
EAITLHRGTISVDLDKCILCENCGVYCPVNAIPRTTMHKKEIVDGFCFIEQQLCMHCGLC
HHEEEECCEEEEECCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
YDICPYDAINKNNGKFEVDEDKCKYCGACKNACPANAFMFERNFKDSIEEI
HHCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCEEEECCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]