| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is apgM
Identifier: 148642717
GI number: 148642717
Start: 637944
End: 639182
Strand: Reverse
Name: apgM
Synonym: Msm_0657
Alternate gene names: 148642717
Gene position: 639182-637944 (Counterclockwise)
Preceding gene: 148642718
Following gene: 148642716
Centisome position: 34.49
GC content: 36.4
Gene sequence:
>1239_bases ATGAAGGGAATAGTTTTAGTTATGGATGGTATGGGGGACCGTCCACTTAAAGAATTTGATAATCAAACCCCTCTCCAAGC AGCCAATACTCCGAATATGGATGAAATGGCTAAAAATGGTATAACTGGAATTATGGATTCAATAGCTCCGGGAATTATAC CTGGTAGTGACACTGCTCATTTGTCTATTTTAGGTTATGACCCTTACGAAGTATACACAGGAAGAGGCCCTTTTGAAGCG GCTGGTGTTGGAGTAGATGTTATTCCTGGAGATATTGCATTTAGGTGTAATTTCTCAACAGCTGATGAAAATGGTATAGT TACTGACAGACGTGCAGGAAGAATCAGAGAGGGAACTCATGAAATCGTTGAAGTGTTAAATACAATGGTTTTGGAAGATT ATCCTGATATTAAAATTATTTTTAAGGAATCAACTGGTCACAGAGCAGTTTTAGTATTAAGAGGTGAAGGTCTATCTGAT AAAGTAAGTGATGCTGATCCTAAAGTGGAAGGAAACAAACCTAAAGAAGTTATACCTTTAGATGATTCAGTTGAAGCTAA AAAAACTGCAGATATTTTAAATAAATTGGTAGTTAAATCTTATGAAATGATTAAAGACCATCCTGTTAATTTGGAAAGAA TAGAAAACAATGAACCTCCTGCAAATATTATAATTCCACGTGGTGCAGGTGAAGTTCCGGTTGTAGAAGCTTTAAATGAC AAATATGAAGTTAATTCTGCATGTATTGCTGAAACTGGTCTTATTATGGGAATAGGAAGATTTGCCGGTATGGATATTAT TGAAATGGAAGATGTTACTGGTGGAATTGACACCAATTTGGAAAATATCAGAGACACAATTATTGACCAGGTTAAAAATT CAGACCATGACTTTTTCCTGATAAATATTGATGGGGCAGATGAAGCAGGTCATGACGGGCAGGCTGTTGAAAAACGTGAC TTCATTGAAAAAGTTGACAGGGTTGTTATGAGTGAACTTAAAAAACTTGAAGATGTTTATATTTTCTTGACTGCTGATCA TTCAACTCCAATTTCTGTTTTAAACCACTCAGGAGATCCTGTGCCGGTTATTATTACAGGACCTGAAGTAAGAGTGGATG ATGTTTGTGAATACTCTGAAGTAGCTGTTGCAAAAGGAGGGCTTTGCAGAATTAGAGGAGCAGACGTTATGAACATCATG ATGGATTTAATGAACTATGCTCATAAGTTTGGAGCTTAA
Upstream 100 bases:
>100_bases TTTTAATTAAACCTTTAATAGGTTTCTAAAATCTGATTTTTTTAAATAATTTTATAACTATTGAAAAATATATTTAAAAG TATTATATTAAGGTGACATT
Downstream 100 bases:
>100_bases AAGAGTTGATTCAATGGCTGTTAAAAAACTGTTCGGAACTTCTGGAATTCGGGGGAAAATAAATTCTGAAGTTACATGTG AACTTGCATTAAATGTCGGT
Product: cofactor-independent phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; aPGAM
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MKGIVLVMDGMGDRPLKEFDNQTPLQAANTPNMDEMAKNGITGIMDSIAPGIIPGSDTAHLSILGYDPYEVYTGRGPFEA AGVGVDVIPGDIAFRCNFSTADENGIVTDRRAGRIREGTHEIVEVLNTMVLEDYPDIKIIFKESTGHRAVLVLRGEGLSD KVSDADPKVEGNKPKEVIPLDDSVEAKKTADILNKLVVKSYEMIKDHPVNLERIENNEPPANIIIPRGAGEVPVVEALND KYEVNSACIAETGLIMGIGRFAGMDIIEMEDVTGGIDTNLENIRDTIIDQVKNSDHDFFLINIDGADEAGHDGQAVEKRD FIEKVDRVVMSELKKLEDVYIFLTADHSTPISVLNHSGDPVPVIITGPEVRVDDVCEYSEVAVAKGGLCRIRGADVMNIM MDLMNYAHKFGA
Sequences:
>Translated_412_residues MKGIVLVMDGMGDRPLKEFDNQTPLQAANTPNMDEMAKNGITGIMDSIAPGIIPGSDTAHLSILGYDPYEVYTGRGPFEA AGVGVDVIPGDIAFRCNFSTADENGIVTDRRAGRIREGTHEIVEVLNTMVLEDYPDIKIIFKESTGHRAVLVLRGEGLSD KVSDADPKVEGNKPKEVIPLDDSVEAKKTADILNKLVVKSYEMIKDHPVNLERIENNEPPANIIIPRGAGEVPVVEALND KYEVNSACIAETGLIMGIGRFAGMDIIEMEDVTGGIDTNLENIRDTIIDQVKNSDHDFFLINIDGADEAGHDGQAVEKRD FIEKVDRVVMSELKKLEDVYIFLTADHSTPISVLNHSGDPVPVIITGPEVRVDDVCEYSEVAVAKGGLCRIRGADVMNIM MDLMNYAHKFGA >Mature_412_residues MKGIVLVMDGMGDRPLKEFDNQTPLQAANTPNMDEMAKNGITGIMDSIAPGIIPGSDTAHLSILGYDPYEVYTGRGPFEA AGVGVDVIPGDIAFRCNFSTADENGIVTDRRAGRIREGTHEIVEVLNTMVLEDYPDIKIIFKESTGHRAVLVLRGEGLSD KVSDADPKVEGNKPKEVIPLDDSVEAKKTADILNKLVVKSYEMIKDHPVNLERIENNEPPANIIIPRGAGEVPVVEALND KYEVNSACIAETGLIMGIGRFAGMDIIEMEDVTGGIDTNLENIRDTIIDQVKNSDHDFFLINIDGADEAGHDGQAVEKRD FIEKVDRVVMSELKKLEDVYIFLTADHSTPISVLNHSGDPVPVIITGPEVRVDDVCEYSEVAVAKGGLCRIRGADVMNIM MDLMNYAHKFGA
