| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
Click here to switch to the map view.
The map label for this gene is 148642858
Identifier: 148642858
GI number: 148642858
Start: 759927
End: 760352
Strand: Reverse
Name: 148642858
Synonym: Msm_0798
Alternate gene names: NA
Gene position: 760352-759927 (Counterclockwise)
Preceding gene: 148642859
Following gene: 148642856
Centisome position: 41.03
GC content: 28.87
Gene sequence:
>426_bases ATGGAATTTAGAAACGTCAATACTTCTAATTTAACATTCAAATATCCTGTAACCTGGGAAAAAGAAAAAGCAGACACTTA TAATAATCCTGATTGTGTAGCTACATTGTCTAAAGGGGAAGAAAATTTACTTAATGTTGTAATGTTTCCAACAAGAACAA ATATTGAAGATTATAAGTTATTTATGGAGGATGCTATCAGTGATGATGGTGGTGTTATTTTAGAATCCGATTTTGTTGAA ATCGCCGGAAAACATGCTATTAAAACACATGCAAATATGGATACTCCAGATATCAACTTTGACATTCACAATTATGTGTT TATAGAAAATGGAAATATTTATATCTTTGAATTGAGAACTGTTGAAGCTTCTTTGGAACCAGTTACAGAATTTAAAGATA TGATTAATACTTTAGTATTAAAATAA
Upstream 100 bases:
>100_bases TAAACTTCCTGAACCATTTTCCAAATATATTGACACATTAGATGATGATGAATATGAAACAGCACCTATTGATGTTAAAC ACAAAAAGGGAGATTAGATT
Downstream 100 bases:
>100_bases TTGACTGTATTCTAAAAGATAATCTTTATGTTGTTTATCTAATATTTTTAAAGCAGAAACATTTTGAGGACTGGTAAGTG ACCTTTCTTCAACTAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MEFRNVNTSNLTFKYPVTWEKEKADTYNNPDCVATLSKGEENLLNVVMFPTRTNIEDYKLFMEDAISDDGGVILESDFVE IAGKHAIKTHANMDTPDINFDIHNYVFIENGNIYIFELRTVEASLEPVTEFKDMINTLVLK
Sequences:
>Translated_141_residues MEFRNVNTSNLTFKYPVTWEKEKADTYNNPDCVATLSKGEENLLNVVMFPTRTNIEDYKLFMEDAISDDGGVILESDFVE IAGKHAIKTHANMDTPDINFDIHNYVFIENGNIYIFELRTVEASLEPVTEFKDMINTLVLK >Mature_141_residues MEFRNVNTSNLTFKYPVTWEKEKADTYNNPDCVATLSKGEENLLNVVMFPTRTNIEDYKLFMEDAISDDGGVILESDFVE IAGKHAIKTHANMDTPDINFDIHNYVFIENGNIYIFELRTVEASLEPVTEFKDMINTLVLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16192; Mature: 16192
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFRNVNTSNLTFKYPVTWEKEKADTYNNPDCVATLSKGEENLLNVVMFPTRTNIEDYKL CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHH FMEDAISDDGGVILESDFVEIAGKHAIKTHANMDTPDINFDIHNYVFIENGNIYIFELRT HHHHHCCCCCCEEEECCHHHHCCCCEEEECCCCCCCCCCEEECEEEEEECCCEEEEEEEE VEASLEPVTEFKDMINTLVLK ECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MEFRNVNTSNLTFKYPVTWEKEKADTYNNPDCVATLSKGEENLLNVVMFPTRTNIEDYKL CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHH FMEDAISDDGGVILESDFVEIAGKHAIKTHANMDTPDINFDIHNYVFIENGNIYIFELRT HHHHHCCCCCCEEEECCHHHHCCCCEEEECCCCCCCCCCEEECEEEEEECCCEEEEEEEE VEASLEPVTEFKDMINTLVLK ECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA