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The map label for this gene is 148643125

Identifier: 148643125

GI number: 148643125

Start: 1023471

End: 1023956

Strand: Reverse

Name: 148643125

Synonym: Msm_1065

Alternate gene names: NA

Gene position: 1023956-1023471 (Counterclockwise)

Preceding gene: 148643126

Following gene: 148643124

Centisome position: 55.25

GC content: 32.92

Gene sequence:

>486_bases
ATGAGAAACATGCTTAAAATAGCACTGGAAGGAGCATTCACTAACTTTAAAAGAATATTTTTCGCAGCAGATAGAGTTAC
TGACATGGAAATGCGAAAACAGATAAGTACACTTTCTGTTAAACCGGCAAAAAAAGTAGATGAAGATGCCTGTATTGGTT
GTGGAGGCTGTGCCAATGTTTGTCCAACCAATGCTATTGAAATGAAGAAATTAGCATCTCCGGTAAAATTGACTGACAGC
TGGACAAAAACAGAAGTTCCTGAATTAAATTCGCTAAAATGTGTGGTATGTTATTATTGTCATGATTTCTGCCCTGTATT
TTTATTATATGGTGAAAAAGGAACTATCCATCCAAATACTGTTGGAAATCAGGAAGTGGATGTTTCAGAACTTATTAATC
AGCCAGTTAAAATATCTGATGATAAATTAAAAGTTATTTCACAGTATCTTTCAGATAAAACAATATTAAAAAATAGAGAG
GATTAA

Upstream 100 bases:

>100_bases
TGAAGACAAATGTAAATATTGTGGAGCATGTAAAAACGCCTGTCCTGCAAATGCATTTATGTTTGAGAGAAATTTTAAAG
ATTCTATAGAGGAGATCTAA

Downstream 100 bases:

>100_bases
GGGGGATTATATGGGAATTAAATCATTTTCAAGAGCAAGAGCAATACATCTGATGTTGGTTTATACTGGTGGATGTAATG
GGTGCGATATTGAGATTGTT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRNMLKIALEGAFTNFKRIFFAADRVTDMEMRKQISTLSVKPAKKVDEDACIGCGGCANVCPTNAIEMKKLASPVKLTDS
WTKTEVPELNSLKCVVCYYCHDFCPVFLLYGEKGTIHPNTVGNQEVDVSELINQPVKISDDKLKVISQYLSDKTILKNRE
D

Sequences:

>Translated_161_residues
MRNMLKIALEGAFTNFKRIFFAADRVTDMEMRKQISTLSVKPAKKVDEDACIGCGGCANVCPTNAIEMKKLASPVKLTDS
WTKTEVPELNSLKCVVCYYCHDFCPVFLLYGEKGTIHPNTVGNQEVDVSELINQPVKISDDKLKVISQYLSDKTILKNRE
D
>Mature_161_residues
MRNMLKIALEGAFTNFKRIFFAADRVTDMEMRKQISTLSVKPAKKVDEDACIGCGGCANVCPTNAIEMKKLASPVKLTDS
WTKTEVPELNSLKCVVCYYCHDFCPVFLLYGEKGTIHPNTVGNQEVDVSELINQPVKISDDKLKVISQYLSDKTILKNRE
D

Specific function: Unknown

COG id: COG1143

COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR009051 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 18056; Mature: 18056

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNMLKIALEGAFTNFKRIFFAADRVTDMEMRKQISTLSVKPAKKVDEDACIGCGGCANV
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCC
CPTNAIEMKKLASPVKLTDSWTKTEVPELNSLKCVVCYYCHDFCPVFLLYGEKGTIHPNT
CCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCEEHHHHHHHHCEEEEEECCCCCCCCCC
VGNQEVDVSELINQPVKISDDKLKVISQYLSDKTILKNRED
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCCC
>Mature Secondary Structure
MRNMLKIALEGAFTNFKRIFFAADRVTDMEMRKQISTLSVKPAKKVDEDACIGCGGCANV
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCC
CPTNAIEMKKLASPVKLTDSWTKTEVPELNSLKCVVCYYCHDFCPVFLLYGEKGTIHPNT
CCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCEEHHHHHHHHCEEEEEECCCCCCCCCC
VGNQEVDVSELINQPVKISDDKLKVISQYLSDKTILKNRED
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]