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG3635
COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APGM_METS3 (A5UKY4)
Other databases:
- EMBL: CP000678 - RefSeq: YP_001273230.1 - ProteinModelPortal: A5UKY4 - SMR: A5UKY4 - STRING: A5UKY4 - GeneID: 5216097 - GenomeReviews: CP000678_GR - KEGG: msi:Msm_0657 - eggNOG: arNOG04733 - HOGENOM: HBG463247 - OMA: DIAFRCN - ProtClustDB: PRK04024 - GO: GO:0006096 - HAMAP: MF_01402_A - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR004456 - InterPro: IPR006124 - Gene3D: G3DSA:3.40.720.10 - PIRSF: PIRSF006392 - TIGRFAMs: TIGR00306
Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase; SSF53649 Alkaline_phosphatase_core
EC number: =5.4.2.1
Molecular weight: Translated: 44904; Mature: 44904
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIVLVMDGMGDRPLKEFDNQTPLQAANTPNMDEMAKNGITGIMDSIAPGIIPGSDTAH CCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCE LSILGYDPYEVYTGRGPFEAAGVGVDVIPGDIAFRCNFSTADENGIVTDRRAGRIREGTH EEEEECCCEEEECCCCCCHHCCCCEEEECCCEEEEEECCCCCCCCCEECCCCCCCCCCHH EIVEVLNTMVLEDYPDIKIIFKESTGHRAVLVLRGEGLSDKVSDADPKVEGNKPKEVIPL HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECC DDSVEAKKTADILNKLVVKSYEMIKDHPVNLERIENNEPPANIIIPRGAGEVPVVEALND CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCCCCHHHHCCC KYEVNSACIAETGLIMGIGRFAGMDIIEMEDVTGGIDTNLENIRDTIIDQVKNSDHDFFL CCCCCCHHHHHCCHHEEHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE INIDGADEAGHDGQAVEKRDFIEKVDRVVMSELKKLEDVYIFLTADHSTPISVLNHSGDP EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHCCCCCCC VPVIITGPEVRVDDVCEYSEVAVAKGGLCRIRGADVMNIMMDLMNYAHKFGA EEEEEECCCCCHHHHHCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKGIVLVMDGMGDRPLKEFDNQTPLQAANTPNMDEMAKNGITGIMDSIAPGIIPGSDTAH CCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCE LSILGYDPYEVYTGRGPFEAAGVGVDVIPGDIAFRCNFSTADENGIVTDRRAGRIREGTH EEEEECCCEEEECCCCCCHHCCCCEEEECCCEEEEEECCCCCCCCCEECCCCCCCCCCHH EIVEVLNTMVLEDYPDIKIIFKESTGHRAVLVLRGEGLSDKVSDADPKVEGNKPKEVIPL HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECC DDSVEAKKTADILNKLVVKSYEMIKDHPVNLERIENNEPPANIIIPRGAGEVPVVEALND CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCCCCHHHHCCC KYEVNSACIAETGLIMGIGRFAGMDIIEMEDVTGGIDTNLENIRDTIIDQVKNSDHDFFL CCCCCCHHHHHCCHHEEHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE INIDGADEAGHDGQAVEKRDFIEKVDRVVMSELKKLEDVYIFLTADHSTPISVLNHSGDP EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHCCCCCCC VPVIITGPEVRVDDVCEYSEVAVAKGGLCRIRGADVMNIMMDLMNYAHKFGA EEEEEECCCCCHHHHHCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA