| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642885
Identifier: 148642885
GI number: 148642885
Start: 783008
End: 784030
Strand: Reverse
Name: 148642885
Synonym: Msm_0825
Alternate gene names: NA
Gene position: 784030-783008 (Counterclockwise)
Preceding gene: 148642886
Following gene: 148642884
Centisome position: 42.31
GC content: 31.18
Gene sequence:
>1023_bases TTGCAAGCTAAACGACTTATTTTTAAAAATTCAACTGGAGACAGAGCATATATCTGTGAAAACTCTATAGTGGTTGAGTT TGGAGTTTGCAGGAATGGAATTTCAACGTCTGATTTAAATGGCGGCTACAAAAAAGATTTTAAAACAGCTTTCAACCATT ATTTATCTCAGGAAAACATTGATTTTTTAGAAAACCATAGCATAAATGATTATCTGCTTAGGCAAAGCGAAATTTTAGGA ATTGATTCTGATTTTACAACAGGTCTTTTAACTTCCGCCCAGATGGAAAATGCATGTGTTGTTACAAAACATTATAAAAA TCTTGAAGTCAGTGCAATAACTACTGCAGGTGTAAGAGTAAATGCCTCAAGAGCAGGAGACAGTGCAAGCTATTATGAGG AAAATGGAGAGTTTCACTTTGATGTTGGAACAATCAATATAATTGTTTTAACTAATGTTTCGTTAGAACCAGGAACATTA GCTAATGGATTAGTAACTGCTACTGAAGCAAAAACTGTAGCTTTAAACAATTTAAGAATTCCCAGTCAGTTTTCAAATGG ATTTGCAACAGGAACAGGAACTGACGGAATAGCTATTTTTTCAAATATGGAATCCAAAAACAGATTATCCAATGCAGGAA AACATTCGAAACTTGGTGAATTGATAGCTAAATGTGTTATTGAATCAATAAGTGAAGCTATTAAAAGACAGGTATGGATT ACAAAAGAATCTCAATGCAGTGTTTTAGCTCGTTTAAGAAGATATGATTTGGATATTAATGAGTTTTATAGTAATATTGG TGACGATAAGGAAGAATTTATAAAATCATTACAGGAAGCTGCAAGAAAACAGGAAAATGTAGCATTAACCACTTCAATTT TACATTTAATTGATGAAGTTGAAAATGATTTATTGGATAAAAAAGTAGCTTATAACTTAGCTGCTTCTATTTTAGAAAAT AACTGCAAGGATTATTGTATTCAGAAGCTTTTAGAGTTTTGGATTAATAAATTTTTAAGTTAA
Upstream 100 bases:
>100_bases CGGTATGGATCCTGCTGCTATGGGCGGTATGCCTCCAATGATGTAAATCTAAAAGAAATTATTTAATTTCTTTTTTTCTT TTTATTTTTAAGGTATTATC
Downstream 100 bases:
>100_bases TTTTTTATAATACTAGCTAGTAATATATATTGCATGATAAGACTGGCAAGTATAAGAGACATCAGAAGAATTAATGAACT GCTGCTTCAGGTTCAGAAAG
Product: adenosylcobinamide amidohydrolase, CbiZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MQAKRLIFKNSTGDRAYICENSIVVEFGVCRNGISTSDLNGGYKKDFKTAFNHYLSQENIDFLENHSINDYLLRQSEILG IDSDFTTGLLTSAQMENACVVTKHYKNLEVSAITTAGVRVNASRAGDSASYYEENGEFHFDVGTINIIVLTNVSLEPGTL ANGLVTATEAKTVALNNLRIPSQFSNGFATGTGTDGIAIFSNMESKNRLSNAGKHSKLGELIAKCVIESISEAIKRQVWI TKESQCSVLARLRRYDLDINEFYSNIGDDKEEFIKSLQEAARKQENVALTTSILHLIDEVENDLLDKKVAYNLAASILEN NCKDYCIQKLLEFWINKFLS
Sequences:
>Translated_340_residues MQAKRLIFKNSTGDRAYICENSIVVEFGVCRNGISTSDLNGGYKKDFKTAFNHYLSQENIDFLENHSINDYLLRQSEILG IDSDFTTGLLTSAQMENACVVTKHYKNLEVSAITTAGVRVNASRAGDSASYYEENGEFHFDVGTINIIVLTNVSLEPGTL ANGLVTATEAKTVALNNLRIPSQFSNGFATGTGTDGIAIFSNMESKNRLSNAGKHSKLGELIAKCVIESISEAIKRQVWI TKESQCSVLARLRRYDLDINEFYSNIGDDKEEFIKSLQEAARKQENVALTTSILHLIDEVENDLLDKKVAYNLAASILEN NCKDYCIQKLLEFWINKFLS >Mature_340_residues MQAKRLIFKNSTGDRAYICENSIVVEFGVCRNGISTSDLNGGYKKDFKTAFNHYLSQENIDFLENHSINDYLLRQSEILG IDSDFTTGLLTSAQMENACVVTKHYKNLEVSAITTAGVRVNASRAGDSASYYEENGEFHFDVGTINIIVLTNVSLEPGTL ANGLVTATEAKTVALNNLRIPSQFSNGFATGTGTDGIAIFSNMESKNRLSNAGKHSKLGELIAKCVIESISEAIKRQVWI TKESQCSVLARLRRYDLDINEFYSNIGDDKEEFIKSLQEAARKQENVALTTSILHLIDEVENDLLDKKVAYNLAASILEN NCKDYCIQKLLEFWINKFLS
Specific function: Unknown
COG id: COG1865
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002808 [H]
Pfam domain/function: PF01955 CbiZ [H]
EC number: NA
Molecular weight: Translated: 37819; Mature: 37819
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAKRLIFKNSTGDRAYICENSIVVEFGVCRNGISTSDLNGGYKKDFKTAFNHYLSQENI CCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC DFLENHSINDYLLRQSEILGIDSDFTTGLLTSAQMENACVVTKHYKNLEVSAITTAGVRV CHHHCCCCHHHHHHHHHEECCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCEEE NASRAGDSASYYEENGEFHFDVGTINIIVLTNVSLEPGTLANGLVTATEAKTVALNNLRI ECCCCCCCCHHHHCCCCEEEEECEEEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCC PSQFSNGFATGTGTDGIAIFSNMESKNRLSNAGKHSKLGELIAKCVIESISEAIKRQVWI CHHHCCCCCCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TKESQCSVLARLRRYDLDINEFYSNIGDDKEEFIKSLQEAARKQENVALTTSILHLIDEV CCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ENDLLDKKVAYNLAASILENNCKDYCIQKLLEFWINKFLS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQAKRLIFKNSTGDRAYICENSIVVEFGVCRNGISTSDLNGGYKKDFKTAFNHYLSQENI CCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC DFLENHSINDYLLRQSEILGIDSDFTTGLLTSAQMENACVVTKHYKNLEVSAITTAGVRV CHHHCCCCHHHHHHHHHEECCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCEEE NASRAGDSASYYEENGEFHFDVGTINIIVLTNVSLEPGTLANGLVTATEAKTVALNNLRI ECCCCCCCCHHHHCCCCEEEEECEEEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCC PSQFSNGFATGTGTDGIAIFSNMESKNRLSNAGKHSKLGELIAKCVIESISEAIKRQVWI CHHHCCCCCCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TKESQCSVLARLRRYDLDINEFYSNIGDDKEEFIKSLQEAARKQENVALTTSILHLIDEV CCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ENDLLDKKVAYNLAASILENNCKDYCIQKLLEFWINKFLS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]