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The map label for this gene is hfoA2 [H]

Identifier: 148642904

GI number: 148642904

Start: 801509

End: 801709

Strand: Reverse

Name: hfoA2 [H]

Synonym: Msm_0844

Alternate gene names: 148642904

Gene position: 801709-801509 (Counterclockwise)

Preceding gene: 148642905

Following gene: 148642901

Centisome position: 43.26

GC content: 37.81

Gene sequence:

>201_bases
ATGAGTGAATTACCAATCGCACCAGTCGGTCGTATCTTAAAAAATGCTGGCGCACAAAGAATTAGTGATGATGCAAAAAT
TGCATTAGCTGAAGCATTAGAAGAAAAAGGTGACGCAATTGCACAAAAAGCTGTAAATTTCGCACGCCACGCTGGTAGAA
AAACTGTAAAAGCTGAAGATATCAAATTAGCTATCAAATAG

Upstream 100 bases:

>100_bases
ATACTATTATGTTTATGGTTATTGTATAAAGGGTAAATAGCCATTATTGCCGATACATTTATATACTATATGGTACTATG
TTTTAATTGGAGGTGTCATT

Downstream 100 bases:

>100_bases
GCTTTTTAACAATTTATTAAATCTATTGGCCATTTTCTTGGTCAATTTTTTATATTTTTATTTTTCATCGGTTTTTATTG
TAACAGATAACTTTATATAC

Product: histone, HmtA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MSELPIAPVGRILKNAGAQRISDDAKIALAEALEEKGDAIAQKAVNFARHAGRKTVKAEDIKLAIK

Sequences:

>Translated_66_residues
MSELPIAPVGRILKNAGAQRISDDAKIALAEALEEKGDAIAQKAVNFARHAGRKTVKAEDIKLAIK
>Mature_65_residues
SELPIAPVGRILKNAGAQRISDDAKIALAEALEEKGDAIAQKAVNFARHAGRKTVKAEDIKLAIK

Specific function: Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils [H]

COG id: COG2036

COG function: function code B; Histones H3 and H4

Gene ontology:

Cell location: Cytoplasm (Potential). Chromosome (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal histone HMF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003958
- InterPro:   IPR009072 [H]

Pfam domain/function: PF00808 CBFD_NFYB_HMF [H]

EC number: NA

Molecular weight: Translated: 7022; Mature: 6891

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELPIAPVGRILKNAGAQRISDDAKIALAEALEEKGDAIAQKAVNFARHAGRKTVKAED
CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IKLAIK
EEEECC
>Mature Secondary Structure 
SELPIAPVGRILKNAGAQRISDDAKIALAEALEEKGDAIAQKAVNFARHAGRKTVKAED
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IKLAIK
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836329 [H]