| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642944
Identifier: 148642944
GI number: 148642944
Start: 840147
End: 842414
Strand: Reverse
Name: 148642944
Synonym: Msm_0884
Alternate gene names: NA
Gene position: 842414-840147 (Counterclockwise)
Preceding gene: 148642945
Following gene: 148642937
Centisome position: 45.46
GC content: 32.41
Gene sequence:
>2268_bases ATGTTATTTTTCGTGATTATGGGATGCGTTTCTGCAAATGATTTATCAACATTAGGTGAAAATACTACTGTGCCTAATAT TATAATTGTTGGTGATGCACCAGAAGTTCCAGATGTGCCTGACATTCCAGATATTCCGGATTTTCCAGTTGATCCTGATA ATCCGGACATTGATGATCAAAATGATTCTGATACAGTTAATTTGACCATATTTAACATCGATGAATATTTTGTTGACGGT ACTTTGGGGGTTGAGCATTCTAATACCAAATTTGTATTAACTCAAAACTTTGATAATTTAGGTCTTTTAAAAATTGAAGC AAATAATGTAACTATTTTAGGTAATAATTTTACTTTGCAAAATGTTGCATTTTTGATTAATGGTAAAGATGTTACCTTAG CTAATTTCACATTAGTTAATGATTTTGATTTCAAAGATGCTGATGGTGCGGCAATTCTTACATTGGCCAATAATACGCAT ATACGTGATTGTGTTATAAATTATAATGTTCCTCGTGATAGTGAAGGTTACGGCATTTCTGCAGTTGGAAGAAGAATTGC TCCAATTAGTGGTTTGGAAGTTATTAACTGTATAATCAACTTTGAAGGCCATAATTATAAGGCAAATACCTATAATTATG CTTTAAAAGTAAGTAACTGTCCTAATGCATTAATTGCAAATAACAGTATTTATACTCAGCTTCCGTTGAGGGATGTTAAT TTCGGAGCAGTTGGAGCTGATTTAAATTCTAATTATGTGGCAAGTGTAGGTATTGAGTACAGTAATAATTTAACATTTAT CGGAAATATTGTTGCAAGTATTGTTAATAAAAGGCCAGGAAGTCCTTTCCCTACATTGGACGGTATAATTATTGCCGATT CAAATGATTGTCTTGTTAAAAACAATACTTTGTATATGGAAGATTTCTTAACTTTCCCAGGTCTTAATAATTATCTTTAT GGTATTGATGTATGGCGTGTAAATAGTTTGACATTAGATTCTAATAATATAGCTATTTTAACTACTGGCGGAATGTTATC TGCCGGTACTGCATACCCTATACAAATTACCGGACCTTCTAAGAAGATAAATATAACTAATAATGATTTGTATTCAATAT CTAACGGGCCAAACATAGGAATCTATTCACAAAATTATTATGGTGATACACAATTGTATATTGCTCATAATAAGATTAAC GTGACAGGATTGGCAGGTAATGATAGCTGGGCACTTGTTGCAGGTATAGAAGTTCAGGATTCTAACGATACTATTATTAA TAATACAATTGAAGTTCATAGTGTTGCGGAAGTTAAGGACAATGACAATATGTACGGTATAAGTTATTCTCAATCAACTA AAGGTAACCATACATTTGTAATTAAAAATAATACAGTTACTAGTGATGCAAAATATGCGATTTCTCTAATAAGTGCTGAG AATTCGGTTATTGTTGATAATTTATTAATATCTACTAGGAAAGATGCGAAAGCCAGTTATGATGCATTCAATACGAAAGG AAAATTTTATAATACTTCATATTATAATAATCGTGTAGTCAATGCATTTGATTATTATGCGGAAATTTACAATCATGTTG ACGGAGGTTCTGAATTTAATTATACGACTCCTACCAATGTGAACAATTTGACAAATAAGGTTGATGGTTCAAAAATAAAA CCATGGTTCCCTGATTTCCCTAATAGAAATCCTTTACTTCCTAAACCTGGTGACGGAAGTAGTGTTATTGTAACTCCTGA