| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is rpl14e [H]
Identifier: 148642793
GI number: 148642793
Start: 706952
End: 707173
Strand: Reverse
Name: rpl14e [H]
Synonym: Msm_0733
Alternate gene names: 148642793
Gene position: 707173-706952 (Counterclockwise)
Preceding gene: 148642794
Following gene: 148642792
Centisome position: 38.16
GC content: 37.39
Gene sequence:
>222_bases ATGGCAGCAATTGAAGTAGGAAGAGTTTGTGTTAAAACCGCTGGTAGAGAAGCTGGCGAAAAATGTGCAATCGTAGAAAT CATCGACGAAAACTTCGTTGAAGTAATCGGTGAATCTGTTAAAAATAGAAGATGTAACATTGCTCATTTAGAACCAACTG CAGATTCTGTAGATGTTTCTGGTGATGCTGACTCTATTAAAGCAGCTTTAGCTGATTTATAA
Upstream 100 bases:
>100_bases ATATTAGTAATTTAGATATTTATGACTTAATGATTAATACTGACAGTTTTGACCCTGAAAGTATAACAAAAATTATTCTA ACAACATTAAAGGTGATATA
Downstream 100 bases:
>100_bases ATGGATAATTAATTAAATTATTCATTACTTATTTTTATTTACTTATTTTTTTTATTTATTGATTTTTAGTGATTTTTCAT GAAAGACTTTCTTACAAAAT
Product: 50S ribosomal protein L14e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MAAIEVGRVCVKTAGREAGEKCAIVEIIDENFVEVIGESVKNRRCNIAHLEPTADSVDVSGDADSIKAALADL
Sequences:
>Translated_73_residues MAAIEVGRVCVKTAGREAGEKCAIVEIIDENFVEVIGESVKNRRCNIAHLEPTADSVDVSGDADSIKAALADL >Mature_72_residues AAIEVGRVCVKTAGREAGEKCAIVEIIDENFVEVIGESVKNRRCNIAHLEPTADSVDVSGDADSIKAALADL
Specific function: Unknown
COG id: COG2163
COG function: function code J; Ribosomal protein L14E/L6E/L27E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L14e family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005824 - InterPro: IPR014722 [H]
Pfam domain/function: PF00467 KOW [H]
EC number: NA
Molecular weight: Translated: 7685; Mature: 7554
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIEVGRVCVKTAGREAGEKCAIVEIIDENFVEVIGESVKNRRCNIAHLEPTADSVDVS CCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECC GDADSIKAALADL CCHHHHHHHHHCC >Mature Secondary Structure AAIEVGRVCVKTAGREAGEKCAIVEIIDENFVEVIGESVKNRRCNIAHLEPTADSVDVS CCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECC GDADSIKAALADL CCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]