| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is glmM [H]
Identifier: 148642716
GI number: 148642716
Start: 636593
End: 637966
Strand: Reverse
Name: glmM [H]
Synonym: Msm_0656
Alternate gene names: 148642716
Gene position: 637966-636593 (Counterclockwise)
Preceding gene: 148642717
Following gene: 148642715
Centisome position: 34.43
GC content: 36.61
Gene sequence:
>1374_bases ATGCTCATAAGTTTGGAGCTTAAAAGAGTTGATTCAATGGCTGTTAAAAAACTGTTCGGAACTTCTGGAATTCGGGGGAA AATAAATTCTGAAGTTACATGTGAACTTGCATTAAATGTCGGTAAATCATTAGCTTGTTATTTGGGTAATGAGGGAACGG TAGTTTTAGGTTATGATACAAGAACTACTAATGTGATGCTTGACCAGGCTATTTGTGCAGGTTTGCTTGAAAGCGGAGTA GATGTAATTAAAATAGGAATGGTTCCAACTCCTTTGGTAGGTTATGCTACTGATAAATTAGGTGCTGATGCTGGAGTAAT GCTGACTGCATCACATAATCCTTCACAGTACAATGGAATTAAAATTTGGAATGCTAACGGAATGGCATACACTTCAGCTC AGGAAGCTAAAATTGAAGAAATCTACTCAAATGAATCTTACACTTCAGTAAGCTGGGATAAAGTAGGTAGCTTAAGAGTT AATGAGGAAATTAAAGGAAGATATATTGATGATCTGGTAGGTATGGTAAATATTAAGCCAGGTTTAAAGGTTGTCATTGA TTGTGCTTCAGGGGCAGGAAGTGAAATATCTCCTTTGGTATTTAGAAAAGCGGGCTGTGAGGTAACAACTCTTAATTCTC AGCCGGACGGTTTTTTCCCAGGAAGAAATCCTGAACCGAATGCAGAAAACCTGCAAAATCTGATGAAAACTGTAGTAGCC ATTGGTGCAGACCTTGGAATTGCACACGACGGAGATGCAGACAGAATGATTACAATTGATGAAAATGGTGATATTTCCCC ATTCGACTCTTTACTTGCATTAATGTCTAAAGAATTTGACGGAGACATAGTCACTACTGTAGATGCAGGTTTATGTATGG ATGAATCTGTAAAAGGTAATGTTTTAAGAACTAAAGTCGGAGATGTAAATGTAGCTGAAGTCATAATAGAAAAAGATGCT GCATTTGGAGGGGAACCTTCCGGAACCTGGCTGCATCCTGATTTTTGTATGTGTCCTGACGGCATACTTTCAGGTTTAAG GATGGCTGAACTTGTATCAAACAAAGGCAAATTGTCCGAATTGCTCTTAGAGATTCCGTCTTACCCAAATATTCGTGAAA AAATAATCTGTTCTAAAGAAGCCAAAACAGCCGTTATGGAAAATATGGAAGATTTATTAAAAGACAGTTTTGATGATATT AAGGAAATTAATTCTATTGACGGAGTCAGATTAACTTTCAATGATGATAGCTGGGTTTTAGTAAGGCCTTCAGGAACTGA AGATTATATTAGAATAACTTTAGAGTCTAAAGACAGCACAAAAGCTCAAGCCATTAAAGAAACATGTGTTAAAATCATAA AAGAAAATATTTAA
Upstream 100 bases:
>100_bases GATGATGTTTGTGAATACTCTGAAGTAGCTGTTGCAAAAGGAGGGCTTTGCAGAATTAGAGGAGCAGACGTTATGAACAT CATGATGGATTTAATGAACT
Downstream 100 bases:
>100_bases ATTCTTTTTCATGCAGCGGATTACTGCATGTTTTTTTTAATCTTCTTTTTTTCAATTAAAAAAATTAATTAATAAGTATA AACTTAACATATTATAATAG
Product: phosphomannomutase, ManB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MLISLELKRVDSMAVKKLFGTSGIRGKINSEVTCELALNVGKSLACYLGNEGTVVLGYDTRTTNVMLDQAICAGLLESGV DVIKIGMVPTPLVGYATDKLGADAGVMLTASHNPSQYNGIKIWNANGMAYTSAQEAKIEEIYSNESYTSVSWDKVGSLRV NEEIKGRYIDDLVGMVNIKPGLKVVIDCASGAGSEISPLVFRKAGCEVTTLNSQPDGFFPGRNPEPNAENLQNLMKTVVA IGADLGIAHDGDADRMITIDENGDISPFDSLLALMSKEFDGDIVTTVDAGLCMDESVKGNVLRTKVGDVNVAEVIIEKDA AFGGEPSGTWLHPDFCMCPDGILSGLRMAELVSNKGKLSELLLEIPSYPNIREKIICSKEAKTAVMENMEDLLKDSFDDI KEINSIDGVRLTFNDDSWVLVRPSGTEDYIRITLESKDSTKAQAIKETCVKIIKENI
Sequences:
>Translated_457_residues MLISLELKRVDSMAVKKLFGTSGIRGKINSEVTCELALNVGKSLACYLGNEGTVVLGYDTRTTNVMLDQAICAGLLESGV DVIKIGMVPTPLVGYATDKLGADAGVMLTASHNPSQYNGIKIWNANGMAYTSAQEAKIEEIYSNESYTSVSWDKVGSLRV NEEIKGRYIDDLVGMVNIKPGLKVVIDCASGAGSEISPLVFRKAGCEVTTLNSQPDGFFPGRNPEPNAENLQNLMKTVVA IGADLGIAHDGDADRMITIDENGDISPFDSLLALMSKEFDGDIVTTVDAGLCMDESVKGNVLRTKVGDVNVAEVIIEKDA AFGGEPSGTWLHPDFCMCPDGILSGLRMAELVSNKGKLSELLLEIPSYPNIREKIICSKEAKTAVMENMEDLLKDSFDDI KEINSIDGVRLTFNDDSWVLVRPSGTEDYIRITLESKDSTKAQAIKETCVKIIKENI >Mature_457_residues MLISLELKRVDSMAVKKLFGTSGIRGKINSEVTCELALNVGKSLACYLGNEGTVVLGYDTRTTNVMLDQAICAGLLESGV DVIKIGMVPTPLVGYATDKLGADAGVMLTASHNPSQYNGIKIWNANGMAYTSAQEAKIEEIYSNESYTSVSWDKVGSLRV NEEIKGRYIDDLVGMVNIKPGLKVVIDCASGAGSEISPLVFRKAGCEVTTLNSQPDGFFPGRNPEPNAENLQNLMKTVVA IGADLGIAHDGDADRMITIDENGDISPFDSLLALMSKEFDGDIVTTVDAGLCMDESVKGNVLRTKVGDVNVAEVIIEKDA AFGGEPSGTWLHPDFCMCPDGILSGLRMAELVSNKGKLSELLLEIPSYPNIREKIICSKEAKTAVMENMEDLLKDSFDDI KEINSIDGVRLTFNDDSWVLVRPSGTEDYIRITLESKDSTKAQAIKETCVKIIKENI
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI31377548, Length=291, Percent_Identity=29.8969072164948, Blast_Score=76, Evalue=6e-14, Organism=Escherichia coli, GI1788361, Length=470, Percent_Identity=29.5744680851064, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1789566, Length=458, Percent_Identity=30.1310043668122, Blast_Score=166, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71993870, Length=280, Percent_Identity=24.2857142857143, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71993878, Length=285, Percent_Identity=23.859649122807, Blast_Score=75, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323934, Length=296, Percent_Identity=30.0675675675676, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 49370; Mature: 49370
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISLELKRVDSMAVKKLFGTSGIRGKINSEVTCELALNVGKSLACYLGNEGTVVLGYDT CEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECC RTTNVMLDQAICAGLLESGVDVIKIGMVPTPLVGYATDKLGADAGVMLTASHNPSQYNGI CCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCE KIWNANGMAYTSAQEAKIEEIYSNESYTSVSWDKVGSLRVNEEIKGRYIDDLVGMVNIKP EEECCCCEEECCHHHHHHHHHHCCCCCCEECHHCCCCEEECHHHCCCCHHHHHHHEECCC GLKVVIDCASGAGSEISPLVFRKAGCEVTTLNSQPDGFFPGRNPEPNAENLQNLMKTVVA CCEEEEEECCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH IGADLGIAHDGDADRMITIDENGDISPFDSLLALMSKEFDGDIVTTVDAGLCMDESVKGN HCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC VLRTKVGDVNVAEVIIEKDAAFGGEPSGTWLHPDFCMCPDGILSGLRMAELVSNKGKLSE EEEEECCCCCHHHEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCHHHH LLLEIPSYPNIREKIICSKEAKTAVMENMEDLLKDSFDDIKEINSIDGVRLTFNDDSWVL HHHHCCCCCCHHHHHEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCEEE VRPSGTEDYIRITLESKDSTKAQAIKETCVKIIKENI EECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLISLELKRVDSMAVKKLFGTSGIRGKINSEVTCELALNVGKSLACYLGNEGTVVLGYDT CEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECC RTTNVMLDQAICAGLLESGVDVIKIGMVPTPLVGYATDKLGADAGVMLTASHNPSQYNGI CCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCE KIWNANGMAYTSAQEAKIEEIYSNESYTSVSWDKVGSLRVNEEIKGRYIDDLVGMVNIKP EEECCCCEEECCHHHHHHHHHHCCCCCCEECHHCCCCEEECHHHCCCCHHHHHHHEECCC GLKVVIDCASGAGSEISPLVFRKAGCEVTTLNSQPDGFFPGRNPEPNAENLQNLMKTVVA CCEEEEEECCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH IGADLGIAHDGDADRMITIDENGDISPFDSLLALMSKEFDGDIVTTVDAGLCMDESVKGN HCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC VLRTKVGDVNVAEVIIEKDAAFGGEPSGTWLHPDFCMCPDGILSGLRMAELVSNKGKLSE EEEEECCCCCHHHEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCHHHH LLLEIPSYPNIREKIICSKEAKTAVMENMEDLLKDSFDDIKEINSIDGVRLTFNDDSWVL HHHHCCCCCCHHHHHEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCEEE VRPSGTEDYIRITLESKDSTKAQAIKETCVKIIKENI EECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA