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The map label for this gene is yurY [H]

Identifier: 148643063

GI number: 148643063

Start: 968816

End: 969574

Strand: Reverse

Name: yurY [H]

Synonym: Msm_1003

Alternate gene names: 148643063

Gene position: 969574-968816 (Counterclockwise)

Preceding gene: 148643064

Following gene: 148643062

Centisome position: 52.32

GC content: 33.99

Gene sequence:

>759_bases
ATGTTACTTGAAATTGAAAATTTGGCTGTGGAAGTGGCCGGTAAAAGAGTTCTGAAAGATATTAATCTTTCAATTGATGA
GGGGGAGACTCATGTTCTTTTAGGTCCGAATGGTGCCGGTAAAAGTACATTGTTTTTAACAATTCTTGGTTTTCCACAAT
ATAATGTAGTTAATGGATCAATTAAATTTAAAGGTGAAGATATTACTAATTTAACTACAGCTGAACGTGTCCAATTAGGA
ATTGGAGTAAGCTTCCAATCTCCACCGTCTATTCGTGGAGTATCAGTTCGTGATTTACTTAAAATAGAATCCCATCAAGA
AATTAATGAACCGTTAAATGCCAGAATGTTGGAATTGGCTCAAAAACTTAAATTCAATGATGAATTTTTAGACAGGGATG
TTAATTTCGGATTTTCCGGAGGAGAAATTAAACGTTCTGAAATTTTACAATTACTCGCTCAAATGCCTGATTTCACCATG
TTTGATGAACCGGATTCTGGTGTGGATATTGAAAATGTGGAATTAATAGCTGGTGAAATTGGTACTTTACTTGATAAGGA
TATAAAGCATGATTCCAGAAAAAGAAGCGGTCTTTTGATTACTCATTTAGGTTATATTTTGAACTTTGTAAGTGCGGATA
AAGCTCATGTTTTAATGGATGGTAAAATAGCTTGTTCAGGTAATCCTGCTGAGATTATTGAGGATATTAGGAAAGAAGGA
TTTAACGGATGTGTTGAATGTGCGCAATGTATTAAATGA

Upstream 100 bases:

>100_bases
AACATTTAGATGTGGGATTTATAATTATAACATATTTATATATCTTAATTTAAATGTAATAATGTTATATAATTTATGTC
TTTTTAAATAAGGTGATAAA

Downstream 100 bases:

>100_bases
TGCCGAAAGAGCTAAAGATAAAAAAGCTCCAATTGGTGTAGATGTTACAATTGAAAATTTTTCAGATGAAATTATAGATG
GAATTGATCTTTTAGATGAT

Product: ABC transporter involved in Fe-S cluster assembly, ATPase component

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MLLEIENLAVEVAGKRVLKDINLSIDEGETHVLLGPNGAGKSTLFLTILGFPQYNVVNGSIKFKGEDITNLTTAERVQLG
IGVSFQSPPSIRGVSVRDLLKIESHQEINEPLNARMLELAQKLKFNDEFLDRDVNFGFSGGEIKRSEILQLLAQMPDFTM
FDEPDSGVDIENVELIAGEIGTLLDKDIKHDSRKRSGLLITHLGYILNFVSADKAHVLMDGKIACSGNPAEIIEDIRKEG
FNGCVECAQCIK

Sequences:

>Translated_252_residues
MLLEIENLAVEVAGKRVLKDINLSIDEGETHVLLGPNGAGKSTLFLTILGFPQYNVVNGSIKFKGEDITNLTTAERVQLG
IGVSFQSPPSIRGVSVRDLLKIESHQEINEPLNARMLELAQKLKFNDEFLDRDVNFGFSGGEIKRSEILQLLAQMPDFTM
FDEPDSGVDIENVELIAGEIGTLLDKDIKHDSRKRSGLLITHLGYILNFVSADKAHVLMDGKIACSGNPAEIIEDIRKEG
FNGCVECAQCIK
>Mature_252_residues
MLLEIENLAVEVAGKRVLKDINLSIDEGETHVLLGPNGAGKSTLFLTILGFPQYNVVNGSIKFKGEDITNLTTAERVQLG
IGVSFQSPPSIRGVSVRDLLKIESHQEINEPLNARMLELAQKLKFNDEFLDRDVNFGFSGGEIKRSEILQLLAQMPDFTM
FDEPDSGVDIENVELIAGEIGTLLDKDIKHDSRKRSGLLITHLGYILNFVSADKAHVLMDGKIACSGNPAEIIEDIRKEG
FNGCVECAQCIK

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=254, Percent_Identity=35.8267716535433, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1789593, Length=236, Percent_Identity=32.6271186440678, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1789864, Length=246, Percent_Identity=24.7967479674797, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786563, Length=210, Percent_Identity=32.8571428571429, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790467, Length=221, Percent_Identity=34.3891402714932, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788761, Length=244, Percent_Identity=26.6393442622951, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787759, Length=268, Percent_Identity=27.9850746268657, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790739, Length=246, Percent_Identity=26.4227642276423, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788165, Length=234, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786698, Length=171, Percent_Identity=28.0701754385965, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI48995001, Length=230, Percent_Identity=27.8260869565217, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI87081791, Length=249, Percent_Identity=26.9076305220884, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1787792, Length=238, Percent_Identity=26.4705882352941, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI87081709, Length=239, Percent_Identity=25.9414225941423, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789891, Length=165, Percent_Identity=27.8787878787879, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=227, Percent_Identity=25.5506607929515, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27710; Mature: 27710

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLEIENLAVEVAGKRVLKDINLSIDEGETHVLLGPNGAGKSTLFLTILGFPQYNVVNGS
CEEEHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCEEEEEEECCCCEEEEECE
IKFKGEDITNLTTAERVQLGIGVSFQSPPSIRGVSVRDLLKIESHQEINEPLNARMLELA
EEECCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
QKLKFNDEFLDRDVNFGFSGGEIKRSEILQLLAQMPDFTMFDEPDSGVDIENVELIAGEI
HHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHEEEHHHH
GTLLDKDIKHDSRKRSGLLITHLGYILNFVSADKAHVLMDGKIACSGNPAEIIEDIRKEG
HHHHHHHHHHCHHHHCCCHHHHHHHHHHHHCCCCEEEEECCEEEECCCHHHHHHHHHHCC
FNGCVECAQCIK
CHHHHHHHHHCC
>Mature Secondary Structure
MLLEIENLAVEVAGKRVLKDINLSIDEGETHVLLGPNGAGKSTLFLTILGFPQYNVVNGS
CEEEHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCEEEEEEECCCCEEEEECE
IKFKGEDITNLTTAERVQLGIGVSFQSPPSIRGVSVRDLLKIESHQEINEPLNARMLELA
EEECCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
QKLKFNDEFLDRDVNFGFSGGEIKRSEILQLLAQMPDFTMFDEPDSGVDIENVELIAGEI
HHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHEEEHHHH
GTLLDKDIKHDSRKRSGLLITHLGYILNFVSADKAHVLMDGKIACSGNPAEIIEDIRKEG
HHHHHHHHHHCHHHHCCCHHHHHHHHHHHHCCCCEEEEECCEEEECCCHHHHHHHHHHCC
FNGCVECAQCIK
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]