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The map label for this gene is rps3Ae

Identifier: 148642721

GI number: 148642721

Start: 640978

End: 641559

Strand: Reverse

Name: rps3Ae

Synonym: Msm_0661

Alternate gene names: 148642721

Gene position: 641559-640978 (Counterclockwise)

Preceding gene: 148642722

Following gene: 148642719

Centisome position: 34.62

GC content: 33.51

Gene sequence:

>582_bases
ATGGCAAAAGCAAAAGCAAGACGTAGAGTACGTGACACATGGAAAGAAAAATCTTGGTATACTATTAAAACACCAGTAAA
CTTTGAAGACAAAGAAATTGGAGAAACTCCAGCAAGAGACCCTGATTATCTCATCGGTAGGGGAGTAGAAGTTACTATGA
GGGAATTGTCTGGTGACTTTTCCAAACAATACATCAAACTCAGGTTTGAAATTGATAATGTAGCAGGAGATGTTGCAAAC
ACCAAATTTACTGGTCACAAAACTACTACTGATTATGTAAGAAGTATGATTAGAAGAGGAACCAGTAGAATCGATGCTTC
TTCTGTTGTTAAAACTAAAGATGATCGTAAAGTTAAACTTCATGTACTTGCAGTAACTACCAGAAGAGCTAAATCTTCCC
AACAAAAATACATGAGACAAGTTATCAATGATTTATTAGCTGAAACTGCAGCAGAAAAATCTTTCGATGAATTAATAAAA
CTTGTTGTTAACGGTAAATTAGCATCTGAAGTTTATCACAATGCTAAAAAAATCTACCCTCTTAAAAGAGTGGAAATTAT
CAAAAGTAAAGTATTAAACTAA

Upstream 100 bases:

>100_bases
CAGGTACGGTATTTGGTGGACTATTTTTAAATTTACTATAGCGATAGCTATATTTTTAACGATAATAAAATTTACGGAAA
AACTATAAAAGGTTGATATA

Downstream 100 bases:

>100_bases
ATACTTTTACTTATTTTTTTCATTTCATTATATCACAATGTTATATTTCATTGTAAAAAAATAATAAATTAAAACTCCAC
ATTCGGTACAGTTTTTTCAT

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAKAKARRRVRDTWKEKSWYTIKTPVNFEDKEIGETPARDPDYLIGRGVEVTMRELSGDFSKQYIKLRFEIDNVAGDVAN
TKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHVLAVTTRRAKSSQQKYMRQVINDLLAETAAEKSFDELIK
LVVNGKLASEVYHNAKKIYPLKRVEIIKSKVLN

Sequences:

>Translated_193_residues
MAKAKARRRVRDTWKEKSWYTIKTPVNFEDKEIGETPARDPDYLIGRGVEVTMRELSGDFSKQYIKLRFEIDNVAGDVAN
TKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHVLAVTTRRAKSSQQKYMRQVINDLLAETAAEKSFDELIK
LVVNGKLASEVYHNAKKIYPLKRVEIIKSKVLN
>Mature_192_residues
AKAKARRRVRDTWKEKSWYTIKTPVNFEDKEIGETPARDPDYLIGRGVEVTMRELSGDFSKQYIKLRFEIDNVAGDVANT
KFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHVLAVTTRRAKSSQQKYMRQVINDLLAETAAEKSFDELIKL
VVNGKLASEVYHNAKKIYPLKRVEIIKSKVLN

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family

Homologues:

Organism=Homo sapiens, GI4506723, Length=199, Percent_Identity=25.1256281407035, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323474, Length=207, Percent_Identity=29.4685990338164, Blast_Score=99, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6323577, Length=197, Percent_Identity=29.4416243654822, Blast_Score=95, Evalue=9e-21,
Organism=Drosophila melanogaster, GI17864162, Length=201, Percent_Identity=27.363184079602, Blast_Score=73, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS3A_METS3 (A5UKY8)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001273234.1
- STRING:   A5UKY8
- GeneID:   5217354
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0661
- eggNOG:   arNOG07959
- HOGENOM:   HBG402643
- OMA:   GHDTTRE
- ProtClustDB:   PRK04057
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00359
- InterPro:   IPR001593
- PANTHER:   PTHR11830

Pfam domain/function: PF01015 Ribosomal_S3Ae

EC number: NA

Molecular weight: Translated: 22195; Mature: 22064

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS01191 RIBOSOMAL_S3AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAKARRRVRDTWKEKSWYTIKTPVNFEDKEIGETPARDPDYLIGRGVEVTMRELSGDF
CCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCCCCCHHHCCCHHHHHHHHCCHH
SKQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKL
HHEEEEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEE
HVLAVTTRRAKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVNGKLASEVYHNAKKIYP
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
LKRVEIIKSKVLN
HHHHHHHHHHHCC
>Mature Secondary Structure 
AKAKARRRVRDTWKEKSWYTIKTPVNFEDKEIGETPARDPDYLIGRGVEVTMRELSGDF
CCHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCCCCCHHHCCCHHHHHHHHCCHH
SKQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKL
HHEEEEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEE
HVLAVTTRRAKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVNGKLASEVYHNAKKIYP
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
LKRVEIIKSKVLN
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA