| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643054
Identifier: 148643054
GI number: 148643054
Start: 955131
End: 956213
Strand: Reverse
Name: 148643054
Synonym: Msm_0994
Alternate gene names: NA
Gene position: 956213-955131 (Counterclockwise)
Preceding gene: 148643055
Following gene: 148643051
Centisome position: 51.6
GC content: 30.84
Gene sequence:
>1083_bases ATGTCATTAACTGAAGATATTCTTAGGCGTGATGAGGAATTATTTTTCAATGATTTGAATATAACTTCCGAAACTTTGGA CAACAATTCTGAAACGAAATTGGTTGCTGACTTTACTGAGTATAATCCTTTACATAATGGTCATTTTCATTGCATGAAAG TTGCAAAGTCACAAGTTCCTGATGCATTATTTGTAGCTATTGTGCCTGGGCTCTTTGAGCGAAGTGGGAGAGGTATTCCA TATATACTTCCACGTGAAATTAGGGCAAAAATAGCCATTTCAGTAGGTGCAGATATTGTTGTTGAAGGTCCGCCTATGGG AATTATGGGCTCCGGCCAGTATTCTCTGTCATTGGCCAAGATGTTTAAAGCTTTAAACACGGATTATATTCCGAGAGGTT ATAAAGAAGTTCCAAATTTTGATTTAATAATGGATAGAATATCTAAAGGCCATTGGGTAGCTCCAAAACCTTATAAAATA ATTGATAAAACAGTTAATGAAGTTCTTCTGAGAGACAAACTTGAAGAGGATAATTATGTTATAGCTTCTTTTTCAAATTC TTTAAGTAAAATCAACTTTGATTATGAAAACAAGTTCATTTTTGTAAAACGGATTGAAGGTGTAAGCGGAACTCTGATTA GGCAGTCTATTGTTGAAAATAACTTTGATAAAGTTAAGGATATGATGCCTGACAAAACAATTGAAGTTTTGAAACATGAA ATAGCTAATGATAATCTAATTTATAATGTCAGAGATGAGGAAGCTATTTTAAATACTGCAAATACTTTTGATTTTGACAC TTTAGCTAGTTTAAACATGTTTAATGAAAGATTGGCCAACACTATTTTCAATAATGCTCCTTTTGATAATGTTGATGAAG TTCAAAAAGTCATTGGAAGAGGTTTTTCAACACATTTCAGTGAAAGAATACTAAGCATTTTAGAAGTTCCTATTTCTAAA AAGGTAATTTCAGAATATATTGAAAATTATCCTGCAAAAATTAGAGTGTTGGATTATAAAAACAGTGAAGTTTTAGAAAA ATTTAGAAAAAAAGTAAATAATGAAATTGAATTATTTCATTAA
Upstream 100 bases:
>100_bases AATAGCTTAAAGGGGATTTAATTAAATCTCATTTTTCTTTCTTTTTTTTTAAAATTATAAATCATAAAATTTTTTTAATT TAACTTTCATATTATAAATC
Downstream 100 bases:
>100_bases ATTACCTATTAATTCTCCAGGGTCTTGAAGACCAAATATAGCATCTAAAAATGTAGGGTAGCTGCTAGTTAAGAATAACA GGTATACAATGTAGAATAAT
Product: nucleotidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSLTEDILRRDEELFFNDLNITSETLDNNSETKLVADFTEYNPLHNGHFHCMKVAKSQVPDALFVAIVPGLFERSGRGIP YILPREIRAKIAISVGADIVVEGPPMGIMGSGQYSLSLAKMFKALNTDYIPRGYKEVPNFDLIMDRISKGHWVAPKPYKI IDKTVNEVLLRDKLEEDNYVIASFSNSLSKINFDYENKFIFVKRIEGVSGTLIRQSIVENNFDKVKDMMPDKTIEVLKHE IANDNLIYNVRDEEAILNTANTFDFDTLASLNMFNERLANTIFNNAPFDNVDEVQKVIGRGFSTHFSERILSILEVPISK KVISEYIENYPAKIRVLDYKNSEVLEKFRKKVNNEIELFH
Sequences:
>Translated_360_residues MSLTEDILRRDEELFFNDLNITSETLDNNSETKLVADFTEYNPLHNGHFHCMKVAKSQVPDALFVAIVPGLFERSGRGIP YILPREIRAKIAISVGADIVVEGPPMGIMGSGQYSLSLAKMFKALNTDYIPRGYKEVPNFDLIMDRISKGHWVAPKPYKI IDKTVNEVLLRDKLEEDNYVIASFSNSLSKINFDYENKFIFVKRIEGVSGTLIRQSIVENNFDKVKDMMPDKTIEVLKHE IANDNLIYNVRDEEAILNTANTFDFDTLASLNMFNERLANTIFNNAPFDNVDEVQKVIGRGFSTHFSERILSILEVPISK KVISEYIENYPAKIRVLDYKNSEVLEKFRKKVNNEIELFH >Mature_359_residues SLTEDILRRDEELFFNDLNITSETLDNNSETKLVADFTEYNPLHNGHFHCMKVAKSQVPDALFVAIVPGLFERSGRGIPY ILPREIRAKIAISVGADIVVEGPPMGIMGSGQYSLSLAKMFKALNTDYIPRGYKEVPNFDLIMDRISKGHWVAPKPYKII DKTVNEVLLRDKLEEDNYVIASFSNSLSKINFDYENKFIFVKRIEGVSGTLIRQSIVENNFDKVKDMMPDKTIEVLKHEI ANDNLIYNVRDEEAILNTANTFDFDTLASLNMFNERLANTIFNNAPFDNVDEVQKVIGRGFSTHFSERILSILEVPISKK VISEYIENYPAKIRVLDYKNSEVLEKFRKKVNNEIELFH
Specific function: Unknown
COG id: COG1323
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0348 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR008513 [H]
Pfam domain/function: PF05636 DUF795 [H]
EC number: NA
Molecular weight: Translated: 41261; Mature: 41129
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTEDILRRDEELFFNDLNITSETLDNNSETKLVADFTEYNPLHNGHFHCMKVAKSQVP CCCHHHHHHCCHHHHHHCCCCCHHHCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHCC DALFVAIVPGLFERSGRGIPYILPREIRAKIAISVGADIVVEGPPMGIMGSGQYSLSLAK HHHHHHHHHHHHHHCCCCCCEECCHHHCEEEEEEECCEEEECCCCCCEEECCCHHHHHHH MFKALNTDYIPRGYKEVPNFDLIMDRISKGHWVAPKPYKIIDKTVNEVLLRDKLEEDNYV HHHHHCCCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE IASFSNSLSKINFDYENKFIFVKRIEGVSGTLIRQSIVENNFDKVKDMMPDKTIEVLKHE EEECCCCHHEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHH IANDNLIYNVRDEEAILNTANTFDFDTLASLNMFNERLANTIFNNAPFDNVDEVQKVIGR HCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC GFSTHFSERILSILEVPISKKVISEYIENYPAKIRVLDYKNSEVLEKFRKKVNNEIELFH CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEECC >Mature Secondary Structure SLTEDILRRDEELFFNDLNITSETLDNNSETKLVADFTEYNPLHNGHFHCMKVAKSQVP CCHHHHHHCCHHHHHHCCCCCHHHCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHCC DALFVAIVPGLFERSGRGIPYILPREIRAKIAISVGADIVVEGPPMGIMGSGQYSLSLAK HHHHHHHHHHHHHHCCCCCCEECCHHHCEEEEEEECCEEEECCCCCCEEECCCHHHHHHH MFKALNTDYIPRGYKEVPNFDLIMDRISKGHWVAPKPYKIIDKTVNEVLLRDKLEEDNYV HHHHHCCCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE IASFSNSLSKINFDYENKFIFVKRIEGVSGTLIRQSIVENNFDKVKDMMPDKTIEVLKHE EEECCCCHHEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHH IANDNLIYNVRDEEAILNTANTFDFDTLASLNMFNERLANTIFNNAPFDNVDEVQKVIGR HCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC GFSTHFSERILSILEVPISKKVISEYIENYPAKIRVLDYKNSEVLEKFRKKVNNEIELFH CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]