| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643111
Identifier: 148643111
GI number: 148643111
Start: 1012402
End: 1013082
Strand: Reverse
Name: 148643111
Synonym: Msm_1051
Alternate gene names: NA
Gene position: 1013082-1012402 (Counterclockwise)
Preceding gene: 148643112
Following gene: 148643110
Centisome position: 54.67
GC content: 35.24
Gene sequence:
>681_bases ATGGTATACATGCCAAATGATAAGGAGAAACTTCTAAGAGTTATGCGTTGTTTAGATGCAGACTATGCTCATGGCAAAAT TTCTGAAGAAAAATACAGATATTTTCGCTCTAAATATGAAGATAAGCTCAATACATTAGATGCTCGTGATGCTACTAATA GAATTAGGTCTATGCAGGGTAAACCATCTGGTAAAAGAAAAACTAACCCTAAACCTCCTAAACTTAATAAGAAGAAAAAA GAGGAGCAAGATTTAGTTCAAAAATATATTATCAATCCAAAAAAAGGAGATAAAGATTTTAACAAAGAGAAAAAACCTCC TATGGATAATGGTACTTTTAAATTAATTGCGGTTTTAGTTTTAGTAATCGGATTTACTGCAGGTATTGGTTATGGAGTTT TAACTTTTGACTTTGGAAACATTTCAGTAACTGATGCGCAGGCTATTGTTGAGGATACGGCATTTCCAGAGGTTGAAGAA GTCAAAGTAAATGATACGGATAATGATTCTGTTCAAGTTGGAGATACTTATACTTCAGATAACTCATACGATAGTGGGGA TTCATCTTCTGGTCAAGGTTCAGGAAGTTATGATTCTGGAACTGGTGGTGAAGAGTCTGGTTCTGGAAGTAGTTCTGGAT CCGGAGATTCTGGAACTGTTGAAGGAACTGTGACAGGATAG
Upstream 100 bases:
>100_bases GGGCTTACTTACTTTTTAAAGGTTTTAGGTTCTTACCCGGAGTTTTAGAAAAACTTTAAATTATTGGTTTAATAAACTAA TATTATGATAAGATTCAGGG
Downstream 100 bases:
>100_bases AAGTTAATTAATGGTGAATTTATGAAAAAAAATATTATATGTGGAGTTATAATAATTGTAGCAATTGTTTGTGTGTTCGG ATACTTGATTATGAATAATG
Product: putative endoglucanase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MVYMPNDKEKLLRVMRCLDADYAHGKISEEKYRYFRSKYEDKLNTLDARDATNRIRSMQGKPSGKRKTNPKPPKLNKKKK EEQDLVQKYIINPKKGDKDFNKEKKPPMDNGTFKLIAVLVLVIGFTAGIGYGVLTFDFGNISVTDAQAIVEDTAFPEVEE VKVNDTDNDSVQVGDTYTSDNSYDSGDSSSGQGSGSYDSGTGGEESGSGSSSGSGDSGTVEGTVTG
Sequences:
>Translated_226_residues MVYMPNDKEKLLRVMRCLDADYAHGKISEEKYRYFRSKYEDKLNTLDARDATNRIRSMQGKPSGKRKTNPKPPKLNKKKK EEQDLVQKYIINPKKGDKDFNKEKKPPMDNGTFKLIAVLVLVIGFTAGIGYGVLTFDFGNISVTDAQAIVEDTAFPEVEE VKVNDTDNDSVQVGDTYTSDNSYDSGDSSSGQGSGSYDSGTGGEESGSGSSSGSGDSGTVEGTVTG >Mature_226_residues MVYMPNDKEKLLRVMRCLDADYAHGKISEEKYRYFRSKYEDKLNTLDARDATNRIRSMQGKPSGKRKTNPKPPKLNKKKK EEQDLVQKYIINPKKGDKDFNKEKKPPMDNGTFKLIAVLVLVIGFTAGIGYGVLTFDFGNISVTDAQAIVEDTAFPEVEE VKVNDTDNDSVQVGDTYTSDNSYDSGDSSSGQGSGSYDSGTGGEESGSGSSSGSGDSGTVEGTVTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24601; Mature: 24601
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYMPNDKEKLLRVMRCLDADYAHGKISEEKYRYFRSKYEDKLNTLDARDATNRIRSMQG CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC KPSGKRKTNPKPPKLNKKKKEEQDLVQKYIINPKKGDKDFNKEKKPPMDNGTFKLIAVLV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LVIGFTAGIGYGVLTFDFGNISVTDAQAIVEDTAFPEVEEVKVNDTDNDSVQVGDTYTSD HHHHHHHCCCCEEEEEECCCEEECHHHHHHHHCCCCCHHEEECCCCCCCCEEECCEECCC NSYDSGDSSSGQGSGSYDSGTGGEESGSGSSSGSGDSGTVEGTVTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MVYMPNDKEKLLRVMRCLDADYAHGKISEEKYRYFRSKYEDKLNTLDARDATNRIRSMQG CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC KPSGKRKTNPKPPKLNKKKKEEQDLVQKYIINPKKGDKDFNKEKKPPMDNGTFKLIAVLV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LVIGFTAGIGYGVLTFDFGNISVTDAQAIVEDTAFPEVEEVKVNDTDNDSVQVGDTYTSD HHHHHHHCCCCEEEEEECCCEEECHHHHHHHHCCCCCHHEEECCCCCCCCEEECCEECCC NSYDSGDSSSGQGSGSYDSGTGGEESGSGSSSGSGDSGTVEGTVTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA