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The map label for this gene is hdrC [H]

Identifier: 148642856

GI number: 148642856

Start: 757969

End: 759018

Strand: Reverse

Name: hdrC [H]

Synonym: Msm_0796

Alternate gene names: 148642856

Gene position: 759018-757969 (Counterclockwise)

Preceding gene: 148642858

Following gene: 148642855

Centisome position: 40.96

GC content: 32.38

Gene sequence:

>1050_bases
ATGATTATCCGAGGTGTGTTTTCAATGTCTATTATTGATAATCTAAAATCTTTATTTAAAAGAGGTAAAGATAATGAAGA
AAAAGGTATTGATGATTTAAAATCTGAAGATACCAAAGTTACATCTTCCAACAATCTTGATGAAAGTATTGTTTCAGGAA
CTAAAACTACTGAACCTATGGTTAAGATTAAAATTAGTTCAGATGACACTGAGGATATGACTTTTAAAAAAGACGTTAAG
ACTTCTGAAACTAGTGATGTTGAAGAAAACGAAGAAATTGCTCCGGAAATTGATGATGCAGAGGAAAAAACTGAAGTTCT
TGACGAACTAGATATTTTAACTGATGATTCAAATGAGGATGATGAAGTTTCTGAAGATGAAAATAACACCACTGAAACTG
AAGACGAGTCAATTGATGAGTCTGAAGAAGTAGTTAACGACGAAAAAGTTGAAAACGAAGTTTCAAAAGATAATGATAAA
AAGAGAGATAATATGACTTTATTGACTGATAAAGAATTATTAACCGATGCAAATCGTGATAAAGAATTTACAGCAGAATT
CATTGATGCTGGAATCGAAACAGTTAAACATTGTTTCCAATGTGGTACCTGTGGTGGAAGTTGTCCTTCTGGAAGAAGAA
CTCCTTATAAAGTAAGACAAATAGTAAGGAAATGTTTACTTGGTTTAAAAGAAGAAGTAATTTCCGATGATGCTTTATGG
ATGTGTACTACTTGTTACACCTGTCAAGAAAGATGTCCTAGAAGTGTTAAAATCGTTGAAATCATTAAAAAAGCACGTAA
CGTTGCTGCTCATGCTGGTTACATGGCTCTTGCTCACAAAAAAACTGGTTTATTTGTAATTAAAACCGGTCACGGAGTAC
CTATTAATGATGCAACTAAAGCTTTAAGATCCAAAATCGGTCTTTCAGAATTACCTGCAACCACTCATTCATTCCCAGAA
GCTTTAGAAGAAGTACAAAAAATATGTGAAATCACTGCTTTTGATGAATTAATTGGTTATGATAAAGCAACCGGAGATTT
AAAAGAATAA

Upstream 100 bases:

>100_bases
TGGTAGTGTAATCTTTTAGCTTACACTTTTGAAAAATTTAGTAACCTTTATATATGGTTTTTTGACAGAATATTAGTATG
GATTTGAGGAATATATTCCG

Downstream 100 bases:

>100_bases
TTTAATTGAGGAGAGTATTAATATGGAAATTGCATACTTCTTAGGTTGTATTATGAACAACCGTTACCCTGGTATTGAAA
AAGCAACCAGACAATTATTT

Product: heterodisulfide reductase, subunit C, HdrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MIIRGVFSMSIIDNLKSLFKRGKDNEEKGIDDLKSEDTKVTSSNNLDESIVSGTKTTEPMVKIKISSDDTEDMTFKKDVK
TSETSDVEENEEIAPEIDDAEEKTEVLDELDILTDDSNEDDEVSEDENNTTETEDESIDESEEVVNDEKVENEVSKDNDK
KRDNMTLLTDKELLTDANRDKEFTAEFIDAGIETVKHCFQCGTCGGSCPSGRRTPYKVRQIVRKCLLGLKEEVISDDALW
MCTTCYTCQERCPRSVKIVEIIKKARNVAAHAGYMALAHKKTGLFVIKTGHGVPINDATKALRSKIGLSELPATTHSFPE
ALEEVQKICEITAFDELIGYDKATGDLKE

Sequences:

>Translated_349_residues
MIIRGVFSMSIIDNLKSLFKRGKDNEEKGIDDLKSEDTKVTSSNNLDESIVSGTKTTEPMVKIKISSDDTEDMTFKKDVK
TSETSDVEENEEIAPEIDDAEEKTEVLDELDILTDDSNEDDEVSEDENNTTETEDESIDESEEVVNDEKVENEVSKDNDK
KRDNMTLLTDKELLTDANRDKEFTAEFIDAGIETVKHCFQCGTCGGSCPSGRRTPYKVRQIVRKCLLGLKEEVISDDALW
MCTTCYTCQERCPRSVKIVEIIKKARNVAAHAGYMALAHKKTGLFVIKTGHGVPINDATKALRSKIGLSELPATTHSFPE
ALEEVQKICEITAFDELIGYDKATGDLKE
>Mature_349_residues
MIIRGVFSMSIIDNLKSLFKRGKDNEEKGIDDLKSEDTKVTSSNNLDESIVSGTKTTEPMVKIKISSDDTEDMTFKKDVK
TSETSDVEENEEIAPEIDDAEEKTEVLDELDILTDDSNEDDEVSEDENNTTETEDESIDESEEVVNDEKVENEVSKDNDK
KRDNMTLLTDKELLTDANRDKEFTAEFIDAGIETVKHCFQCGTCGGSCPSGRRTPYKVRQIVRKCLLGLKEEVISDDALW
MCTTCYTCQERCPRSVKIVEIIKKARNVAAHAGYMALAHKKTGLFVIKTGHGVPINDATKALRSKIGLSELPATTHSFPE
ALEEVQKICEITAFDELIGYDKATGDLKE

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrC may carry electrons from hydrogenase to hdrA [H]

COG id: COG1150

COG function: function code C; Heterodisulfide reductase, subunit C

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 38961; Mature: 38961

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRGVFSMSIIDNLKSLFKRGKDNEEKGIDDLKSEDTKVTSSNNLDESIVSGTKTTEPM
CEEHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCEECCCCCCHHHHHCCCCCCCCE
VKIKISSDDTEDMTFKKDVKTSETSDVEENEEIAPEIDDAEEKTEVLDELDILTDDSNED
EEEEECCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
DEVSEDENNTTETEDESIDESEEVVNDEKVENEVSKDNDKKRDNMTLLTDKELLTDANRD
CCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCEEEEECHHHHHCCCCC
KEFTAEFIDAGIETVKHCFQCGTCGGSCPSGRRTPYKVRQIVRKCLLGLKEEVISDDALW
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
MCTTCYTCQERCPRSVKIVEIIKKARNVAAHAGYMALAHKKTGLFVIKTGHGVPINDATK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCHHHH
ALRSKIGLSELPATTHSFPEALEEVQKICEITAFDELIGYDKATGDLKE
HHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIIRGVFSMSIIDNLKSLFKRGKDNEEKGIDDLKSEDTKVTSSNNLDESIVSGTKTTEPM
CEEHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCEECCCCCCHHHHHCCCCCCCCE
VKIKISSDDTEDMTFKKDVKTSETSDVEENEEIAPEIDDAEEKTEVLDELDILTDDSNED
EEEEECCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
DEVSEDENNTTETEDESIDESEEVVNDEKVENEVSKDNDKKRDNMTLLTDKELLTDANRD
CCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCEEEEECHHHHHCCCCC
KEFTAEFIDAGIETVKHCFQCGTCGGSCPSGRRTPYKVRQIVRKCLLGLKEEVISDDALW
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
MCTTCYTCQERCPRSVKIVEIIKKARNVAAHAGYMALAHKKTGLFVIKTGHGVPINDATK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCHHHH
ALRSKIGLSELPATTHSFPEALEEVQKICEITAFDELIGYDKATGDLKE
HHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]