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The map label for this gene is ydiK [C]

Identifier: 148643102

GI number: 148643102

Start: 1004950

End: 1005996

Strand: Reverse

Name: ydiK [C]

Synonym: Msm_1042

Alternate gene names: 148643102

Gene position: 1005996-1004950 (Counterclockwise)

Preceding gene: 148643103

Following gene: 148643101

Centisome position: 54.29

GC content: 30.75

Gene sequence:

>1047_bases
ATGGAAAAAGACTTAAAAGAATATATAACTCCTCCAGTATTGCTGGTACTGTTCTTGCTTGGAATATCACTAATGATTGT
ATCTCCGGTTTTGAATATGGTTATATTGGGGGCAATATTAGCTTATGCTATCCGCCCATTAGCTAGAAAAATAACTTCTA
AAATAAAAATCAGATCAGTTTCTATTTTTCTGGCTGTAATTTTGGTTATGATTCCATTGGTTATTTTAATTGCATATATT
ATTTCAGTAATATCTGGTGTTTTATCTGATGTGTTGGTAGTTAATCCAAGTGGTTTTAACTTAAATTTGGATACTGTAAT
TAATCAGATGGTTAATAGCCTGCCGGCAGATATAAGCTCTGGTATTGATACTGCATCAATTAAATCATCTTTATCCGGTT
TTATAAAGGATATTGGAAATGTGGTGCTGGATTATATTGTAAGCTTGGCCAGCAAACTTCTTTCAATTTCTGTAGATTTA
TTTATTTTATTCGCATCAATATATTACTTTATTCGTGATGGAGATAACTGTTATGATTTCGTTGAATCATTCATACCTCA
GGAAAGTAAAGATTTCTTTGAAAGAACTGTAAATTCCGTTAAAGAGGTTTTAAAAAGTATATTTTATGGACATTTTTTAA
CTTCTTTAATTATTGGTATTATTGCGACTGTTGGATATTCTTTACTTGGATATTCTCAGGGAGTATTTTTAGGAGTGCTT
ACCGGTATTTTTCAGTTAATTCCAATATTTGGACCTTGGCCAATTTATTGGACCTTGGCTATTGTTGATTTGATTTCAGG
AAATTATGTAAGGGTTGTAATTGTAATTTTATTTGGATTTTTCCTTAGTTTAAGTGATATGTATATTAGGCCAGCATTAT
CCAGTCATTATGCAGATATCCATCCTTTAATTTTACTTATAGGGTTTTTGGCAGGTCCATTAGTTTACGGAATTGTAGGG
TTTATTTTAGGTCCATTAATACTGGGTATAACTTATGCTGTTTTAGATAACTTTAGAATAGAACTTAATAAAAGCAAAGG
GGAATAA

Upstream 100 bases:

>100_bases
AGGGCCTGTTTTTAAAAATGAGAAAATAGAAGAAATTTCAGAGTTCGGTAAATACAGAAGGAATGCTGCAGGAATAAAGC
AGTAATTAAATGTGATTCTA

Downstream 100 bases:

>100_bases
ACAATGGAAAAAAACGTTGTTATTTTAGATATTGACTATGTTACTTATGAAAACAAGCCTGTAATCCGTTTATTTTCAAA
AGATAAGGATAAAAACATTG

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MEKDLKEYITPPVLLVLFLLGISLMIVSPVLNMVILGAILAYAIRPLARKITSKIKIRSVSIFLAVILVMIPLVILIAYI
ISVISGVLSDVLVVNPSGFNLNLDTVINQMVNSLPADISSGIDTASIKSSLSGFIKDIGNVVLDYIVSLASKLLSISVDL
FILFASIYYFIRDGDNCYDFVESFIPQESKDFFERTVNSVKEVLKSIFYGHFLTSLIIGIIATVGYSLLGYSQGVFLGVL
TGIFQLIPIFGPWPIYWTLAIVDLISGNYVRVVIVILFGFFLSLSDMYIRPALSSHYADIHPLILLIGFLAGPLVYGIVG
FILGPLILGITYAVLDNFRIELNKSKGE

Sequences:

>Translated_348_residues
MEKDLKEYITPPVLLVLFLLGISLMIVSPVLNMVILGAILAYAIRPLARKITSKIKIRSVSIFLAVILVMIPLVILIAYI
ISVISGVLSDVLVVNPSGFNLNLDTVINQMVNSLPADISSGIDTASIKSSLSGFIKDIGNVVLDYIVSLASKLLSISVDL
FILFASIYYFIRDGDNCYDFVESFIPQESKDFFERTVNSVKEVLKSIFYGHFLTSLIIGIIATVGYSLLGYSQGVFLGVL
TGIFQLIPIFGPWPIYWTLAIVDLISGNYVRVVIVILFGFFLSLSDMYIRPALSSHYADIHPLILLIGFLAGPLVYGIVG
FILGPLILGITYAVLDNFRIELNKSKGE
>Mature_348_residues
MEKDLKEYITPPVLLVLFLLGISLMIVSPVLNMVILGAILAYAIRPLARKITSKIKIRSVSIFLAVILVMIPLVILIAYI
ISVISGVLSDVLVVNPSGFNLNLDTVINQMVNSLPADISSGIDTASIKSSLSGFIKDIGNVVLDYIVSLASKLLSISVDL
FILFASIYYFIRDGDNCYDFVESFIPQESKDFFERTVNSVKEVLKSIFYGHFLTSLIIGIIATVGYSLLGYSQGVFLGVL
TGIFQLIPIFGPWPIYWTLAIVDLISGNYVRVVIVILFGFFLSLSDMYIRPALSSHYADIHPLILLIGFLAGPLVYGIVG
FILGPLILGITYAVLDNFRIELNKSKGE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38217; Mature: 38217

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKDLKEYITPPVLLVLFLLGISLMIVSPVLNMVILGAILAYAIRPLARKITSKIKIRSV
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIFLAVILVMIPLVILIAYIISVISGVLSDVLVVNPSGFNLNLDTVINQMVNSLPADISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCHHHHC
GIDTASIKSSLSGFIKDIGNVVLDYIVSLASKLLSISVDLFILFASIYYFIRDGDNCYDF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VESFIPQESKDFFERTVNSVKEVLKSIFYGHFLTSLIIGIIATVGYSLLGYSQGVFLGVL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
TGIFQLIPIFGPWPIYWTLAIVDLISGNYVRVVIVILFGFFLSLSDMYIRPALSSHYADI
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPLILLIGFLAGPLVYGIVGFILGPLILGITYAVLDNFRIELNKSKGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure
MEKDLKEYITPPVLLVLFLLGISLMIVSPVLNMVILGAILAYAIRPLARKITSKIKIRSV
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIFLAVILVMIPLVILIAYIISVISGVLSDVLVVNPSGFNLNLDTVINQMVNSLPADISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCHHHHC
GIDTASIKSSLSGFIKDIGNVVLDYIVSLASKLLSISVDLFILFASIYYFIRDGDNCYDF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VESFIPQESKDFFERTVNSVKEVLKSIFYGHFLTSLIIGIIATVGYSLLGYSQGVFLGVL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
TGIFQLIPIFGPWPIYWTLAIVDLISGNYVRVVIVILFGFFLSLSDMYIRPALSSHYADI
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPLILLIGFLAGPLVYGIVGFILGPLILGITYAVLDNFRIELNKSKGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]