CGATGGTGATGATAAAAATCCAAATGTTCCAGATAGACCTGACGGTGATGCAGGTTATGTGGATGTCCCTGATTTATCTG GTGATGATGGAGGATCAAAAAATCCGTCTAACGGCACTAGTAGTACAGATAAAAATTCTAACAAATTAGGTGTAAGTTTA CTTGATGCTTTGATTAATTTCTTGAATTCAAATACAGACACTGGAGACTCAAGATCCAATTCATATGGTGGAACTGTTCG TACAAATAGCAGTACTTCATCTAGTGACAGTCCAAGCCTTGACGGAAATCCATCTCCAGCAAGTAGCACAAAATCCTCTT CAGGATCAAATGCAAAAAGTGCTGGAAGTTCTGCAGGTGATGACTCCAAATCTGTAAAAGCATATGAAATTGATAAAAAT ATAATGAAAAGTAATCCGAATACAATTATTGCTTCTATTATATTAATTATAATCGTTGCTTTGTTAATATTTGTTGGATA CAAACGCAGAAAATTAAACGAAGAATAA
Upstream 100 bases:
>100_bases TTATAAAATGACTTATTTTAGTTTTAAAAGATTTTATTAAAACTAAAAAGAGGTGAAAAAGATTAAATTAAGTCGAAAAA TAATAATTACATCTTTGTTA
Downstream 100 bases:
>100_bases TTTAAAATTATGATTAGTCTTTATGACTATTCTTTTTCTTTTTTTATAAAAAATAGTAAAAATGTAGGTTTATAATCTAC CTACTTTAATTAAAGATTCG
Product: adhesin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 755; Mature: 755
Protein sequence:
>755_residues MLFFVIMGCVSANDLSTLGENTTVPNIIIVGDAPEVPDVPDIPDIPDFPVDPDNPDIDDQNDSDTVNLTIFNIDEYFVDG TLGVEHSNTKFVLTQNFDNLGLLKIEANNVTILGNNFTLQNVAFLINGKDVTLANFTLVNDFDFKDADGAAILTLANNTH IRDCVINYNVPRDSEGYGISAVGRRIAPISGLEVINCIINFEGHNYKANTYNYALKVSNCPNALIANNSIYTQLPLRDVN FGAVGADLNSNYVASVGIEYSNNLTFIGNIVASIVNKRPGSPFPTLDGIIIADSNDCLVKNNTLYMEDFLTFPGLNNYLY GIDVWRVNSLTLDSNNIAILTTGGMLSAGTAYPIQITGPSKKINITNNDLYSISNGPNIGIYSQNYYGDTQLYIAHNKIN VTGLAGNDSWALVAGIEVQDSNDTIINNTIEVHSVAEVKDNDNMYGISYSQSTKGNHTFVIKNNTVTSDAKYAISLISAE NSVIVDNLLISTRKDAKASYDAFNTKGKFYNTSYYNNRVVNAFDYYAEIYNHVDGGSEFNYTTPTNVNNLTNKVDGSKIK PWFPDFPNRNPLLPKPGDGSSVIVTPDDGDDKNPNVPDRPDGDAGYVDVPDLSGDDGGSKNPSNGTSSTDKNSNKLGVSL LDALINFLNSNTDTGDSRSNSYGGTVRTNSSTSSSDSPSLDGNPSPASSTKSSSGSNAKSAGSSAGDDSKSVKAYEIDKN IMKSNPNTIIASIILIIIVALLIFVGYKRRKLNEE
Sequences:
>Translated_755_residues MLFFVIMGCVSANDLSTLGENTTVPNIIIVGDAPEVPDVPDIPDIPDFPVDPDNPDIDDQNDSDTVNLTIFNIDEYFVDG TLGVEHSNTKFVLTQNFDNLGLLKIEANNVTILGNNFTLQNVAFLINGKDVTLANFTLVNDFDFKDADGAAILTLANNTH IRDCVINYNVPRDSEGYGISAVGRRIAPISGLEVINCIINFEGHNYKANTYNYALKVSNCPNALIANNSIYTQLPLRDVN FGAVGADLNSNYVASVGIEYSNNLTFIGNIVASIVNKRPGSPFPTLDGIIIADSNDCLVKNNTLYMEDFLTFPGLNNYLY GIDVWRVNSLTLDSNNIAILTTGGMLSAGTAYPIQITGPSKKINITNNDLYSISNGPNIGIYSQNYYGDTQLYIAHNKIN VTGLAGNDSWALVAGIEVQDSNDTIINNTIEVHSVAEVKDNDNMYGISYSQSTKGNHTFVIKNNTVTSDAKYAISLISAE NSVIVDNLLISTRKDAKASYDAFNTKGKFYNTSYYNNRVVNAFDYYAEIYNHVDGGSEFNYTTPTNVNNLTNKVDGSKIK PWFPDFPNRNPLLPKPGDGSSVIVTPDDGDDKNPNVPDRPDGDAGYVDVPDLSGDDGGSKNPSNGTSSTDKNSNKLGVSL LDALINFLNSNTDTGDSRSNSYGGTVRTNSSTSSSDSPSLDGNPSPASSTKSSSGSNAKSAGSSAGDDSKSVKAYEIDKN IMKSNPNTIIASIILIIIVALLIFVGYKRRKLNEE >Mature_755_residues MLFFVIMGCVSANDLSTLGENTTVPNIIIVGDAPEVPDVPDIPDIPDFPVDPDNPDIDDQNDSDTVNLTIFNIDEYFVDG TLGVEHSNTKFVLTQNFDNLGLLKIEANNVTILGNNFTLQNVAFLINGKDVTLANFTLVNDFDFKDADGAAILTLANNTH IRDCVINYNVPRDSEGYGISAVGRRIAPISGLEVINCIINFEGHNYKANTYNYALKVSNCPNALIANNSIYTQLPLRDVN FGAVGADLNSNYVASVGIEYSNNLTFIGNIVASIVNKRPGSPFPTLDGIIIADSNDCLVKNNTLYMEDFLTFPGLNNYLY GIDVWRVNSLTLDSNNIAILTTGGMLSAGTAYPIQITGPSKKINITNNDLYSISNGPNIGIYSQNYYGDTQLYIAHNKIN VTGLAGNDSWALVAGIEVQDSNDTIINNTIEVHSVAEVKDNDNMYGISYSQSTKGNHTFVIKNNTVTSDAKYAISLISAE NSVIVDNLLISTRKDAKASYDAFNTKGKFYNTSYYNNRVVNAFDYYAEIYNHVDGGSEFNYTTPTNVNNLTNKVDGSKIK PWFPDFPNRNPLLPKPGDGSSVIVTPDDGDDKNPNVPDRPDGDAGYVDVPDLSGDDGGSKNPSNGTSSTDKNSNKLGVSL LDALINFLNSNTDTGDSRSNSYGGTVRTNSSTSSSDSPSLDGNPSPASSTKSSSGSNAKSAGSSAGDDSKSVKAYEIDKN IMKSNPNTIIASIILIIIVALLIFVGYKRRKLNEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81443; Mature: 81443
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFFVIMGCVSANDLSTLGENTTVPNIIIVGDAPEVPDVPDIPDIPDFPVDPDNPDIDDQ CEEEEEEECCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDSDTVNLTIFNIDEYFVDGTLGVEHSNTKFVLTQNFDNLGLLKIEANNVTILGNNFTLQ CCCCEEEEEEEECHHEEECCEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCEEEE NVAFLINGKDVTLANFTLVNDFDFKDADGAAILTLANNTHIRDCVINYNVPRDSEGYGIS EEEEEEECCEEEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCHH AVGRRIAPISGLEVINCIINFEGHNYKANTYNYALKVSNCPNALIANNSIYTQLPLRDVN HHCCCCCCCCCCEEEEEEEEECCCCEECCEEEEEEEECCCCCEEEECCEEEEEECCEECC FGAVGADLNSNYVASVGIEYSNNLTFIGNIVASIVNKRPGSPFPTLDGIIIADSNDCLVK CCEEECCCCCCEEEEEEEEECCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEE NNTLYMEDFLTFPGLNNYLYGIDVWRVNSLTLDSNNIAILTTGGMLSAGTAYPIQITGPS CCEEEEEHHHCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCEECCCEEEEEEECCC KKINITNNDLYSISNGPNIGIYSQNYYGDTQLYIAHNKINVTGLAGNDSWALVAGIEVQD CEEEECCCCEEEECCCCCEEEEECCCCCCEEEEEEECEEEEEEECCCCCEEEEEEEEEEC SNDTIINNTIEVHSVAEVKDNDNMYGISYSQSTKGNHTFVIKNNTVTSDAKYAISLISAE CCCEEEECEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCEECCCCEEEEEEEECC NSVIVDNLLISTRKDAKASYDAFNTKGKFYNTSYYNNRVVNAFDYYAEIYNHVDGGSEFN CCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCC YTTPTNVNNLTNKVDGSKIKPWFPDFPNRNPLLPKPGDGSSVIVTPDDGDDKNPNVPDRP CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC DGDAGYVDVPDLSGDDGGSKNPSNGTSSTDKNSNKLGVSLLDALINFLNSNTDTGDSRSN CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC SYGGTVRTNSSTSSSDSPSLDGNPSPASSTKSSSGSNAKSAGSSAGDDSKSVKAYEIDKN CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHH IMKSNPNTIIASIILIIIVALLIFVGYKRRKLNEE HHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MLFFVIMGCVSANDLSTLGENTTVPNIIIVGDAPEVPDVPDIPDIPDFPVDPDNPDIDDQ CEEEEEEECCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDSDTVNLTIFNIDEYFVDGTLGVEHSNTKFVLTQNFDNLGLLKIEANNVTILGNNFTLQ CCCCEEEEEEEECHHEEECCEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCEEEE NVAFLINGKDVTLANFTLVNDFDFKDADGAAILTLANNTHIRDCVINYNVPRDSEGYGIS EEEEEEECCEEEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCHH AVGRRIAPISGLEVINCIINFEGHNYKANTYNYALKVSNCPNALIANNSIYTQLPLRDVN HHCCCCCCCCCCEEEEEEEEECCCCEECCEEEEEEEECCCCCEEEECCEEEEEECCEECC FGAVGADLNSNYVASVGIEYSNNLTFIGNIVASIVNKRPGSPFPTLDGIIIADSNDCLVK CCEEECCCCCCEEEEEEEEECCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEE NNTLYMEDFLTFPGLNNYLYGIDVWRVNSLTLDSNNIAILTTGGMLSAGTAYPIQITGPS CCEEEEEHHHCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCEECCCEEEEEEECCC KKINITNNDLYSISNGPNIGIYSQNYYGDTQLYIAHNKINVTGLAGNDSWALVAGIEVQD CEEEECCCCEEEECCCCCEEEEECCCCCCEEEEEEECEEEEEEECCCCCEEEEEEEEEEC SNDTIINNTIEVHSVAEVKDNDNMYGISYSQSTKGNHTFVIKNNTVTSDAKYAISLISAE CCCEEEECEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCEECCCCEEEEEEEECC NSVIVDNLLISTRKDAKASYDAFNTKGKFYNTSYYNNRVVNAFDYYAEIYNHVDGGSEFN CCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCC YTTPTNVNNLTNKVDGSKIKPWFPDFPNRNPLLPKPGDGSSVIVTPDDGDDKNPNVPDRP CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC DGDAGYVDVPDLSGDDGGSKNPSNGTSSTDKNSNKLGVSLLDALINFLNSNTDTGDSRSN CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC SYGGTVRTNSSTSSSDSPSLDGNPSPASSTKSSSGSNAKSAGSSAGDDSKSVKAYEIDKN CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHH IMKSNPNTIIASIILIIIVALLIFVGYKRRKLNEE HHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA