Click here to switch to the map view.

The map label for this gene is 148642719

Identifier: 148642719

GI number: 148642719

Start: 639479

End: 640177

Strand: Reverse

Name: 148642719

Synonym: Msm_0659

Alternate gene names: NA

Gene position: 640177-639479 (Counterclockwise)

Preceding gene: 148642721

Following gene: 148642718

Centisome position: 34.55

GC content: 32.62

Gene sequence:

>699_bases
ATGGTTGAAAAGTTAATAATGATTAATTGGGGTTATGTTCTAATCCTGTTTTTATTGGGATTCTTAACATACAAAAGAAA
ATCCTTAGACGCTCTTGGATCAGTTGTTATGATTATTATGGGAGTTATCATTATTTTCTCAGCAGGATTTAACTGGTTAT
TATTAATTTTAATATTCCTTATTTTAAGTTTGGCGGCTACAAAATTCTCAAAATCCTATAAAAAATCTTTAGGGGAATTT
GAAGGTAGAAGAACTTCTAAAAATGTTATTTCAAATGGTATTGTAGCAGTTATGATGGCTGCATTTGGAGGTTATTACTT
ATCATTTGTCGGAGGATTTATTGGGGCAATAGCTACTGCAACAGCAGATACTTTAGCCAGTGAAATAGGAGTATTGCATC
AGCCTAGATTAATTACTACTTTTAAAAAGGTTGAACCTGGAACTGACGGCGCAGTATCTGTTTTGGGAACTGTTGCAGGT
ATGATTGGTGCAGCTATTGTTGGTATTTGTGCTTATTTGCTTGGAATTATTAATGATTCTGTTTTAGCTATTATTTTAGC
AGTTATTCCTGGAACATTAGGTTGTTTTATGGACAGTATCCTTGGAGCAGTCTTTGAAAGAAAAGATTTGCTTACAAATG
AACATGTAAATCTTATAGCTACTATTACCGGAGCTTTAATCGGTATTTTACTTGTTTAA

Upstream 100 bases:

>100_bases
TTCTCATAGAATAAATTATGGTTAATATATTATATTAATTATATGGTTAAATTAGGTAGCTTTTTATATTATCCTTTAGA
AATATTATTGTGTTGATAAT

Downstream 100 bases:

>100_bases
TTAATTATTTTAATAAGTTAAAACAGATAGTAAATCATGTCTGTAGTAGAGTTTAATTTTGATATTGCTGTTTCAACACT
TATTGCAGTAATTATTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MVEKLIMINWGYVLILFLLGFLTYKRKSLDALGSVVMIIMGVIIIFSAGFNWLLLILIFLILSLAATKFSKSYKKSLGEF
EGRRTSKNVISNGIVAVMMAAFGGYYLSFVGGFIGAIATATADTLASEIGVLHQPRLITTFKKVEPGTDGAVSVLGTVAG
MIGAAIVGICAYLLGIINDSVLAIILAVIPGTLGCFMDSILGAVFERKDLLTNEHVNLIATITGALIGILLV

Sequences:

>Translated_232_residues
MVEKLIMINWGYVLILFLLGFLTYKRKSLDALGSVVMIIMGVIIIFSAGFNWLLLILIFLILSLAATKFSKSYKKSLGEF
EGRRTSKNVISNGIVAVMMAAFGGYYLSFVGGFIGAIATATADTLASEIGVLHQPRLITTFKKVEPGTDGAVSVLGTVAG
MIGAAIVGICAYLLGIINDSVLAIILAVIPGTLGCFMDSILGAVFERKDLLTNEHVNLIATITGALIGILLV
>Mature_232_residues
MVEKLIMINWGYVLILFLLGFLTYKRKSLDALGSVVMIIMGVIIIFSAGFNWLLLILIFLILSLAATKFSKSYKKSLGEF
EGRRTSKNVISNGIVAVMMAAFGGYYLSFVGGFIGAIATATADTLASEIGVLHQPRLITTFKKVEPGTDGAVSVLGTVAG
MIGAAIVGICAYLLGIINDSVLAIILAVIPGTLGCFMDSILGAVFERKDLLTNEHVNLIATITGALIGILLV

Specific function: Unknown

COG id: COG1836

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM19 family [H]

Homologues:

Organism=Homo sapiens, GI21361720, Length=239, Percent_Identity=30.9623430962343, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002794 [H]

Pfam domain/function: PF01940 DUF92 [H]

EC number: NA

Molecular weight: Translated: 24610; Mature: 24610

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKLIMINWGYVLILFLLGFLTYKRKSLDALGSVVMIIMGVIIIFSAGFNWLLLILIFL
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ILSLAATKFSKSYKKSLGEFEGRRTSKNVISNGIVAVMMAAFGGYYLSFVGGFIGAIATA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TADTLASEIGVLHQPRLITTFKKVEPGTDGAVSVLGTVAGMIGAAIVGICAYLLGIINDS
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAIILAVIPGTLGCFMDSILGAVFERKDLLTNEHVNLIATITGALIGILLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVEKLIMINWGYVLILFLLGFLTYKRKSLDALGSVVMIIMGVIIIFSAGFNWLLLILIFL
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ILSLAATKFSKSYKKSLGEFEGRRTSKNVISNGIVAVMMAAFGGYYLSFVGGFIGAIATA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TADTLASEIGVLHQPRLITTFKKVEPGTDGAVSVLGTVAGMIGAAIVGICAYLLGIINDS
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAIILAVIPGTLGCFMDSILGAVFERKDLLTNEHVNLIATITGALIGILLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]