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The map label for this gene is opuCC [H]

Identifier: 148643051

GI number: 148643051

Start: 951595

End: 953139

Strand: Reverse

Name: opuCC [H]

Synonym: Msm_0991

Alternate gene names: 148643051

Gene position: 953139-951595 (Counterclockwise)

Preceding gene: 148643054

Following gene: 148643050

Centisome position: 51.43

GC content: 32.82

Gene sequence:

>1545_bases
ATGTTATCTGAAACATGGTCATTAATTGTTAATCAAAGTGATTTTTTTACGGATTTAATGATTCAGCATTTGGAAATTTC
TTTAATTTCTGTTGTTTTTGCAATAATTATTGGATTGGGTTTGGGTATTTTTATAAGTGAGTATCCGAAAAATAAATGGG
TTTTGGCAATTGTTAATCTTATTTATACAATTCCATCAATAGCATTATTCGGGTTTTTAATTCCAGTTTCCGGAGTGGGC
AATACCAGTGCAGTTATAGCTTTAACCATTTATGGTTTGCTGCCTATGGTTAGGAATACTTACACTGGAATTCGAACTAT
TGATGACAGGATTATTGAAGCTGCAAAGGGAATGGGCAGTACTGATTTGCAAATTTTATTAAAAATTAAATTGCCATTGG
CTTTACCTCATATTATGTCTGCAATTCGTAATATGGCAGTTATGACAATTGCTTTAGCAGGTATTGCATCATTTATTGGT
GCCGGAGGTTTGGGGGTAGCTATTTACAGGGGTATTACTACAAATAATATGCCTTTGATTGTTGCAGGAAGTGTACTGAT
TTCTGTTTTAGCAATATGTATTGATTTGATATTGGGATACTTTGAAAAAATATCTGCTCCAGGTGCAAAAAGGCCAAAAT
TCTTAAAATATTTTAAAAATAAGAAAGTATGGGCTTGCATAATTATTGTTTGTATTCTTATTGGGGGATATGTTGCATAT
GAGCAAAACCCTGCAAATACAATTCATATTGCAAGCAAATCATATACTGAAGAATACATTACAGGAGAACTTTTAAAACA
GGTTATTGAAGCACACACAGATTTAAATGTGGAACTTACTTCTGGAGTAGCTGGTGGATCAGGTACAATTCACAGGGGTA
TGGAATCTGGGGATTTTGATTTGTATCCTGAATATACTGGAGTAGCCTGGTTAAGTATTTTGCATAAAAACAGCACTTAT
GATGAAACACAGTTTGATGATTTAAATTCATATTATGAAGATAACTACAATATGACCTGGTATAATAAGTACGGTTTTGA
AGATACTTATGGAATCGGAGTTACAAAAGAAGTTGCAGATAAATATAATTTAAAGACTTACTCTGATTTGGCTAAAGTTT
CTAACCAATTGTCATTTGGAGCAGAATCTGATTTTTTTGCACGTGAAGACGGTTATGATGCAATCTGTGATGATTATGGG
ATGAACTTTAAAGATACAATGGATTTGGATGTAAGCATTAAATATGATGCAGTTAAACAGGGTCAGGTTGACGTGATTGA
TGTTTATACAACAGATGGGCGCTTGGAAAACTCCAATATTGTAGTTCTGGAAGACGATAAGGATTTCTATCCTTCTTATT
ATGCAGGAACAGTAATAAATCAGCAAACTTTAATAGATCATCCTGAAGTAGCTGATGCACTTGATTATTTGACTGGAAAT
ATTTCAACTGAAGATATGAAACATATGAATTATGAAGTTGATATTGAAGGAAAAGACCCTTCAGATGTAGCACATGACTT
TTTAGTAAGTAAACATTTAATATGA

Upstream 100 bases:

>100_bases
AATTTTCAATATTTCTTTTATAATCCTTGAAATTATATAATGAAATAAATAACTATTTATTCAATTGTGATTATATTGTG
GAAAATTATGGGTGAAATAA

Downstream 100 bases:

>100_bases
GGTGATTATATGAGTTCAATCATTGAATTTAAAGATATAAGTAAACATTATTCTGATAGTGATTTTTCAATAGATAATTT
CAATTTAAGTGTTGAAAAAG

Product: nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding component

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MLSETWSLIVNQSDFFTDLMIQHLEISLISVVFAIIIGLGLGIFISEYPKNKWVLAIVNLIYTIPSIALFGFLIPVSGVG
NTSAVIALTIYGLLPMVRNTYTGIRTIDDRIIEAAKGMGSTDLQILLKIKLPLALPHIMSAIRNMAVMTIALAGIASFIG
AGGLGVAIYRGITTNNMPLIVAGSVLISVLAICIDLILGYFEKISAPGAKRPKFLKYFKNKKVWACIIIVCILIGGYVAY
EQNPANTIHIASKSYTEEYITGELLKQVIEAHTDLNVELTSGVAGGSGTIHRGMESGDFDLYPEYTGVAWLSILHKNSTY
DETQFDDLNSYYEDNYNMTWYNKYGFEDTYGIGVTKEVADKYNLKTYSDLAKVSNQLSFGAESDFFAREDGYDAICDDYG
MNFKDTMDLDVSIKYDAVKQGQVDVIDVYTTDGRLENSNIVVLEDDKDFYPSYYAGTVINQQTLIDHPEVADALDYLTGN
ISTEDMKHMNYEVDIEGKDPSDVAHDFLVSKHLI

Sequences:

>Translated_514_residues
MLSETWSLIVNQSDFFTDLMIQHLEISLISVVFAIIIGLGLGIFISEYPKNKWVLAIVNLIYTIPSIALFGFLIPVSGVG
NTSAVIALTIYGLLPMVRNTYTGIRTIDDRIIEAAKGMGSTDLQILLKIKLPLALPHIMSAIRNMAVMTIALAGIASFIG
AGGLGVAIYRGITTNNMPLIVAGSVLISVLAICIDLILGYFEKISAPGAKRPKFLKYFKNKKVWACIIIVCILIGGYVAY
EQNPANTIHIASKSYTEEYITGELLKQVIEAHTDLNVELTSGVAGGSGTIHRGMESGDFDLYPEYTGVAWLSILHKNSTY
DETQFDDLNSYYEDNYNMTWYNKYGFEDTYGIGVTKEVADKYNLKTYSDLAKVSNQLSFGAESDFFAREDGYDAICDDYG
MNFKDTMDLDVSIKYDAVKQGQVDVIDVYTTDGRLENSNIVVLEDDKDFYPSYYAGTVINQQTLIDHPEVADALDYLTGN
ISTEDMKHMNYEVDIEGKDPSDVAHDFLVSKHLI
>Mature_514_residues
MLSETWSLIVNQSDFFTDLMIQHLEISLISVVFAIIIGLGLGIFISEYPKNKWVLAIVNLIYTIPSIALFGFLIPVSGVG
NTSAVIALTIYGLLPMVRNTYTGIRTIDDRIIEAAKGMGSTDLQILLKIKLPLALPHIMSAIRNMAVMTIALAGIASFIG
AGGLGVAIYRGITTNNMPLIVAGSVLISVLAICIDLILGYFEKISAPGAKRPKFLKYFKNKKVWACIIIVCILIGGYVAY
EQNPANTIHIASKSYTEEYITGELLKQVIEAHTDLNVELTSGVAGGSGTIHRGMESGDFDLYPEYTGVAWLSILHKNSTY
DETQFDDLNSYYEDNYNMTWYNKYGFEDTYGIGVTKEVADKYNLKTYSDLAKVSNQLSFGAESDFFAREDGYDAICDDYG
MNFKDTMDLDVSIKYDAVKQGQVDVIDVYTTDGRLENSNIVVLEDDKDFYPSYYAGTVINQQTLIDHPEVADALDYLTGN
ISTEDMKHMNYEVDIEGKDPSDVAHDFLVSKHLI

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788451, Length=202, Percent_Identity=35.1485148514851, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1788449, Length=199, Percent_Identity=35.678391959799, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1788452, Length=304, Percent_Identity=25, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1789033, Length=167, Percent_Identity=35.9281437125749, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 56917; Mature: 56917

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSETWSLIVNQSDFFTDLMIQHLEISLISVVFAIIIGLGLGIFISEYPKNKWVLAIVNL
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IYTIPSIALFGFLIPVSGVGNTSAVIALTIYGLLPMVRNTYTGIRTIDDRIIEAAKGMGS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
TDLQILLKIKLPLALPHIMSAIRNMAVMTIALAGIASFIGAGGLGVAIYRGITTNNMPLI
CCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEE
VAGSVLISVLAICIDLILGYFEKISAPGAKRPKFLKYFKNKKVWACIIIVCILIGGYVAY
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCEEEE
EQNPANTIHIASKSYTEEYITGELLKQVIEAHTDLNVELTSGVAGGSGTIHRGMESGDFD
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCCCCCCC
LYPEYTGVAWLSILHKNSTYDETQFDDLNSYYEDNYNMTWYNKYGFEDTYGIGVTKEVAD
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHH
KYNLKTYSDLAKVSNQLSFGAESDFFAREDGYDAICDDYGMNFKDTMDLDVSIKYDAVKQ
HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCC
GQVDVIDVYTTDGRLENSNIVVLEDDKDFYPSYYAGTVINQQTLIDHPEVADALDYLTGN
CCEEEEEEEECCCEECCCCEEEEECCCCCCCCHHHCCEECCHHHCCCCHHHHHHHHHHCC
ISTEDMKHMNYEVDIEGKDPSDVAHDFLVSKHLI
CCHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSETWSLIVNQSDFFTDLMIQHLEISLISVVFAIIIGLGLGIFISEYPKNKWVLAIVNL
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IYTIPSIALFGFLIPVSGVGNTSAVIALTIYGLLPMVRNTYTGIRTIDDRIIEAAKGMGS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
TDLQILLKIKLPLALPHIMSAIRNMAVMTIALAGIASFIGAGGLGVAIYRGITTNNMPLI
CCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEE
VAGSVLISVLAICIDLILGYFEKISAPGAKRPKFLKYFKNKKVWACIIIVCILIGGYVAY
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCEEEE
EQNPANTIHIASKSYTEEYITGELLKQVIEAHTDLNVELTSGVAGGSGTIHRGMESGDFD
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCCCCCCC
LYPEYTGVAWLSILHKNSTYDETQFDDLNSYYEDNYNMTWYNKYGFEDTYGIGVTKEVAD
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHH
KYNLKTYSDLAKVSNQLSFGAESDFFAREDGYDAICDDYGMNFKDTMDLDVSIKYDAVKQ
HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCC
GQVDVIDVYTTDGRLENSNIVVLEDDKDFYPSYYAGTVINQQTLIDHPEVADALDYLTGN
CCEEEEEEEECCCEECCCCEEEEECCCCCCCCHHHCCEECCHHHCCCCHHHHHHHHHHCC
ISTEDMKHMNYEVDIEGKDPSDVAHDFLVSKHLI
CCHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]