| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is ppsA [H]
Identifier: 148643048
GI number: 148643048
Start: 947690
End: 949972
Strand: Reverse
Name: ppsA [H]
Synonym: Msm_0988
Alternate gene names: 148643048
Gene position: 949972-947690 (Counterclockwise)
Preceding gene: 148643049
Following gene: 148643047
Centisome position: 51.26
GC content: 36.71
Gene sequence:
>2283_bases ATGTATGTTGTAAAATTTGAGGATTTAGGCAAATCTGATATTGGAATTGCAGGGGGAAAAGGAGCTAACTTAGGAGAATT GACTCAAGCAGGCATTCCTGTTCCGCCTGGTTTTGTAGTAACTGCCGAAACTTACGGAAAATTCATGGAAGATGCTGGAA TTAATGGTAAGGTATTGGATATTCTTGCTAAAACAGATATCAACAATACTAAAGAACTTCAAGCTGCTGCTGAAGAAATT AAATCCATCATTATTGGAACTCCAGTTCCAGAAGACATGTCCACTTTAATTATTGAAGCTTATAATCAACTTTGCCAAAG AGTTGATGAAGATGATACTGATGTAGCTATTCGTTCTTCAGCTACTGCAGAAGATTTACCTGATGCTTCATTTGCAGGTC AGCAAGACACTTTTTTACATGTTTCAGGTAGTGAAGATGTAATTGATTACATAAGAAAATGTTGGGCATCTTTATTTGAA GCAAGAGCTATTTTTTACAGGGAAGAAAACGGTTTTGATCACTCAAAAGTATACATTGCTGTTGTTGTTCAAAAAATGGC TATTGCAGATAAGGCAGGTGTAATGTTTACTGTAAACCCATCTACCGGTGAAGAAATAGCTTTAATTGAAGGATCATGGG GTCTTGGTGAAGCTGTTGTGTCAGGTGACGTGACTCCTGATAATTATGTTGTAGACAAAAGCAATGATGAAGTTGTAAGT GTCACTATAAGTGATAAAAAATTAATGTATGTAAAAGACGAAGACGGAACCAGTGTAAGAGTAGATGTTCCTGAAGATAA AAGAAACGAAAGAGTTTTATCTGATGAAGAGCTTGTTGAGTTAACTGAAATGGGTAAAAGGATTCAAGCTCATTATGGCG AACCAATGGATACTGAATGGGCTTTTGAAAGAGGCAATTTATTCTTATTACAGGCAAGGCCAATTACTACATTAGGTGAT GACAATGGCGTAGCTGGTGAAGACTCTTCTATCAGTGATAAAAATGTCATTGTTAAAGGTCTTGGAGCAAGTCCAGGTAC TGCTTCAGGTAAAGTCAAAATCATTTTAGACATTGATGAATTGGATAAAATTAAAGATGGAGACATTATGGTTACAACTA TGACTACTCCTGATATGGTTCCAGCTATGAGAAGAGCTAGCGGAATCATTACTGATGAAGGGGGAGTAACTTGTCATGCA TCTATCATTTCCCGTGAACTTGGAATTCCTTGTGTTGTAGGAACTGGTTCAGCTACAACTACATTAAAAGAGAATGTTGG AGTTACTTTAGATGGTAAAAAAGGTTTGGTTTATGAAGGAATTCATGAAAACAAAGAGGAAGCAGTTCAAACAGCTACAT CTAATGTTGAAGCAGCTCCAATCATAACTGTTACTGAAGTAAAAGCTAATGTAAGTATGCCTGAAGCAGCCCAAAGAGCA GCAGCTACTGGTGCAGATGGAGTTGGATTGCTCAGAACTGAACATTTGATGTTGACTGCAGGTATTCACCCTGGAAAATT CATTGCTGATGGAAGGGAAGATGAATTAATCGACACCATTGCAGAAAATGTAATGATTGTGGCAGACGCATTTTATCCAA AACCTGTATGGTACAGAACTTTAGATGCGCCAACTGACGAATTCATCACTTTGGAAGGTGGAGAAAACGAACCTGAAGAA CACAATCCAATGTTAGGTTGGAGAGGAATCAGAAGGGAACTTGACCAACCTGAAATTCTTAAATGTGAATTCAAAGCTAT TAAAAAACTTTATGATAAAGGTTACACCAACTTAGGAATCATGATTCCATTATCACAAAGTCCTGCTGAACTTAAACAAG CAAAAGAACTTTGTGCTAGTGTAGGTTTAATCCCTCATAAAGACATTGACTTTGGTATGATGGTAGAAATACCTGCAGCT GCTTTAACTATTGAAGATTATCTTGAAATTGGTGTTGATTTCGTAAGTTTAGGAACTAATGATTTAACACAATATACTCT TGCAGTAGACAGAAACAACGAATTTGTTGCAAAACATTATACTGAAGAACACCCTGCTGTAATGAAATTAATTGAAAGAA CAATTAAAAAATGTGTTGAAGCTGGAGTTACTTGCAGTATTTGTGGTCAAGCAGGTAGTGTACCTCACATTGTTGAAAAA CTTGTAGGATTTGGAATTACCAGTGTATCCTCAAATGCTGATGCTGTAGCTGAAGTTAGAAAAACTGTAGCTAGAGCTGA GAAAAAAATTATTCTTGATGCTGCTCGCAAATCTCAAGAATAA
Upstream 100 bases:
>100_bases TTTATACATTAAATATAATATTGGCGATGTTTTTTATTTATTGAGAACATGCTGTCAAGTATTAATATTAATTCATTTTA AACCAAAGAGGTTATAATTC
Downstream 100 bases:
>100_bases ATTTTATTTTCTTTTTTATTTTTTTTAAATATCACCTTATAAGGTTGTACTATGGAAGATAAACCAATATCTAAAAAAGA CATACTTAAAGAATTAAATG
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 760; Mature: 760
Protein sequence:
>760_residues MYVVKFEDLGKSDIGIAGGKGANLGELTQAGIPVPPGFVVTAETYGKFMEDAGINGKVLDILAKTDINNTKELQAAAEEI KSIIIGTPVPEDMSTLIIEAYNQLCQRVDEDDTDVAIRSSATAEDLPDASFAGQQDTFLHVSGSEDVIDYIRKCWASLFE ARAIFYREENGFDHSKVYIAVVVQKMAIADKAGVMFTVNPSTGEEIALIEGSWGLGEAVVSGDVTPDNYVVDKSNDEVVS VTISDKKLMYVKDEDGTSVRVDVPEDKRNERVLSDEELVELTEMGKRIQAHYGEPMDTEWAFERGNLFLLQARPITTLGD DNGVAGEDSSISDKNVIVKGLGASPGTASGKVKIILDIDELDKIKDGDIMVTTMTTPDMVPAMRRASGIITDEGGVTCHA SIISRELGIPCVVGTGSATTTLKENVGVTLDGKKGLVYEGIHENKEEAVQTATSNVEAAPIITVTEVKANVSMPEAAQRA AATGADGVGLLRTEHLMLTAGIHPGKFIADGREDELIDTIAENVMIVADAFYPKPVWYRTLDAPTDEFITLEGGENEPEE HNPMLGWRGIRRELDQPEILKCEFKAIKKLYDKGYTNLGIMIPLSQSPAELKQAKELCASVGLIPHKDIDFGMMVEIPAA ALTIEDYLEIGVDFVSLGTNDLTQYTLAVDRNNEFVAKHYTEEHPAVMKLIERTIKKCVEAGVTCSICGQAGSVPHIVEK LVGFGITSVSSNADAVAEVRKTVARAEKKIILDAARKSQE
Sequences:
>Translated_760_residues MYVVKFEDLGKSDIGIAGGKGANLGELTQAGIPVPPGFVVTAETYGKFMEDAGINGKVLDILAKTDINNTKELQAAAEEI KSIIIGTPVPEDMSTLIIEAYNQLCQRVDEDDTDVAIRSSATAEDLPDASFAGQQDTFLHVSGSEDVIDYIRKCWASLFE ARAIFYREENGFDHSKVYIAVVVQKMAIADKAGVMFTVNPSTGEEIALIEGSWGLGEAVVSGDVTPDNYVVDKSNDEVVS VTISDKKLMYVKDEDGTSVRVDVPEDKRNERVLSDEELVELTEMGKRIQAHYGEPMDTEWAFERGNLFLLQARPITTLGD DNGVAGEDSSISDKNVIVKGLGASPGTASGKVKIILDIDELDKIKDGDIMVTTMTTPDMVPAMRRASGIITDEGGVTCHA SIISRELGIPCVVGTGSATTTLKENVGVTLDGKKGLVYEGIHENKEEAVQTATSNVEAAPIITVTEVKANVSMPEAAQRA AATGADGVGLLRTEHLMLTAGIHPGKFIADGREDELIDTIAENVMIVADAFYPKPVWYRTLDAPTDEFITLEGGENEPEE HNPMLGWRGIRRELDQPEILKCEFKAIKKLYDKGYTNLGIMIPLSQSPAELKQAKELCASVGLIPHKDIDFGMMVEIPAA ALTIEDYLEIGVDFVSLGTNDLTQYTLAVDRNNEFVAKHYTEEHPAVMKLIERTIKKCVEAGVTCSICGQAGSVPHIVEK LVGFGITSVSSNADAVAEVRKTVARAEKKIILDAARKSQE >Mature_760_residues MYVVKFEDLGKSDIGIAGGKGANLGELTQAGIPVPPGFVVTAETYGKFMEDAGINGKVLDILAKTDINNTKELQAAAEEI KSIIIGTPVPEDMSTLIIEAYNQLCQRVDEDDTDVAIRSSATAEDLPDASFAGQQDTFLHVSGSEDVIDYIRKCWASLFE ARAIFYREENGFDHSKVYIAVVVQKMAIADKAGVMFTVNPSTGEEIALIEGSWGLGEAVVSGDVTPDNYVVDKSNDEVVS VTISDKKLMYVKDEDGTSVRVDVPEDKRNERVLSDEELVELTEMGKRIQAHYGEPMDTEWAFERGNLFLLQARPITTLGD DNGVAGEDSSISDKNVIVKGLGASPGTASGKVKIILDIDELDKIKDGDIMVTTMTTPDMVPAMRRASGIITDEGGVTCHA SIISRELGIPCVVGTGSATTTLKENVGVTLDGKKGLVYEGIHENKEEAVQTATSNVEAAPIITVTEVKANVSMPEAAQRA AATGADGVGLLRTEHLMLTAGIHPGKFIADGREDELIDTIAENVMIVADAFYPKPVWYRTLDAPTDEFITLEGGENEPEE HNPMLGWRGIRRELDQPEILKCEFKAIKKLYDKGYTNLGIMIPLSQSPAELKQAKELCASVGLIPHKDIDFGMMVEIPAA ALTIEDYLEIGVDFVSLGTNDLTQYTLAVDRNNEFVAKHYTEEHPAVMKLIERTIKKCVEAGVTCSICGQAGSVPHIVEK LVGFGITSVSSNADAVAEVRKTVARAEKKIILDAARKSQE
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=795, Percent_Identity=37.7358490566038, Blast_Score=461, Evalue=1e-130, Organism=Escherichia coli, GI1788756, Length=411, Percent_Identity=34.0632603406326, Blast_Score=182, Evalue=5e-47, Organism=Escherichia coli, GI1789193, Length=400, Percent_Identity=30.75, Blast_Score=154, Evalue=2e-38, Organism=Escherichia coli, GI48994992, Length=348, Percent_Identity=29.5977011494253, Blast_Score=134, Evalue=3e-32, Organism=Escherichia coli, GI1788726, Length=416, Percent_Identity=25, Blast_Score=120, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17564524, Length=324, Percent_Identity=31.1728395061728, Blast_Score=110, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 82153; Mature: 82153
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVVKFEDLGKSDIGIAGGKGANLGELTQAGIPVPPGFVVTAETYGKFMEDAGINGKVLD CEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCEEEE ILAKTDINNTKELQAAAEEIKSIIIGTPVPEDMSTLIIEAYNQLCQRVDEDDTDVAIRSS EEEECCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECC ATAEDLPDASFAGQQDTFLHVSGSEDVIDYIRKCWASLFEARAIFYREENGFDHSKVYIA CCHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHEEHH VVVQKMAIADKAGVMFTVNPSTGEEIALIEGSWGLGEAVVSGDVTPDNYVVDKSNDEVVS HHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCHHEECCCCCCCEEEECCCCCEEE VTISDKKLMYVKDEDGTSVRVDVPEDKRNERVLSDEELVELTEMGKRIQAHYGEPMDTEW EEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC AFERGNLFLLQARPITTLGDDNGVAGEDSSISDKNVIVKGLGASPGTASGKVKIILDIDE EEECCCEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECHH LDKIKDGDIMVTTMTTPDMVPAMRRASGIITDEGGVTCHASIISRELGIPCVVGTGSATT HCCCCCCCEEEEEECCCHHHHHHHHHCCCEECCCCCEEEHHHHHHHCCCEEEEECCCCCE TLKENVGVTLDGKKGLVYEGIHENKEEAVQTATSNVEAAPIITVTEVKANVSMPEAAQRA EECCCCCEEEECCCCCEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHH AATGADGVGLLRTEHLMLTAGIHPGKFIADGREDELIDTIAENVMIVADAFYPKPVWYRT HCCCCCCCEEEEECEEEEEECCCCCCEECCCCCHHHHHHHHCCEEEEEECCCCCCCEEEE LDAPTDEFITLEGGENEPEEHNPMLGWRGIRRELDQPEILKCEFKAIKKLYDKGYTNLGI CCCCCCCEEEEECCCCCCHHCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCEEE MIPLSQSPAELKQAKELCASVGLIPHKDIDFGMMVEIPAAALTIEDYLEIGVDFVSLGTN EEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCEEEECCCC DLTQYTLAVDRNNEFVAKHYTEEHPAVMKLIERTIKKCVEAGVTCSICGQAGSVPHIVEK CCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHH LVGFGITSVSSNADAVAEVRKTVARAEKKIILDAARKSQE HHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYVVKFEDLGKSDIGIAGGKGANLGELTQAGIPVPPGFVVTAETYGKFMEDAGINGKVLD CEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCEEEE ILAKTDINNTKELQAAAEEIKSIIIGTPVPEDMSTLIIEAYNQLCQRVDEDDTDVAIRSS EEEECCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECC ATAEDLPDASFAGQQDTFLHVSGSEDVIDYIRKCWASLFEARAIFYREENGFDHSKVYIA CCHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHEEHH VVVQKMAIADKAGVMFTVNPSTGEEIALIEGSWGLGEAVVSGDVTPDNYVVDKSNDEVVS HHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCHHEECCCCCCCEEEECCCCCEEE VTISDKKLMYVKDEDGTSVRVDVPEDKRNERVLSDEELVELTEMGKRIQAHYGEPMDTEW EEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC AFERGNLFLLQARPITTLGDDNGVAGEDSSISDKNVIVKGLGASPGTASGKVKIILDIDE EEECCCEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECHH LDKIKDGDIMVTTMTTPDMVPAMRRASGIITDEGGVTCHASIISRELGIPCVVGTGSATT HCCCCCCCEEEEEECCCHHHHHHHHHCCCEECCCCCEEEHHHHHHHCCCEEEEECCCCCE TLKENVGVTLDGKKGLVYEGIHENKEEAVQTATSNVEAAPIITVTEVKANVSMPEAAQRA EECCCCCEEEECCCCCEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHH AATGADGVGLLRTEHLMLTAGIHPGKFIADGREDELIDTIAENVMIVADAFYPKPVWYRT HCCCCCCCEEEEECEEEEEECCCCCCEECCCCCHHHHHHHHCCEEEEEECCCCCCCEEEE LDAPTDEFITLEGGENEPEEHNPMLGWRGIRRELDQPEILKCEFKAIKKLYDKGYTNLGI CCCCCCCEEEEECCCCCCHHCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCEEE MIPLSQSPAELKQAKELCASVGLIPHKDIDFGMMVEIPAAALTIEDYLEIGVDFVSLGTN EEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCEEEECCCC DLTQYTLAVDRNNEFVAKHYTEEHPAVMKLIERTIKKCVEAGVTCSICGQAGSVPHIVEK CCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHH LVGFGITSVSSNADAVAEVRKTVARAEKKIILDAARKSQE HHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]