| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
Click here to switch to the map view.
The map label for this gene is pheA [H]
Identifier: 148643112
GI number: 148643112
Start: 1013135
End: 1013941
Strand: Reverse
Name: pheA [H]
Synonym: Msm_1052
Alternate gene names: 148643112
Gene position: 1013941-1013135 (Counterclockwise)
Preceding gene: 148643113
Following gene: 148643111
Centisome position: 54.71
GC content: 31.97
Gene sequence:
>807_bases ATGTGTAATAATATTTCATTTTTAGGTCCGAAAGGAACTTTTACTCATGAAGCAGCTTATATACTTGAGGGAAATTTAAT TCCATATTGCACGATTCCTGCAGTGATGGAAAGTGTTTCAAATGGGGAGTGTCAATTTGGAGTAGTGCCAATTGAAAACT CTATTGAAGGTCCGGTAGGACTTACTCTAGATTCTTTAGCTCATAAATTTGATTTAAAAATATTTAAGGAAATGGTAATT CCAATTAATCAGAATTTAATTGTCAATCCTAAAACAGTTATGAATGACATAACTGATGTATATTCTCATTCTCAGGCAAT AGCTCAATGTCAGGAGTTTATTAGGGATAATGAAATACAGCCCCATTATGCTGTAAGTACTGCCAGTGCAGCTAAAAGTA TTTTAGGCGATAAAACAAAGGCAGCTATTGGAAATTCTAAAGCTGCTGAGATTTATGGCTTGGAAATCCTCAAACCTAAT ATTCAGGATTTGGATAATAACGAAACACGTTTTGTAGTTTTATCGAAAAATGATCATGAGCCTACTGGCAGGGATAAGAC TTCAATAATATTCTCTATTTATGAAGATAAACCTGGTATGCTTTATAAAATATTAGGTGTTTTTGAAAAAGAAAGTATTA ACTTAACAAAAATTGAATCAAGACCTTCTAAAAAAGGTTTGGGCAAATATTTGTTTTTTGTTGATTTTTATGGTCATAGA AAAGATAAAACTGTTCAGAATATTCTAAATGAACTGGATGGGCTTACTTACTTTTTAAAGGTTTTAGGTTCTTACCCGGA GTTTTAG
Upstream 100 bases:
>100_bases AGTCTTAATTAAATTTTAATAGCTAATATTTTAGCTATTTCTTCTTTTTTATTTTTTACAATAAACTTTTTAACTGTCAA GCAATATAACACAAAGTATT
Downstream 100 bases:
>100_bases AAAAACTTTAAATTATTGGTTTAATAAACTAATATTATGATAAGATTCAGGGATGGTATACATGCCAAATGATAAGGAGA AACTTCTAAGAGTTATGCGT
Product: prephenate dehydratase, PheA
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MCNNISFLGPKGTFTHEAAYILEGNLIPYCTIPAVMESVSNGECQFGVVPIENSIEGPVGLTLDSLAHKFDLKIFKEMVI PINQNLIVNPKTVMNDITDVYSHSQAIAQCQEFIRDNEIQPHYAVSTASAAKSILGDKTKAAIGNSKAAEIYGLEILKPN IQDLDNNETRFVVLSKNDHEPTGRDKTSIIFSIYEDKPGMLYKILGVFEKESINLTKIESRPSKKGLGKYLFFVDFYGHR KDKTVQNILNELDGLTYFLKVLGSYPEF
Sequences:
>Translated_268_residues MCNNISFLGPKGTFTHEAAYILEGNLIPYCTIPAVMESVSNGECQFGVVPIENSIEGPVGLTLDSLAHKFDLKIFKEMVI PINQNLIVNPKTVMNDITDVYSHSQAIAQCQEFIRDNEIQPHYAVSTASAAKSILGDKTKAAIGNSKAAEIYGLEILKPN IQDLDNNETRFVVLSKNDHEPTGRDKTSIIFSIYEDKPGMLYKILGVFEKESINLTKIESRPSKKGLGKYLFFVDFYGHR KDKTVQNILNELDGLTYFLKVLGSYPEF >Mature_268_residues MCNNISFLGPKGTFTHEAAYILEGNLIPYCTIPAVMESVSNGECQFGVVPIENSIEGPVGLTLDSLAHKFDLKIFKEMVI PINQNLIVNPKTVMNDITDVYSHSQAIAQCQEFIRDNEIQPHYAVSTASAAKSILGDKTKAAIGNSKAAEIYGLEILKPN IQDLDNNETRFVVLSKNDHEPTGRDKTSIIFSIYEDKPGMLYKILGVFEKESINLTKIESRPSKKGLGKYLFFVDFYGHR KDKTVQNILNELDGLTYFLKVLGSYPEF
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=280, Percent_Identity=31.0714285714286, Blast_Score=125, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324013, Length=291, Percent_Identity=26.4604810996564, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010957 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01842 ACT; PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 29908; Mature: 29908
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00857 PREPHENATE_DEHYDR_1 ; PS00858 PREPHENATE_DEHYDR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNNISFLGPKGTFTHEAAYILEGNLIPYCTIPAVMESVSNGECQFGVVPIENSIEGPVG CCCCCCCCCCCCCCCCCEEEEEECCCCCEECHHHHHHHCCCCCEEEEEEECCCCCCCCCC LTLDSLAHKFDLKIFKEMVIPINQNLIVNPKTVMNDITDVYSHSQAIAQCQEFIRDNEIQ CCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PHYAVSTASAAKSILGDKTKAAIGNSKAAEIYGLEILKPNIQDLDNNETRFVVLSKNDHE CCEEEHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEEECCCHHCCCCCCEEEEEEECCCCC PTGRDKTSIIFSIYEDKPGMLYKILGVFEKESINLTKIESRPSKKGLGKYLFFVDFYGHR CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEEEECCCC KDKTVQNILNELDGLTYFLKVLGSYPEF CCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MCNNISFLGPKGTFTHEAAYILEGNLIPYCTIPAVMESVSNGECQFGVVPIENSIEGPVG CCCCCCCCCCCCCCCCCEEEEEECCCCCEECHHHHHHHCCCCCEEEEEEECCCCCCCCCC LTLDSLAHKFDLKIFKEMVIPINQNLIVNPKTVMNDITDVYSHSQAIAQCQEFIRDNEIQ CCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PHYAVSTASAAKSILGDKTKAAIGNSKAAEIYGLEILKPNIQDLDNNETRFVVLSKNDHE CCEEEHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEEECCCHHCCCCCCEEEEEEECCCCC PTGRDKTSIIFSIYEDKPGMLYKILGVFEKESINLTKIESRPSKKGLGKYLFFVDFYGHR CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEEEECCCC KDKTVQNILNELDGLTYFLKVLGSYPEF CCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]