| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643041
Identifier: 148643041
GI number: 148643041
Start: 941366
End: 942001
Strand: Reverse
Name: 148643041
Synonym: Msm_0981
Alternate gene names: NA
Gene position: 942001-941366 (Counterclockwise)
Preceding gene: 148643046
Following gene: 148643040
Centisome position: 50.83
GC content: 28.93
Gene sequence:
>636_bases ATGATAGAGGATATACAAGCACTTAGACAAGCTGCACGGTTAACACCGGATAATGAAAACCAAGATGAAAAAGTTTGGTG TATAGCTGCAGGAAATGTTAATTTAATAGATGACATAGCCTATAAAGCAATTGCTTCTAAGCATTCTGTAAAAATTCTAT TTAGGGAGCATGTTATATTAAAGGATAAACGATTGAATAAAAAATTTGATTTTATCATGTTATATGGTAATTCAAGGAAA ATTAATCAATTTAAAAGACTTTGTAATCAGAGAGGTGGGGCTTTTATACAAATAACTCGCCATTATTTAACTGAAGAACC TAATTTAATGGTTTTAGTTGCTCCGGAGGACATGATTAAAAATCTTGTTTATGTTCTTGAGAAATCTAAAGTTTCATTTG CAATTTTACAGGAATCTCAAACTACAGGTTTTATTGATGTTGATATAAATTCTAATGTTAAACTACCAAATTTTATTAAA TCTGCTTTAAAGCCATTATATAATATAAGCGATGTTGTATTATCAACAATTCTGATTTCAGTTGAAAAAGATGAGGATAT TGAAAAAGTCCAGAGTATAGCTACATCTAATAGGATATTTGTCATTGATTTTAAAGATATTGTAACGGAGGATTAG
Upstream 100 bases:
>100_bases TAATGGGTAATTATTAATTGTTAAACTTTAATAAATTCAATTACTTTGTTGTAATTTATTTTAAGTTGAAGTAAAATATT AATATAATGCGAGTAGTTAA
Downstream 100 bases:
>100_bases TCATGAATATTTTTGGAAATGAAGAAGAGGAATCACAAGTTAATGATACTAGAATCATTAGTAACAGCTTGGGAATAGAT TTAGGAACTTTAAACACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MIEDIQALRQAARLTPDNENQDEKVWCIAAGNVNLIDDIAYKAIASKHSVKILFREHVILKDKRLNKKFDFIMLYGNSRK INQFKRLCNQRGGAFIQITRHYLTEEPNLMVLVAPEDMIKNLVYVLEKSKVSFAILQESQTTGFIDVDINSNVKLPNFIK SALKPLYNISDVVLSTILISVEKDEDIEKVQSIATSNRIFVIDFKDIVTED
Sequences:
>Translated_211_residues MIEDIQALRQAARLTPDNENQDEKVWCIAAGNVNLIDDIAYKAIASKHSVKILFREHVILKDKRLNKKFDFIMLYGNSRK INQFKRLCNQRGGAFIQITRHYLTEEPNLMVLVAPEDMIKNLVYVLEKSKVSFAILQESQTTGFIDVDINSNVKLPNFIK SALKPLYNISDVVLSTILISVEKDEDIEKVQSIATSNRIFVIDFKDIVTED >Mature_211_residues MIEDIQALRQAARLTPDNENQDEKVWCIAAGNVNLIDDIAYKAIASKHSVKILFREHVILKDKRLNKKFDFIMLYGNSRK INQFKRLCNQRGGAFIQITRHYLTEEPNLMVLVAPEDMIKNLVYVLEKSKVSFAILQESQTTGFIDVDINSNVKLPNFIK SALKPLYNISDVVLSTILISVEKDEDIEKVQSIATSNRIFVIDFKDIVTED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24160; Mature: 24160
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEDIQALRQAARLTPDNENQDEKVWCIAAGNVNLIDDIAYKAIASKHSVKILFREHVIL CCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCEEE KDKRLNKKFDFIMLYGNSRKINQFKRLCNQRGGAFIQITRHYLTEEPNLMVLVAPEDMIK ECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEHHHCCCCCEEEEECCHHHHH NLVYVLEKSKVSFAILQESQTTGFIDVDINSNVKLPNFIKSALKPLYNISDVVLSTILIS HHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHEE VEKDEDIEKVQSIATSNRIFVIDFKDIVTED ECCCCHHHHHHHHHCCCCEEEEEEHHHHCCC >Mature Secondary Structure MIEDIQALRQAARLTPDNENQDEKVWCIAAGNVNLIDDIAYKAIASKHSVKILFREHVIL CCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCEEE KDKRLNKKFDFIMLYGNSRKINQFKRLCNQRGGAFIQITRHYLTEEPNLMVLVAPEDMIK ECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEHHHCCCCCEEEEECCHHHHH NLVYVLEKSKVSFAILQESQTTGFIDVDINSNVKLPNFIKSALKPLYNISDVVLSTILIS HHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHEE VEKDEDIEKVQSIATSNRIFVIDFKDIVTED ECCCCHHHHHHHHHCCCCEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA